BAC Information

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BAC

Clone NameB6Ng01-037O23
Chromosome14 (Build37)
Map Location 27,889,950 - 28,042,161
singlet/doubletdoublet
Overlap geneIl17rd, LOC665333
Upstream geneLOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1
Downstream geneArhgef3, LOC100040147, Ccdc66, LOC665370, Erc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037O23.bB6Ng01-037O23.g
ACCDH865653DH865654
length913961
definitionDH865653|Mus musculus domesticus DNA, BAC clone: B6Ng01-037O23, 5' end.DH865654|Mus musculus domesticus DNA, BAC clone: B6Ng01-037O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,889,950 - 27,890,857)(28,041,205 - 28,042,161)
sequence
gaattcccactgggagtggccagatacagtttctaagaatagccagaagt
tccaggaataactaccccactccataaaatacttttcaatattggccttt
atttaagtttttttttccccccttcacaaacagagtgggccaatcagatc
tgtgtttcagcgttgcccaggggtctctagttagccatctctaatgtagg
cctcagtaccaagttcagtttcctgtgtgacgtgtaacaagagatataac
ttgtcctcagcatcactcggaggctgagatggggtagttcttacatcgtc
tccccttatggcaggcttgctgtgggtgctcaggaaacgctgtctgctag
ggttacaggttggtccaagtgtgtgtggatacaagaagcagcatttttgg
ctgaggtttcctgactggattgttttctaaggacaaggtgactttccctc
tgattaaacatttgcagtctgttctgagcagctgttgtccttcctcggaa
gttagagctccgagtattttcaccatgtaggcactgatctacacatgact
tgatcagagagaccaccactcccttttgttggctctcgactgctcattca
tctcttagagaagatcagtggagcaatgagctgtcctctgaccaggcttg
gcttgttgaggtcttgaattcagcctgacaatgttgagataggaatacgt
gtttcaaattcacatccacagatgccagcttgagtatttttaagttatat
tgtaagacctacagtgacgagcaggcactccttccctgtccgtggcgtgt
tgtatgttttagggtaaacgccatgatggggaatggaagattgcaggcct
ctgggtcctgattctgctaagtaaagccccggtgtagaggactgctcttt
gaatgaggtgatg
gaattctgaagcctgaagaagccaggagcaatcttcaggccctccccagg
ggaaataaatgccttcaaggactgtgccagggctgagaactgctagggtg
aaaagaggagtcaagacaagagagtgagggacagtgacagcccagctcat
tgagggaaccagttagtcagaggacctgcagaagggaacaagaaaagact
ggggtacagagaattgggatcaaggtagagattccacctctccctggagg
aaacaaaccagctggggtggtccagaatggctgtacaatcaggtagaaac
taactttgtcaaggacaaggacaaggtcatggctgtacaatactggtcta
atgctggtagggttggtagtcatctcctctatatctttaattctacaggc
ataagtgtgtcatctaaaaactgtattcatgatttaaaaaagaaaagaag
tcccttttcagtctcctggctccctttccctgcagaaggagccaggcaag
gtcctcccgccagcagcacagctgtccctctggggatggggagctacaca
gagctctgaagtgggtgatttatggagaagaccaggagtcacgtgcttct
ttgatgacagtcacacctgccaaaactcccaaagacccacctcaggctca
tgtcatcttttaagagcaaaagctgcttgcttgctttcctaacagtgtag
tttggacacaaaatatctcccgtgctgaacagacatctgggggctgtggg
aagggagcccaccatgaccctctgtgatgttgtattttcaagaattcctt
ccctgggggaggtgtaacactgtctatctctccttacaaagtgccaatag
caaagcaaggtatgattccaccgaatttcaatgggggagaccaagaggta
cctagggtcttaaacaaagataaggattccctctaattactgggtgtacc
tgaatgcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_27889950_27890857
seq2: B6Ng01-037O23.b_48_959

seq1  GAATTCCCACTGGGAGTGGCCAGATACAGTTTCTAAGAATAGCCAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTGGGAGTGGCCAGATACAGTTTCTAAGAATAGCCAGAAGT  50

seq1  TCCAGGAATAACTACCCCACTCCATAAAATACTTTTCAATATTGGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAATAACTACCCCACTCCATAAAATACTTTTCAATATTGGCCTTT  100

seq1  ATTTAAGTTTTTTTTTCCCCCCTTCACAAACAGAGTGGGCCAATCAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTTTTTTTTCCCCCCTTCACAAACAGAGTGGGCCAATCAGATC  150

