BAC Information

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BAC

Clone NameB6Ng01-038N20
Chromosome14 (Build37)
Map Location 51,974,267 - 51,975,442
singlet/doubletsinglet
Overlap genenone
Upstream geneTlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203
Downstream geneLOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038N20.bB6Ng01-038N20.g
ACCDH866303DH866304
length1,1461,267
definitionDH866303|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N20, 5' end.DH866304|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggcccattcctaaacacagtaaaatcaatatacaacaaacca
gtagccaacatcaaactacagagagagaaactggaagcaatcacactaaa
atcaaggagtaaacaaggctgccctcccagtccctacctattcaatattg
tactcagagtcctagccagagcaattagacaacagaaggaggacaaaggg
atacaaattggaaagaaagaagttaaaataccactatttgcagatgatag
gatcatatacttaactgaccataaaagttccaccagagaattccttcctt
ttttctttcttctattttttgaaattttttcctttataattttaaactcc
agattttttcctctcctggtccacccccataccatatcccataccttcac
ccaacaccccctgtgtccacaggatatccccacccccaccagacctttga
actctctagggcctccattctcttgaggcttgtgtgcattttctctgact
gaatctacacctggcagtcctctgttgtatatattttgggggcctcataa
aagctgttgtatgcagcctggttggtattgcagtgtctgagagatctcta
gggtccaggtttactgagtcttcaggtcctccaacaaggttacccccccc
ccagcttcttccagctttccaaaaacaggggttagcagctttccataatt
caaccacaggggtcagcacacaaccaatggttagaagcactgaccaccag
agaactgctaaacctgatatacaacttcagcaaagtggctggatataaat
tatgtcaaacaaatcagtatccttcttttactcaaaaaataaacaggctg
agaaagaaattaggaaaaccgcacccttctcaatagtcacaaacaaaaga
aaataccttgaagagactctaaccaggcaagtggaaacatctgtatgaca
aaacttcaagtctctgaagaaagaaatcaagacatgtcagggtagaaaga
tcttcccttctcatggatggcaggatgaatagtaaaatggctttatgcat
ctacatattcaatgtactctcatcaaatcaaataatgttcttgtactaga
aagcatttgtaatcattagaataacaaatgcctaaagggcaacaaa
gaattcctttagctgaaaaacatcttcatcaaagatgctgggtataaaat
cgtctccaaaaaaccactggccgtccttttcccaaatataaaatgtttgt
agaagctagacaaaatgtttttacaatacaaattgcttattcaataatat
cagatttcttggtatttcgctaaacaaggaagtgaaaggtatatatgaag
aattgataagtctctgaagaaagatatttaggaaggtatcagaagttgga
aaactcccaatgttcctggtacattaacatagtaaaaaatggccatctta
ccgaaggtaatttacagattcaatgcaaatccaaacaaaattctaacatt
atcctttctagtccttgaaagagcaattctcaacttcatatgaaaaaaac
cactcaggatattaaaactgtcacgtaccaaaaaaataaagtagtaaata
aaaaaggaatttctggaagtataatgaacaagctatcgtacaggccagta
gtactaaatactacacgatattgccatgaaaatgaacagttgaaattttg
gagtcaaattgaaaactgagaaacaaaccatctaacctaaagacatttga
tttttgaagaagaaaccaaaactacaccgtgcaaaagagaaagcatcctc
aataaatgatgctggacaaactggatgtctacatgtagaggaaagcaaat
agatgagtctgcacaaaactcaggaaaacatgaatcaaagactgcaacat
aaaacctgtcacaaaaggaactggataactgctcaaacactttggcacag
gaaacacctttgtaaatagcacaccaataattcaggcattgagattaaca
gttactaaacatggccctcattgaattgaaaaccttctgtaaggcaaagt
taagcttcaaaccacaaaattgaaacaataaacgagaaaatttcatcacc
aatccttcacctgaaagtgttataatcaaaaatatataaagggatagaca
aattagatgacacaaagaaataacccaatttatagtagggtaagtagtcc
tcagtgctaagcagagctttgtcaaacaggagtcaatggccttgaaacac
ttgaggaaaagttcaaattctactcattaaggaatttcaatacaaatggt
ctgaattcaatatactggtttgtcccggtagaattgctgagtaagccaat
ccagcaagtgccatgatttgggagtggagggaaccaatatcatgtcctca
tggagaataacatccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51974267_51975442
seq2: B6Ng01-038N20.b_46_1191

seq1  GAATTCATGGCCCATTCCTAAACACAGTAAAATCAATATACAACAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCCCATTCCTAAACACAGTAAAATCAATATACAACAAACCA  50

seq1  GTAGCCAACATCAAACTACAGAGAGAGAAACTGGAAGCAATCACACTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAACATCAAACTACAGAGAGAGAAACTGGAAGCAATCACACTAAA  100

seq1  ATCAAGGAGTAAACAAGGCTGCCCTCCCAGTCCCTACCTATTCAATATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAGTAAACAAGGCTGCCCTCCCAGTCCCTACCTATTCAATATTG  150

