BAC Information

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BAC

Clone NameB6Ng01-037K09
Chromosome14 (Build37)
Map Location 86,671,500 - 86,799,332
singlet/doubletdoublet
Overlap geneLOC100043306, LOC100043778
Upstream geneLOC668603, LOC100043301, EG629815
Downstream geneLOC100043310, LOC100043311, Diap3, EG665324
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037K09.bB6Ng01-037K09.g
ACCDH865444DH865445
length918608
definitionDH865444|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K09, 5' end.DH865445|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,671,500 - 86,672,414)(86,798,736 - 86,799,332)
sequence
gaattcattcttctcagcgaagcttgtaataaatgttaggcaaaggcaag
ttcaatgtgactccggaagacaggaagcagcggtgcagattgtatctgtt
gacagttttaatgtcaagctgtgtgtgcaaatgatattttgtaaggtttg
ggaagtcacaaccatcagttagatttcagcagcaagatatactatcgttc
tttgaggcaaaagtggaaaatagtagcaagttgtaaagaaaaacgaaaat
gggctataaagacgggagagtcttttgagttagggagcagagaaagtggg
ataaaatgttgatttcttggcattttgtgcacgagcgaccgatcaactag
aattatcacaaggactatctaaatttacatcagtacaagctgcacagctt
caaagcctggctttcagggcaggcatgcttaggttttattatcagctcag
tcctcaactatgacatagcacatacttaacatccccacagtctgctttca
ttagtttaaaaattgagtaaaattatcaccatctcgtgagcccggtataa
aaaagaaacgtgataaatacatatttggtgttgatttaatacagtggttt
tcaatatatttgtgattctccttcttccaaaggggacatgagaatgtcta
gagatacatttttttgtcattccagggacagatggcagggaagtggctgg
tactggtatctaatgaggagaggccagggatgctgctaaacctcctaaat
ccacaatacattactctacaatagggaatcatcaatccctaatgtcaata
atactgctgtcagtagtggagacagagcctggattagggtcatgggtata
tgtttttagctgttattgtcatgagcattcaacatcatatttagcatttt
ctcctctatccttcaccc
gaattccgaataagggacagggtggagagaccctaaatagaaaattactg
atagaaagcctcaaggagaagggttcgggattcctgactgaacatacagg
actcttgttgagcatgggctaagataaccagggtgatcagacacagaaga
agggggaatcctagctcagctgagtgatggagagaccaactctcaacccg
aggacctagttaagaagaaagctcagagagcctggtgtgagtttgaccaa
ggagagtatctttgacttaatacaactcttcaaacttctaccaagtcttt
tctgctgctaccttaagagattaagaaataggtagaaatcaatcattatt
ggtgtgtctacgttgtcacgaattgatgtaaacgagaatcagattgagag
acaaggcacccccagaataaaataattaaatgctgaagtcagactgtgcc
ctgatctaatctgagttaacttattccatatggtaaaatagttcttttca
ggctgtgccttgccctgagagactccactgtacaaccaactattgacttc
acattgaggacaatgattctgcacttgggtggggatatgaagggcactat
ctgtctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86671500_86672414
seq2: B6Ng01-037K09.b_44_961

seq1  GAATTCATTCTTCTCAGCGAAGCTTGTAATAAATGTTAGGCAAAGGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTCTCAGCGAAGCTTGTAATAAATGTTAGGCAAAGGCAAG  50

seq1  TTCAATGTGACTCCGGAAGACAGGAAGCAGCGGTGCAGATTGTATCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTGACTCCGGAAGACAGGAAGCAGCGGTGCAGATTGTATCTGTT  100

seq1  GACAGTTTTAATGTCAAGCTGTGTGTGCAAATGATATTTTGTAAGGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTTTAATGTCAAGCTGTGTGTGCAAATGATATTTTGTAAGGTTTG  150

seq1  GGAAGTCACAACCATCAGTTAGATTTCAGCAGCAAGATATACTATCGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCACAACCATCAGTTAGATTTCAGCAGCAAGATATACTATCGTTC  200

seq1  TTTGAGGCAAAAGTGGAAAATAGTAGCAAGTTGTAAAGAAAAACGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCAAAAGTGGAAAATAGTAGCAAGTTGTAAAGAAAAACGAAAAT  250

seq1  GGGCTATAAAGACGGGAGAGTCTTTTGAGTTAGGGAGCAGAGAAAGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATAAAGACGGGAGAGTCTTTTGAGTTAGGGAGCAGAGAAAGTGGG  300

seq1  ATAAAATGTTGATTTCTTGGCATTTTGTGCACGAGCGACCGATCAACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTTGATTTCTTGGCATTTTGTGCACGAGCGACCGATCAACTAG  350

seq1  AATTATCACAAGGACTATCTAAATTTACATCAGTACAAGCTGCACAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCACAAGGACTATCTAAATTTACATCAGTACAAGCTGCACAGCTT  400

seq1  CAAAGCCTGGCTTTCAGGGCAGGCATGCTTAGGTTTTATTATCAGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTGGCTTTCAGGGCAGGCATGCTTAGGTTTTATTATCAGCTCAG  450

