BAC Information

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BAC

Clone NameB6Ng01-039O09
Chromosome14 (Build37)
Map Location 22,675,002 - 22,676,167
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620119, Vcl, Ap3m1, Adk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1
Downstream geneZfp503, 1700112E06Rik, EG665075, EG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039O09.b
ACCDH867032
length1,138
definitionDH867032|Mus musculus domesticus DNA, BAC clone: B6Ng01-039O09, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcccatgtttttaaagcgtttattgtcatggccgagagttgtg
atgagtgaaatcataccccactttctcagggcaggcctgaggttaaatac
cttttgcagggaggagtgtctgggaaggagagtttaattggctaagccct
tcagccctttaggtacctcattaaaatggagatctgtcttgagactctgt
gatctgtagtcacatcctctacctgtggaggcgcttggggcattgcccta
catgactgatggtcacagaattatggagagctgagggctcctgtgtgtca
ggagcctagtgcctaggggcgtggcaaactcctgtaccttgcaggaacac
ctgctaggtctcccagggtttaaacctagctccaccagaaaacaggctgc
ctttcacggttccaaaatcatgaggtactgccctggacctgggcacagat
aatgcctgagctggtcagccctggcctacctctgcctctgctcaacggtg
acagaggggcaagctaggcctctgtgcctgacaaagccattacttccatc
ccgagtcaaaggcccacatgccctctccttatccagagtccctagtctct
cagagaaggctccccacacaagtacagcaataatctccaggggcttgggg
ctagagtgtgtaacaaggctactgccccctacaaacctcagctgtggctc
cctcagatctgtgcctttgtggaatcttctcctggcccctcgtctgtcac
actgctgacaggcagggagcaatgaggcgtctctggagttcccaggaaga
ggcctgagagggagtgatgcagggctgggcagggtcagagagagcttcct
gcccctcgggtcatttcttttgagtcagaagagactctgagagcctcctc
tcaccagcatacagatgggaaactgaggcccattgctgacaagacttcct
gacacatagcaaagccagggccaagggaaagtagtttctttttgcatgca
gctctccaggcagagcaaaaagaagttacctgaacacagaagggcggggg
tctcccagctgaaactccagaccattctactccaggctagagactgccct
cagcatcacccttcagtcatgtctgcaggtggagaggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22675002_22676167
seq2: B6Ng01-039O09.b_46_1183 (reverse)

seq1  CCCTCTCAACCCTGGCAGACATGACTGGAGAGGGGTTGGAATGGCTGAGG  50
      ||||||| |||   ||||||||||||| || | | |       ||||| |
seq2  CCCTCTCCACC--TGCAGACATGACTGAAGGGTGAT-------GCTGA-G  40

seq1  GGCAGGTCTCTAGCCTGGAGTAGAATTGAGTCCTGTGAAGCTCTTCAGCT  100
      |||| ||||||||||||||||||||| |     | || ||   |||||||
seq2  GGCA-GTCTCTAGCCTGGAGTAGAATGG-----TCTGGAG--TTTCAGCT  82

seq1  GTGAGACCCCCCGCCCTCCTGTGTTCAGGCTCACCCCTCCCTCTCTGCCT  150
      | |||| |||||||||| ||||||||||| | ||      || | |||  
seq2  GGGAGA-CCCCCGCCCTTCTGTGTTCAGG-TAAC----TTCTTTTTGC--  124

seq1  CCTGCCTGGAGAGCTGCATTGCACAAAGACACTTACTTTCCCTTGGCCCT  200
       ||||||||||||||||| |||| ||||| || |||||||||||||||||
seq2  TCTGCCTGGAGAGCTGCA-TGCAAAAAGAAAC-TACTTTCCCTTGGCCCT  172

seq1  GGCTCTGCTATGTGTCAGGAAGTCTTGTCAGCAATGGGCCTCAGTTTCCC  250
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCTATGTGTCAGGAAGTCTTGTCAGCAATGGGCCTCAGTTTCCC  222

seq1  ATCTGTATGCTGGTGAGAGGAGGCTCTCAGAGTCTCTTCTGACTCAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATGCTGGTGAGAGGAGGCTCTCAGAGTCTCTTCTGACTCAAAAG  272