seq1  TGTGTTTCAGCGTTGCCCAGGGGTCTCTAGTTAGCCATCTCTAATGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCAGCGTTGCCCAGGGGTCTCTAGTTAGCCATCTCTAATGTAGG  200

seq1  CCTCAGTACCAAGTTCAGTTTCCTGTGTGACGTGTAACAAGAGATATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTACCAAGTTCAGTTTCCTGTGTGACGTGTAACAAGAGATATAAC  250

seq1  TTGTCCTCAGCATCACTCGGAGGCTGAGATGGGGTAGTTCTTACATCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCAGCATCACTCGGAGGCTGAGATGGGGTAGTTCTTACATCGTC  300

seq1  TCCCCTTATGGCAGGCTTGCTGTGGGTGCTCAGGAAACGCTGTCTGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTATGGCAGGCTTGCTGTGGGTGCTCAGGAAACGCTGTCTGCTAG  350

seq1  GGTTACAGGTTGGTCCAAGTGTGTGTGGATACAAGAAGCAGCATTTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAGGTTGGTCCAAGTGTGTGTGGATACAAGAAGCAGCATTTTTGG  400

seq1  CTGAGGTTTCCTGACTGGATTGTTTTCTAAGGACAAGGTGACTTTCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTTCCTGACTGGATTGTTTTCTAAGGACAAGGTGACTTTCCCTC  450

seq1  TGATTAAACATTTGCAGTCTGTTCTGAGCAGCTGTTGTCCTTCCTCGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAACATTTGCAGTCTGTTCTGAGCAGCTGTTGTCCTTCCTCGGAA  500

seq1  GTTAGAGCTCCGAGTATTTTCACCATGTAGGCACTGATCTACACATGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGCTCCGAGTATTTTCACCATGTAGGCACTGATCTACACATGACT  550

seq1  TGATCAGAGAGACCACCACTCCCTTTTGTTGGCTCTCGACTGCTCATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGAGAGACCACCACTCCCTTTTGTTGGCTCTCGACTGCTCATTCA  600

seq1  TCTCTTAGAGAAGATCAGTGGAGCAATGAGCTGTCCTCTGACCAGGCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGAGAAGATCAGTGGAGCAATGAGCTGTCCTCTGACCAGGCTTG  650

seq1  GCTTGTTGAGGTCTTGAATTCAGCCTGACAATGTTGAGATAGGAATACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGAGGTCTTGAATTCAGCCTGACAATGTTGAGATAGGAATACGT  700

seq1  GTTTCAAATTCACATCCACAGATGCCAGCTTGAGTATTTTTAAGTTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAATTCACATCCACAGATGCCAGCTTGAGTATTTTTAAGTTATAT  750

seq1  TGTAAGACCTACAGTGACGAGCAGGCACTTCCTTCCTGTCCGTGGCGTG-  799
      ||||||||||||||||||||||||||||| | | ||||||||||||||| 
seq2  TGTAAGACCTACAGTGACGAGCAGGCACTCCTTCCCTGTCCGTGGCGTGT  800

seq1  TGTATGTTTTA-GGTAAACGCCATGAT-GGGAATGGAAGATTTGCAGGCC  847
      ||||||||||| ||||||||||||||| |||||||||||| |||||||||
seq2  TGTATGTTTTAGGGTAAACGCCATGATGGGGAATGGAAGA-TTGCAGGCC  849

seq1  TCTGGTCCTTGATTCTGCTAAGTAAAGCCCC-GTGTAGAGGACTGCTCTT  896
      |||||  | |||||||||||||||||||||| ||||||||||||||||||
seq2  TCTGGGTCCTGATTCTGCTAAGTAAAGCCCCGGTGTAGAGGACTGCTCTT  899

seq1  TGAGTGA-GTGAT  908
      ||| ||| |||||
seq2  TGAATGAGGTGAT  912

seq1: chr14_28041205_28042161
seq2: B6Ng01-037O23.g_69_1029 (reverse)

seq1  AGCTGCTTTCAGGT-CACCCATGTAATTAGAGGGAACTCCTTATCCTTGC  49
      |||||| ||||||| |||||| |||||||||||||| |||||||| ||| 
seq2  AGCTGCATTCAGGTACACCCA-GTAATTAGAGGGAA-TCCTTATCTTTG-  47

