BAC Information

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BAC

Clone NameB6Ng01-038P21
Chromosome14 (Build37)
Map Location 86,153,962 - 86,297,182
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038P21.bB6Ng01-038P21.g
ACCDH866390DH866391
length1,1031,166
definitionDH866390|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P21, 5' end.DH866391|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,296,078 - 86,297,182)(86,153,962 - 86,155,139)
sequence
gaattctcaaattatgagtttgttttctgagagctttactagtgacatca
gcaagaagtgctaaacactgtctaacatgtctgtcctgtcatctgagaga
gcatacagctctgtgctttcactttttagtggaaaaatgtggctccaggg
ttggaatatttgaagttcctttataataaggagattaaaggagtgttgtg
aaggcattaactaaggatgaaatatgcataaattattttgtttattacat
tatccacaactatgcctattgtaacctatgtggctttgaggttatagtaa
ttttgcatgtatagtaaactttcagaaattatattcttgagtacataggg
gaaatttgcccttaaactgatttcgagtatcttgttgaagttagtgatat
gtctaccaaaaataataaaaagcatgcccttataaccctaaagctaatcc
taacccaagacttaaacttgaatttctgtacatctttactaacctaaaaa
aaaaggaagtttattttacttaaatatggtgttaaatattatttgtagta
ttacctactgatcatattatattgaaactttatgttttactgtcattctg
gatacactcttacttaattcttatttctttaaatcagaaatctctgttta
ttcatctatttgaccatgcattgcatttaacagcaattctttttccaaag
gctctcacaagcagcagagtcaagcatccttttgttttgcttttgtttgg
atggatcactgacaaatagccctgctgtgattacacatttattttaaagt
gaaaaatctatacaggaatcattcttaatatgtctctgaagttggttttc
atcattagtcaagactatagtggtaaatgaggatcatttagagaagacat
ggaaggcttaaacatagttgtaacagaattggcaagagagatgaaagatg
gacttggttttttaagagtatgtgtaggcagatataagtccactgtagta
cctttaccattgtttcagcctttcaggagtgcacttaagcttgactggat
tgctagctatgacaagcacagcagaaacatcttaaaggaaggagtcatat
att
gaattctttcttcagctctgagccccattttttaatggggttattcaatt
ttctggagcccaccttcttgaattctgttccattgatctacctgcctgtc
tctgtacccatactatgcagtttttattactatttctgtttctaatctac
tttgtggttttatgctttccttttgattgtattcaggccttgaaaatatc
ctattggctattttctccataattacttgcctttttctttcatgtctcca
tggtttgtggtcatccacagaaaatgaaatcatctgccgtttttaagttg
aaaaattaatttaaaatatatcttagtagtttttagaggacataaagtaa
gatggcatactaataaaagaataatgtttgtattatataatataaatata
tatttcacattatggttttcaatatgaaaactaaaggagataaaaaaaat
atggtgtgtgacaaactgaaactgagtcagaatgtaatgtgatgtaaaat
gagatcatgacttcataaacataggaaatacaatgctgtggttttgtttg
cagaaccagaaaaccatccactttaacactgcaaaacatcagcacttctc
ttcatatgtaatagttgctaaaataaatcaatgatacatcatattatata
taaatgtgtgttaccattcattcaaattaattggaaccttttatttccac
tgtgtgttagacctgtctctctgagtgactgttaacagtgactagactgt
aaggagtgagactacttttaattctcatttcctatgacatgagccataaa
cttctatcaagaatttagaccctgttctacagaaagaaaatgaaagaaac
attttatgtgtattataaaggcagacactatatattctataaagaattat
tttcctcctttcactatcactatttctaatatttctggcacctttgaaac
acccaaataactgttgctcagcaaatctaattacacactcaatctgttag
aagcgcccctatcacatgcacccagatgcttgtcaacacagttcagcaaa
cattctaaaccctgttgcaaatttacatttatccaagaagagtcattaaa
ccagccagaagtactctcaggctagtgaatgcatctgcctccctccttcc
gaagatgctaataagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86296078_86297182
seq2: B6Ng01-038P21.b_47_1149 (reverse)

seq1  AATATATGACTCC-TCCTCTAAGATGTTTCTGCCTGGTGCTTTGTCATAG  49
      ||||||||||||| |||| ||||||||||||||   |||| |||||||||
seq2  AATATATGACTCCTTCCTTTAAGATGTTTCTGC--TGTGC-TTGTCATAG  47

seq1  CTAGCAATACAGTCAAGCTTAAGTGCACTCCTGAAAGGCTGAAACAATGG  99
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAATCCAGTCAAGCTTAAGTGCACTCCTGAAAGGCTGAAACAATGG  97

seq1  TAAAGGTACTACAGTGGACTTATATCTGCCTACACATACTCTTAGAAAAC  149
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAAGGTACTACAGTGGACTTATATCTGCCTACACATACTCTTAAAAAAC  147