seq1  AAATGACCCGAGGGGCAGGAAGCTCTCTCTGACCCTGCCCAGCCCTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACCCGAGGGGCAGGAAGCTCTCTCTGACCCTGCCCAGCCCTGCAT  322

seq1  CACTCCCTCTCAGGCCTCTTCCTGGGAACTCCAGAGACGCCTCATTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTCTCAGGCCTCTTCCTGGGAACTCCAGAGACGCCTCATTGCTC  372

seq1  CCTGCCTGTCAGCAGTGTGACAGACGAGGGGCCAGGAGAAGATTCCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGTCAGCAGTGTGACAGACGAGGGGCCAGGAGAAGATTCCACAA  422

seq1  AGGCACAGATCTGAGGGAGCCACAGCTGAGGTTTGTAGGGGGCAGTAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGATCTGAGGGAGCCACAGCTGAGGTTTGTAGGGGGCAGTAGCC  472

seq1  TTGTTACACACTCTAGCCCCAAGCCCCTGGAGATTATTGCTGTACTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACACACTCTAGCCCCAAGCCCCTGGAGATTATTGCTGTACTTGTG  522

seq1  TGGGGAGCCTTCTCTGAGAGACTAGGGACTCTGGATAAGGAGAGGGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGCCTTCTCTGAGAGACTAGGGACTCTGGATAAGGAGAGGGCATG  572

seq1  TGGGCCTTTGACTCGGGATGGAAGTAATGGCTTTGTCAGGCACAGAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTTTGACTCGGGATGGAAGTAATGGCTTTGTCAGGCACAGAGGCC  622

seq1  TAGCTTGCCCCTCTGTCACCGTTGAGCAGAGGCAGAGGTAGGCCAGGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGCCCCTCTGTCACCGTTGAGCAGAGGCAGAGGTAGGCCAGGGCT  672

seq1  GACCAGCTCAGGCATTATCTGTGCCCAGGTCCAGGGCAGTACCTCATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCTCAGGCATTATCTGTGCCCAGGTCCAGGGCAGTACCTCATGAT  722

seq1  TTTGGAACCGTGAAAGGCAGCCTGTTTTCTGGTGGAGCTAGGTTTAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACCGTGAAAGGCAGCCTGTTTTCTGGTGGAGCTAGGTTTAAACC  772

seq1  CTGGGAGACCTAGCAGGTGTTCCTGCAAGGTACAGGAGTTTGCCACGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGACCTAGCAGGTGTTCCTGCAAGGTACAGGAGTTTGCCACGCCC  822

seq1  CTAGGCACTAGGCTCCTGACACACAGGAGCCCTCAGCTCTCCATAATTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCACTAGGCTCCTGACACACAGGAGCCCTCAGCTCTCCATAATTCT  872

seq1  GTGACCATCAGTCATGTAGGGCAATGCCCCAAGCGCCTCCACAGGTAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCATCAGTCATGTAGGGCAATGCCCCAAGCGCCTCCACAGGTAGAG  922

seq1  GATGTGACTACAGATCACAGAGTCTCAAGACAGATCTCCATTTTAATGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGACTACAGATCACAGAGTCTCAAGACAGATCTCCATTTTAATGAG  972

seq1  GTACCTAAAGGGCTGAAGGGCTTAGCCAATTAAACTCTCCTTCCCAGACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTAAAGGGCTGAAGGGCTTAGCCAATTAAACTCTCCTTCCCAGACA  1022

seq1  CTCCTCCCTGCAAAAGGTATTTAACCTCAGGCCTGCCCTGAGAAAGTGGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCTGCAAAAGGTATTTAACCTCAGGCCTGCCCTGAGAAAGTGGG  1072

seq1  GTATGATTTCACTCATCACAACTCTCGGCCATGACAATAAACGCTTTAAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATTTCACTCATCACAACTCTCGGCCATGACAATAAACGCTTTAAA  1122

seq1  AACATGGGCTGAATTC  1166
      ||||||||||||||||
seq2  AACATGGGCTGAATTC  1138