BAC Information

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BAC

Clone NameB6Ng01-037L08
Chromosome14 (Build37)
Map Location 4,616,626 - 4,617,872
singlet/doubletsinglet
Overlap geneLOC100041162
Upstream geneLOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177
Downstream geneLOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037L08.bB6Ng01-037L08.g
ACCDH865486DH865487
length1,2291,217
definitionDH865486|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L08, 5' end.DH865487|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccagctttggaaggagaggttgccaaaggggatcccacgggtc
catgagaggctccaggagaggcaccccagaaaaggaccaagctgggcaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggttcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaacagagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatggttatggagaagg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccttccaggagtaggtcttacaagatgaagccttggactttg
tcaatgtcagacaaagagtcaagaatttctgatgatgagtttgacagagc
caggaattgacaaacctgcagctacttttctgggatctatttaatttcat
tttgagtagcaaaaaatgtcaggagtgggcactatgagaataacagtgtg
tcctttcatggaagggagttgaagcacttcatcttccagattactgtagg
taacttgagtctctgatgaaaagaacagagaaggatgctcccctggtcat
gtcatgtggtgaggactcagacactttggatttgaagacacacgattaat
tagtgcttgatagtgctaagcactatgaacttcaggatttccctgcgtcc
catctgatatgacctgacaatgttccccatatctttatgtctgaggcagc
ttatacattttcaaggcaaccgggcctgttacagggagtgtggcatatgt
ctgacatggtggttaggaagagacatagcttagcaaaccagctggaagat
agcttttctgctcttttaggatcactgtctttatcttttctctccctcca
tctttcttcttgggactcagaatgtctcccctgcccctgggcatcaagta
tgcaatttctttttggtttacctatctgccagggtcttgctagaatactt
caccgaaattcccaatgactagagagttccaagtagtggtacttaagaac
tgaattgattgaagatcgcaatgacattg
gaattccacataaaaccagagaccatgaaacttatagaggagaaagtggg
gaaaagcatagaagatatgggcacagggggaaagttcctgaatagaacag
caatggcttgtgctgtaagattgagaatagacaaatgggacctcatgaaa
ctgcaaagcttctgtaaagcaaaagacaccgtcaataagacaaaaaggcc
accaataggttgggaaaggttctttacctatcccaaatcggatagaggac
taataacgaatatgtataaagaacacaagaaggtggactttagaaaatcc
aataaccccattaaaaagtggggctcagagctaaacaaagaattgtcacc
tgaggaataccgaatggcagagaagcacttgaaaaatgttcagcatcctt
aatcatcagggaaatgcaaatcaaaacaaccctgagattctacttcacac
cagtcagaatggctaagatcaaaaattctggtgacagcagatgctggcaa
ggatgtggagaaagaggaacatttctccgttgttggtgggattgcaagct
tgtacaaccactctggaaatcagtctggcagttcttcagaaaattggaca
taggactactggaggatcccagaataccactcctgggcatatatcaagaa
gatgttccaactggtaagaaggacacatgctccactatgttcatagcagc
cttatttattatagccagaagctggaaagaacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatttacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggttggacct
ggaggtagcatcatactgagtggggtaacccaatcacaaagaattcacat
gatatgtactcactggtaagtggatattatccaggaaacttagataccca
agatatgagaacaattgcaaaaccacagaaactcagaggactagaccaag
gtgtggacactttggccccttcttataatgggaacaaaaccccagaagga
gttacggagaacaaatttggaggtggataggaaggatggtatcatctaga
actgccatagatggatgctcacagtcagctattggatgatccatggccgc
atgggaggagcctgagaagtccagggacctaggatctgtcaccttatagg
tggaaacaaatttgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4616626_4617872
seq2: B6Ng01-037L08.b_48_1276

seq1  GAATTCTCCAGCTTTGGAAGGAGAGGTTGCCAAAGGGGATCCCACGGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGCTTTGGAAGGAGAGGTTGCCAAAGGGGATCCCACGGGTC  50

seq1  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGCTGGGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGCTGGGCAGA  100

seq1  ACTAGTTAACAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAACAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150

seq1  CCTTCCTTGGAGAATCTCTTGTATCTAGGAGAGAACTAGAATCTTCTGTG  200
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200

seq1  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250

seq1  TTTGCTCTGGGTTCACCAGCAGGAATGTTTTCCTGGCTGCTCAGGCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTGGGTTCACCAGCAGGAATGTTTTCCTGGCTGCTCAGGCTATT  300