seq1  TCCTCAACTATGACATAGCACATACTTAACATCCCCACAGTCTGCTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAACTATGACATAGCACATACTTAACATCCCCACAGTCTGCTTTCA  500

seq1  TTAGTTTAAAAATTGAGTAAAATTATCACCATCTCGTGAGCCCGGTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAAAAATTGAGTAAAATTATCACCATCTCGTGAGCCCGGTATAA  550

seq1  AAAAGAAACGTGATAAATACATATTTGGTGTTGATTTAATACAGTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACGTGATAAATACATATTTGGTGTTGATTTAATACAGTGGTTT  600

seq1  TCAATATA-TTGTGATTCTCCTTCTTCCAAAGGGGACATGAGAATGTCTA  649
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATATTTGTGATTCTCCTTCTTCCAAAGGGGACATGAGAATGTCTA  650

seq1  GAGATACA-TTTTTTGTCATTCCAGGGACAGATGGCAGGGAAGTGGCTGG  698
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACATTTTTTTGTCATTCCAGGGACAGATGGCAGGGAAGTGGCTGG  700

seq1  TACTGGTATCTAATGAGGAGAGGCCAGGGATGCTGCTAAGCCTCCTAAAT  748
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TACTGGTATCTAATGAGGAGAGGCCAGGGATGCTGCTAAACCTCCTAAAT  750

seq1  CCACAATACATTACTCTACAATAGGGAATCATCAATCCCTAATGTCAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATACATTACTCTACAATAGGGAATCATCAATCCCTAATGTCAATA  800

seq1  ATACTGCTGTCAGTAGTGGAGACAGAGCCTGGATTAGGGGTCATGGGTAT  848
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATACTGCTGTCAGTAGTGGAGACAGAGCCTGGATTA-GGGTCATGGGTAT  849

seq1  ATG-TTTTAGCTGTTA-TGTCATGAGCATTCAACAGCATATTTAGCATTT  896
      ||| |||||||||||| |||||||||||||||||| ||||||||||||||
seq2  ATGTTTTTAGCTGTTATTGTCATGAGCATTCAACATCATATTTAGCATTT  899

seq1  TCTCCTCTATCCTTCACCC  915
      |||||||||||||||||||
seq2  TCTCCTCTATCCTTCACCC  918

seq1: chr14_86798736_86799332
seq2: B6Ng01-037K09.g_81_677 (reverse)

seq1  CCAGACAGATAGTGCCCTTCATATCCCCACCCAAGTGCAGAATCATTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAGATAGTGCCCTTCATATCCCCACCCAAGTGCAGAATCATTGTC  50

seq1  CTCAATGTGAAGTCAATAGTTGGTTGTACAGTGGAGTCTCTCAGGGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTGAAGTCAATAGTTGGTTGTACAGTGGAGTCTCTCAGGGCAAG  100

seq1  GCACAGCCTGAAAAGAACTATTTTACCATATGGACTAAGTTAACTCAGAT  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCACAGCCTGAAAAGAACTATTTTACCATATGGAATAAGTTAACTCAGAT  150

seq1  TAGATCAGGGCACAGTCTGACTTCAGCATTTAATTATTTTATTCTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGGGCACAGTCTGACTTCAGCATTTAATTATTTTATTCTGGGGG  200

seq1  TGCCTTGTCTCTCAATCTGATTCTCGTTTACATCAATTCGTGACAACGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGTCTCTCAATCTGATTCTCGTTTACATCAATTCGTGACAACGTA  250

seq1  GACACACCAATAATGATTGATTTCTACCTATTTCTTAATCTCTTAAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACCAATAATGATTGATTTCTACCTATTTCTTAATCTCTTAAGGTA  300

seq1  GCAGCAGAAAAGACTTGGTAGAAGTTTGAAGAGTTGTATTAAGTCAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAAAAGACTTGGTAGAAGTTTGAAGAGTTGTATTAAGTCAAAGA  350

seq1  TACTCTCCTTGGTCAAACTCACACCAGGCTCTCTGAGCTTTCTTCTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCCTTGGTCAAACTCACACCAGGCTCTCTGAGCTTTCTTCTTAAC  400

seq1  TAGGTCCTCGGGTTGAGAGTTGGTCTCTCCATCACTCAGCTGAGCTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCTCGGGTTGAGAGTTGGTCTCTCCATCACTCAGCTGAGCTAGGA  450

seq1  TTCCCCCTTCTTCTGTGTCTGATCACCCTGGTTATCTTAGCCCATGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTTCTTCTGTGTCTGATCACCCTGGTTATCTTAGCCCATGCTCA  500

seq1  ACAAGAGTCCTGTATGTTCAGTCAGGAATCCCGAACCCTTCTCCTTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTCCTGTATGTTCAGTCAGGAATCCCGAACCCTTCTCCTTGAGG  550

seq1  CTTTCTCTCAGTAATTTTCTATTTAGGGTCTCTCCACCCTGTCCCTT  597
      |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATCAGTAATTTTCTATTTAGGGTCTCTCCACCCTGTCCCTT  597