seq1  TACTCAGAGTCCTAGCCAGAGCAATTAGACAACAGAAGGAGGACAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGAGTCCTAGCCAGAGCAATTAGACAACAGAAGGAGGACAAAGGG  200

seq1  ATACAAATTGGAAAGAAAGAAGTTAAAATACCACTATTTGCAGATGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATTGGAAAGAAAGAAGTTAAAATACCACTATTTGCAGATGATAG  250

seq1  GATCATATACTTAACTGACCATAAAAGTTCCACCAGAGAATTCCTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATATACTTAACTGACCATAAAAGTTCCACCAGAGAATTCCTTCCTT  300

seq1  TTTTCTTTCTTCTATTTTTTGAAATTTTTTCCTTTATAATTTTAAACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTTCTATTTTTTGAAATTTTTTCCTTTATAATTTTAAACTCC  350

seq1  AGATTTTTTCCTCTCCTGGTCCACCCCCATACCATATCCCATACCTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTCCTCTCCTGGTCCACCCCCATACCATATCCCATACCTTCAC  400

seq1  CCAACACCCCCTGTGTCCACAGGATATCCCCACCCCCACCAGACCTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACCCCCTGTGTCCACAGGATATCCCCACCCCCACCAGACCTTTGA  450

seq1  ACTCTCTAGGGCCTCCATTCTCTTGAGGCTTGTGTGCATTTTCTCTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTAGGGCCTCCATTCTCTTGAGGCTTGTGTGCATTTTCTCTGACT  500

seq1  GAATCTACACCTGGCAGTCCTCTGTTGTATATATTTTGGGGGCCTCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTACACCTGGCAGTCCTCTGTTGTATATATTTTGGGGGCCTCATAA  550

seq1  AAGCTGTTGTATGCAGCCTGGTTGGTATTGCAGTGTCTGAGAGATCTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTGTATGCAGCCTGGTTGGTATTGCAGTGTCTGAGAGATCTCTA  600

seq1  GGGTCCAGGTTTACTGAGTCTTCAGGTCCTCCAACAAGGTTACCCCCCCC  650
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGTCCAGGTTTACTGAGTCTTCAGGTCCTCCAACAAGGTTA-CCCCCCC  649

seq1  CCCAGCTTCTTCCAGCTTTCCAAAAACAGGGGTTAGCAGCTTTCCATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTTCTTCCAGCTTTCCAAAAACAGGGGTTAGCAGCTTTCCATAAT  699

seq1  TCAACCACAGGGGTCAGCACACAACCAATGGTTAGAAGCACTGACCACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACAGGGGTCAGCACACAACCAATGGTTAGAAGCACTGACCACCA  749

seq1  GAGAACTGCTAAACCTGATATACAACTTCAGCAAAGTGGCTGGATATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGCTAAACCTGATATACAACTTCAGCAAAGTGGCTGGATATAAA  799

seq1  TTATGTCAAACAAATCAGTATCCTTCTTTTACTCAAAAAATAAACAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCAAACAAATCAGTATCCTTCTTTTACTCAAAAAATAAACAGGCT  849

seq1  GAGAAAGAAATTAGGAAAACCGCACCCTTCTCAATAGTCACAAACAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAATTAGGAAAACCGCACCCTTCTCAATAGTCACAAACAAAAG  899

seq1  AAAATACCTTGAAGGAGACTCTAACCAGGCAAGT-GAAACATCTGTATGA  949
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  AAAATACCTTGAA-GAGACTCTAACCAGGCAAGTGGAAACATCTGTATGA  948

seq1  CAAAACTTCAAGTCTCTGAAGAAAGAAATCAAAGAACATGTCAGAAGGTA  999
      ||||||||||||||||||||||||||||||||   |||||||||  ||||
seq2  CAAAACTTCAAGTCTCTGAAGAAAGAAATCAA--GACATGTCAG--GGTA  994

seq1  GAAAGATCTCCCCTTCTCATGGATTGGCAGGATTGATATAGTAAAAATGG  1049
      ||||||||| ||||||||||||| |||||||| ||| ||||| |||||||
seq2  GAAAGATCTTCCCTTCTCATGGA-TGGCAGGA-TGA-ATAGT-AAAATGG  1040

seq1  CCTTTATGCATCTACATATTCAATGTACTCCTCATCAAAATTCAAAATAA  1099
       |||||||||||||||||||||||||||| |||||||||  || ||||||
seq2  -CTTTATGCATCTACATATTCAATGTACT-CTCATCAAA--TC-AAATAA  1085

seq1  ATTGTTCTTGTACTTAGAAAAGCAATTTGTAAATTCATTTAGAATAACAA  1149
        ||||||||||| ||| ||||| ||||||||  ||| ||||||||||  
seq2  --TGTTCTTGTAC-TAG-AAAGC-ATTTGTAA--TCA-TTAGAATAAC--  1125

seq1  AAAAAATGCCTTAGAAGGGCAAACAAA  1176
         ||||||||   |||||| ||||||
seq2  ---AAATGCCT--AAAGGGC-AACAAA  1146