seq1  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGAAGGAAG  350

seq1  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATGGTTCTGGAGAAGG  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATGGTTATGGAGAAGG  400

seq1  CACAGTGAGTCCTGGGCAGAGTTGGGGAACTTCCTGGTAGAGGTAGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGTCCTGGGCAGAGTTGGGGAACTTCCTGGTAGAGGTAGGCTT  450

seq1  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGATGAAGCCTTGGACTTTG  500

seq1  CCAATGTCAGAAAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGC  550
       |||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  TCAATGTCAGACAAAGAGTCAAGAATTTCTGATGATGAGTTTGACAGAGC  550

seq1  CAGGAATTGACAAACCTGCAGCTACTTTTCTGGGAGCTATTTAATTTCAT  600
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGGAATTGACAAACCTGCAGCTACTTTTCTGGGATCTATTTAATTTCAT  600

seq1  TTTGAGTGGCAAAAAATGTCAGGAGTGGGCACTATGAGAATAACAGTGTG  650
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTAGCAAAAAATGTCAGGAGTGGGCACTATGAGAATAACAGTGTG  650

seq1  TCCTTTCATGGAAGGGAGTTGAAGCACTTCATCTTCCAGATTACTGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATGGAAGGGAGTTGAAGCACTTCATCTTCCAGATTACTGTAGG  700

seq1  TAACTTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCAT  750

seq1  GTCATGTGGTGAGGACTCAGACACTTTGGATTTGAAGACACACGATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGGTGAGGACTCAGACACTTTGGATTTGAAGACACACGATTAAT  800

seq1  TAGTGCTTGATAGTGCTAAGCACTATGAACTTCAGCATTTCCCTGCGTCC  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGTGCTTGATAGTGCTAAGCACTATGAACTTCAGGATTTCCCTGCGTCC  850

seq1  CATCTGATATGACCTGACAATGTTCCCCATATCTTTATGTCTGAGGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATATGACCTGACAATGTTCCCCATATCTTTATGTCTGAGGCAGC  900

seq1  TTATACA-TTTCAAGGCAACCGGGCCTGTAACAGGGAGTGTGGCATATGT  949
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  TTATACATTTTCAAGGCAACCGGGCCTGTTACAGGGAGTGTGGCATATGT  950

seq1  CTGACAATGGTGGTTAGGAAGAGGAACATAGCTTAGCAAACCAGCTGGAA  999
      ||||| |||||||||||||||||  |||||||||||||||||||||||||
seq2  CTGAC-ATGGTGGTTAGGAAGAG--ACATAGCTTAGCAAACCAGCTGGAA  997

seq1  GATAGCTTTTCTGCTCTTTTAGGAATTCACTGTCTTTATCTCTTCTCTCC  1049
      ||||||||||||||||||||||||  ||||||||||||||| ||||||||
seq2  GATAGCTTTTCTGCTCTTTTAGGA--TCACTGTCTTTATCTTTTCTCTCC  1045

seq1  CTCCATC-TTCTTCTTGGGACTCAGAATGGTCTCCCCTGCCCCTGGGCCA  1098
      ||||||| |||||||||||||||||||| |||||||||||||||||| ||
seq2  CTCCATCTTTCTTCTTGGGACTCAGAAT-GTCTCCCCTGCCCCTGGG-CA  1093

seq1  TCAAGTATGCAAATTCTTTTGTGTTTACCTATCTG-CAGGGTC-TGCTAG  1146
      |||||||||||| |||||||  ||||||||||||| ||||||| ||||||
seq2  TCAAGTATGCAATTTCTTTTTGGTTTACCTATCTGCCAGGGTCTTGCTAG  1143

seq1  AAATACTTCAACCCAAAATTCCAAAATGACTAAGAAGAGATCAAAAATAA  1196
       |||||||||  || |||||||  ||||||||   |||| ||  || || 
seq2  -AATACTTCA--CCGAAATTCC-CAATGACTA--GAGAGTTC-CAAGTAG  1186

seq1  ATGAACTAGAAGAACTGAAATTGGATATGAGGAAGATCAGCAATGACATT  1246
        | |||  ||||||||||  | |||     ||||||| |||||||||||
seq2  TGGTACT-TAAGAACTGAA--TTGAT----TGAAGATC-GCAATGACATT  1228

seq1  G  1247
      |
seq2  G  1229