seq1  TTTAAGACCCTA-GTACCTCCTTGTCTCCCCAGTTGAACTCTGGTGGAAT  98
      |||||||||||| ||||||| | ||||||||  ||||| |  ||||||||
seq2  TTTAAGACCCTAGGTACCTCTTGGTCTCCCCCATTGAAATTCGGTGGAAT  97

seq1  CCTACTTTGCTTTGCTATTGGCACTTTGTAAGGAGAGATAGACAGTGTTA  148
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTTGCTTTGCTATTGGCACTTTGTAAGGAGAGATAGACAGTGTTA  147

seq1  CACCT-CCCCAGGGAAGGAATTCTTG-AAATACAACATCACAGAGGGTCA  196
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  CACCTCCCCCAGGGAAGGAATTCTTGAAAATACAACATCACAGAGGGTCA  197

seq1  TGGTGGGCTCCCTTCCCACAGCCCCCAGATGTCTGTTCAGCACGGGAGAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCTCCCTTCCCACAGCCCCCAGATGTCTGTTCAGCACGGGAGAT  247

seq1  CTTTTGTGTCCAAACTACACTGTTAGGAAAGC-AGCAAGCAGCTTTTGCT  295
       ||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTTTGTGTCCAAACTACACTGTTAGGAAAGCAAGCAAGCAGCTTTTGCT  297

seq1  CTT-AAAGATGACATGAGCCTGAGGTGGGTCTTTGGGAGTTTTGGCAGGT  344
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGATGACATGAGCCTGAGGTGGGTCTTTGGGAGTTTTGGCAGGT  347

seq1  GTGACTGTCATC-AAGAAGCACGTGACTCCTGGTCTTCTCCATAAATCAC  393
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTCATCAAAGAAGCACGTGACTCCTGGTCTTCTCCATAAATCAC  397

seq1  CCACTTCAGAGCTCTGTGTAGCTCCCCATCCCCAGAGGGACAGCTGTGCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCAGAGCTCTGTGTAGCTCCCCATCCCCAGAGGGACAGCTGTGCT  447

seq1  GCTGGCGGGAGGACCTTGCCTGGCTCCTTCTGCAGGGAAAGGGAGCCAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCGGGAGGACCTTGCCTGGCTCCTTCTGCAGGGAAAGGGAGCCAGG  497

seq1  AGACTGAAAAGGGACTTCTTTTCTTTTTTAAATCATGAATACAGTTTTTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAAAGGGACTTCTTTTCTTTTTTAAATCATGAATACAGTTTTTA  547

seq1  GATGACACACTTATGCCTGTAGAATTAAAGATATAGAGGAGATGACTACC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACACACTTATGCCTGTAGAATTAAAGATATAGAGGAGATGACTACC  597

seq1  AACCCTACCAGCATTAGACCAGTATTGTACAGCCATGACCTTGTCCTTGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTACCAGCATTAGACCAGTATTGTACAGCCATGACCTTGTCCTTGT  647

seq1  CCTTGACAAAGTTAGTTTCTACCTGATTGTACAGCCATTCTGGACCACCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAAAGTTAGTTTCTACCTGATTGTACAGCCATTCTGGACCACCC  697

seq1  CAGCTGGTTTGTTTCCTCCAGGGAGAGGTGGAATCTCTACCTTGATCCCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGTTTGTTTCCTCCAGGGAGAGGTGGAATCTCTACCTTGATCCCA  747

seq1  ATTCTCTGTACCCCAGTCTTTTCTTGTTCCCTTCTGCAGGTCCTCTGACT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGTACCCCAGTCTTTTCTTGTTCCCTTCTGCAGGTCCTCTGACT  797

seq1  AACTGGTTCCCTCAATGAGCTGGGCTGTCACTGTCCCTCACTCTCTTGTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTTCCCTCAATGAGCTGGGCTGTCACTGTCCCTCACTCTCTTGTC  847

seq1  TTGACTCCTCTTTTCACCCTAGCAGTTCTCAGCCCTGGCACAGTCCTTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCCTCTTTTCACCCTAGCAGTTCTCAGCCCTGGCACAGTCCTTGA  897

seq1  AGGCATTTATTTCCCCTGGGGAGGGCCTGAAGATTGCTCCTGGCTTCTTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTATTTCCCCTGGGGAGGGCCTGAAGATTGCTCCTGGCTTCTTC  947

seq1  AGGCTTCAGAATTC  957
      ||||||||||||||
seq2  AGGCTTCAGAATTC  961