seq1  CAAGTCCATCTTTCATCTCTCTTGCCAATTCTGTTACAACTATGTTTAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCATCTTTCATCTCTCTTGCCAATTCTGTTACAACTATGTTTAAG  197

seq1  CCTTCCATGTCTTCTCTAAATGATCCTCATTTACCACTATAGTCTTGACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCATGTCTTCTCTAAATGATCCTCATTTACCACTATAGTCTTGACT  247

seq1  AATGATGAAAACCAACTTCAGAGACATATTAAGAATGATTCCTGTATAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGAAAACCAACTTCAGAGACATATTAAGAATGATTCCTGTATAGA  297

seq1  TTTTTCACTTTAAAATAAATGTGTAATCACAGCAGGGCTATTTGTCAGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACTTTAAAATAAATGTGTAATCACAGCAGGGCTATTTGTCAGTG  347

seq1  ATCCATCCAAACAAAAGCAAAACAAAAGGATGCTTGACTCTGCTGCTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCAAACAAAAGCAAAACAAAAGGATGCTTGACTCTGCTGCTTGT  397

seq1  GAGAGCCTTTGGAAAAAGAATTGCTGTTAAATGCAATGCATGGTCAAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCTTTGGAAAAAGAATTGCTGTTAAATGCAATGCATGGTCAAATA  447

seq1  GATGAATAAACAGAGATTTCTGATTTAAAGAAATAAGAATTAAGTAAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAAACAGAGATTTCTGATTTAAAGAAATAAGAATTAAGTAAGAG  497

seq1  TGTATCCAGAATGACAGTAAAACATAAAGGTTCAATATAATATGATCAGT  549
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGTATCCAGAATGACAGTAAAACATAAAGTTTCAATATAATATGATCAGT  547

seq1  AGGTAATACTACAAATAATATTTAACACCATATTTAAGTAAAATAAACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATACTACAAATAATATTTAACACCATATTTAAGTAAAATAAACTT  597

seq1  CCTTTTTTTTTAGGTTAGTAAAGATGTACAGAAATTCAAGTTTAAGTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTTTTAGGTTAGTAAAGATGTACAGAAATTCAAGTTTAAGTCTT  647

seq1  GGGTTAGGATTAGCTTTAGGGTTATAAGGGCATGCTTTTTATTATTTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGATTAGCTTTAGGGTTATAAGGGCATGCTTTTTATTATTTTTG  697

seq1  GTAGACATATCACTAACTTCAACAAGATACTCGAAATCAGTTTAAGGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACATATCACTAACTTCAACAAGATACTCGAAATCAGTTTAAGGGCA  747

seq1  AATTTCCCCTATGTACTCAAGAATATAATTTCTGAAAGTTTACTATACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCCTATGTACTCAAGAATATAATTTCTGAAAGTTTACTATACAT  797

seq1  GCAAAATTACTATAACCTCAAAGCCACATAGGTTACAATAGGCATAGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATTACTATAACCTCAAAGCCACATAGGTTACAATAGGCATAGTTG  847

seq1  TGGATAATGTAATAAACAAAATAATTTATGCATATTTCATCCTTAGTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAATGTAATAAACAAAATAATTTATGCATATTTCATCCTTAGTTAA  897

seq1  TGCCTTCACAACACTCCTTTAATCTCCTTATTATAAAGGAACTTCAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCACAACACTCCTTTAATCTCCTTATTATAAAGGAACTTCAAATA  947

seq1  TTCCAACCCTGGAGCCACATTTTTCCACTAAAAAGTGAAAGCACAGAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACCCTGGAGCCACATTTTTCCACTAAAAAGTGAAAGCACAGAGCT  997

seq1  GTATGCTCTCTCAGATGACAGGACAGACATGTTAGACAGTGTTTAGCACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTCTCTCAGATGACAGGACAGACATGTTAGACAGTGTTTAGCACT  1047

seq1  TCTTGCTGATGTCACTAGTAAAGCTCTCAGAAAACAAACTCATAATTTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGATGTCACTAGTAAAGCTCTCAGAAAACAAACTCATAATTTGA  1097

seq1  GAATTC  1105
      ||||||
seq2  GAATTC  1103

seq1: chr14_86153962_86155139
seq2: B6Ng01-038P21.g_68_1233

seq1  GAATTCTTTCTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTCAATT  50

seq1  TTCTGGAGCCCACCTTCTTGAATTCTGTTCCATTGATCTACCTGCCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGCCCACCTTCTTGAATTCTGTTCCATTGATCTACCTGCCTGTC  100

seq1  TCTGTACCCATACTATGCAGTTTTTATTACTATTTCTGTTTCTAATCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACCCATACTATGCAGTTTTTATTACTATTTCTGTTTCTAATCTAC  150

seq1  TTTGTGGTTTTATGCTTTCCTTTTGATTGTATTCAGGCCTTGAAAATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTTTTATGCTTTCCTTTTGATTGTATTCAGGCCTTGAAAATATC  200

seq1  CTATTGGCTATTTTCTCCATAATTACTTGCCTTTTTCTTTCATGTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGCTATTTTCTCCATAATTACTTGCCTTTTTCTTTCATGTCTCCA  250

seq1  TGGTTTGTGGTCATCCACAGAAAATGAAATCATCTGCCGTTTTTAAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTGGTCATCCACAGAAAATGAAATCATCTGCCGTTTTTAAGTTG  300

seq1  AAAAATTAATTTAAAATATATCTTAGTAGTTTTTAGAGGACATAAAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAATTTAAAATATATCTTAGTAGTTTTTAGAGGACATAAAGTAA  350

seq1  GATGGCATACTAATAAAAGAATAATGTTTGTATTATATAATATAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCATACTAATAAAAGAATAATGTTTGTATTATATAATATAAATATA  400

seq1  TATTTCACATTATGGTTTTCAATATGAAAACTAAAGGAGATAAAAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACATTATGGTTTTCAATATGAAAACTAAAGGAGATAAAAAAAAT  450

seq1  ATGGTGTGTGACAAACTGAAACTGAGTCAGAATGTAATGTGATGTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGTGACAAACTGAAACTGAGTCAGAATGTAATGTGATGTAAAAT  500

seq1  GAGATCATGACTTCATAAACATAGGAAATACAATGCTGTGGTTTTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCATGACTTCATAAACATAGGAAATACAATGCTGTGGTTTTGTTTG  550

seq1  CAGAACCAGAAAACCATCCACTTTAACACTGCAAAACATCAGCACTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAGAAAACCATCCACTTTAACACTGCAAAACATCAGCACTTCTC  600

seq1  TTCATATGTAATAGTTGCTAAAATAAATCAATGATACATCATATTATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGTAATAGTTGCTAAAATAAATCAATGATACATCATATTATATA  650

seq1  TAAATGTGTGTTACCATTCATTCAAATTAATTGGAACCTTTTATTTCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGTGTTACCATTCATTCAAATTAATTGGAACCTTTTATTTCCAC  700

seq1  TGTGTGTTAGACCTGTCTCTCTGAGTGACTGTTAACAGTGACTAGACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTAGACCTGTCTCTCTGAGTGACTGTTAACAGTGACTAGACTGT  750

seq1  AAGGAGTGAGACTACTTTTAATTCTCATTTCCTATGACATGAGCCATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTGAGACTACTTTTAATTCTCATTTCCTATGACATGAGCCATAAA  800

seq1  CTTCTATCAAGAATTTAGACCCTGTTCTACAGAAAGAAAATGAAAGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATCAAGAATTTAGACCCTGTTCTACAGAAAGAAAATGAAAGAAAC  850

seq1  ATTTTATGTGTATTATAAAGGCAGACACTATATATTCTATAAAGAATTA-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTTATGTGTATTATAAAGGCAGACACTATATATTCTATAAAGAATTAT  900

seq1  TTTCCTCCTTTCAACTATCACTATTTCTAATATTTTCTGGCACCTTTGAA  949
      |||||||||||| ||||||||||||||||||| ||||||||||||||| |
seq2  TTTCCTCCTTTC-ACTATCACTATTTCTAATA-TTTCTGGCACCTTTG-A  947

seq1  AACACCCAAATAACTGTTGCTCAGCAAATCCTATTACACACTCAATCTGT  999
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  AACACCCAAATAACTGTTGCTCAGCAAATCTAATTACACACTCAATCTGT  997

seq1  TAGGAAGCGCCCCTATCACATGCACCCAAGATGC-TGTCAACACAAGTTC  1048
      || |||||||||||||||||||||||| |||||| ||||||||| |||| 
seq2  TA-GAAGCGCCCCTATCACATGCACCC-AGATGCTTGTCAACAC-AGTT-  1043

seq1  CAGCAAACATTCTAAAACCCTG-TGCAAATTTACATTTATCCAAG-AGAG  1096
      ||||||||||||| |||||||| |||||||||||||||||||||| ||||
seq2  CAGCAAACATTCT-AAACCCTGTTGCAAATTTACATTTATCCAAGAAGAG  1092

seq1  TCATTAACACAGCCAGAAGGTACTC-CAGGCTAGTGAAATGGCCAATTCT  1145
      |||||||  ||||||||| |||||| |||||||||| ||||  ||  |||
seq2  TCATTAAACCAGCCAGAA-GTACTCTCAGGCTAGTG-AATG--CA--TCT  1136

seq1  GCCTCTCTCCTTTCCAGATGATGCTAAATAAGT  1178
      ||||| ||||||  | || |||||| |||||||
seq2  GCCTCCCTCCTT--CCGAAGATGCT-AATAAGT  1166