BAC Information

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BAC

Clone NameB6Ng01-039P08
Chromosome14 (Build37)
Map Location 28,426,774 - 28,547,712
singlet/doubletdoublet
Overlap geneErc2
Upstream geneA630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039P08.bB6Ng01-039P08.g
ACCDH867075DH867076
length1,1271,110
definitionDH867075|Mus musculus domesticus DNA, BAC clone: B6Ng01-039P08, 5' end.DH867076|Mus musculus domesticus DNA, BAC clone: B6Ng01-039P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,546,585 - 28,547,712)(28,426,774 - 28,427,911)
sequence
gaattcaacaacagcaacaaagaaaggatggcttctttcaataatccttt
cttttgaaatttacatttctttgtcccctgagaacacaacgcatgatctc
aagctcctacccagagaggcctgtgttcctaggacttattagaaaaaaca
gacagagagacacagacgggtattttaaataccacattaaactaaatatc
cttttgcatttgctaaataaacaggatttcattgctcacatctcctggat
aaagtagaaaagaaaacgaaagaaagaaaagaaaacaaatgtaagaaaag
ggctcaaggtatctgaggctgtctacagaccaggttaaactggctgcatg
gggctttcggctctggagtatactgggcctccatagccctggcaagccca
agagagtctgatagcaacacgccctcaggtgctctgtggagcgtgaagct
ctcagtcacagtaaccaagtaccctaaaactgtgtctccaatgaatactg
cagcatctctcagaaaagtcaggggaagttctgcaccccaacccagcact
taaacctcaaggagtgacaaacgaagcatgccatcctttaataaaaggtg
ggctctgacaccaacgttcctgagtatgtttgtagatagggttactatgg
aaatagatttcgcttatgcccctctcctgagcttctgctgtcttttggct
cataagccacaccctcataccactaattcccagcaaataaaaactgagaa
ttgggttatccccacagatttcaccgtgacagcaggtcactctttccacc
atgatgggtgcctgctgcatcccatttcactgtttagtattcgtccatca
ggtgttcttgttggctgagctgatgaaggcagaaagaccaagatgctaat
ctgtgtgctcatcctctctaaggccacttgcagcaccatgctacacccac
agaacacactttttattctttgaaacaacaatgtctgaatatagactggc
atgcattcatcattttcaacagccttatggacatcttatcttccagatgg
gagcctctggaaagaagcccttaagaaggagaaggtaccagctttattag
gctagcctggatagacaagcaattgtt
gaattctcttttgcaaagtatttgccttaaggatttaggatatatttttt
tgtccctatttatattctgcagtccataatttgagagccgtggatgtact
gaaggtatgacgacctttcctccccaaccctgaaacacctgctagaaccc
acccccacccagaggcacacagtgtctgtccaagccttgggaagggcata
tgccactctaaacaacatctgacacgcctcatgctccaataaacttcact
ctggaacaaggtcacagaaggaatgcattttgatccttactcgcggtata
attttgctcttaaagagaaatgcagcatttaaaaaggcatgtctcctctt
cttatttttaggactgttttgcttccaaatgttttctggccagcgcccag
ctttttatgtgtgttcctgaaactttagaaagaacaacagcttctgaaag
tcacattggccgttgaggaaatctcaaagctgtcacagaatatagccctg
acaactgaatgtactatgcattgagatgatgctaatcttcatgtattgag
cattttctataggtctgccacagccaaagaaactttcccagcaatttctt
atctactcgcttcaagttatgtatgaagcaagtactactaattattctat
gtgtttttttttttttttttgagacaggatcatgcttagtacggcaagct
gtcctcaaatttgtcatcctcttaatcttgtgggtgctgtgattacaaac
agatgtgggtcatcacacccaactatctgtcttcaccccctccttatgat
tatcaggagtcttacagggactaaattatccaagattatataacttgtaa
atgaatggactcgatggaaaactcaaatctgaccgttgatatactttgct
cttgtgcagatatatagagcgggagattgagtactggctcttcagacaat
ttaagttcactaccaattgtacctatggctcaggctcacatctagcacaa
atttatctccactcattacaccaaaatgtctcaactggttaaagaccctt
tgatgatggatggtcagtacaactccaatgtgctggcaactgatggtggg
catagtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28546585_28547712
seq2: B6Ng01-039P08.b_42_1168 (reverse)

seq1  AACAAATGCTTGTCTATCCA-GCTAGCCT-ATACAGCTGGTACCTCTCTT  48
      ||||| |||||||||||||| |||||||| ||| ||||||||||| ||| 
seq2  AACAATTGCTTGTCTATCCAGGCTAGCCTAATAAAGCTGGTACCT-TCTC  49

seq1  CTT-TTAGTGCTTTCTTTCCAGAGGCTCCCATCTGGGAGAT-AGATGTCC  96
      ||| |||  |  |||||||||||||||||||||||| |||| ||||||||
seq2  CTTCTTAAGGGCTTCTTTCCAGAGGCTCCCATCTGGAAGATAAGATGTCC  99

seq1  AATAAAGGCTGTTGAAAATGATTGAATGCATGCCAGTCTATATTCAGACA  146
      |   ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  A--TAAGGCTGTTGAAAATGA-TGAATGCATGCCAGTCTATATTCAGACA  146

seq1  TTGTTGTTTTCAAAGAATAAAAAGTGTGTTCTGTGGGTGTAGCATGGTGC  196
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTG-TTTCAAAGAATAAAAAGTGTGTTCTGTGGGTGTAGCATGGTGC  195

seq1  TGCAAGTGGCCTTAGAGAGGATGAGCACACAGATTAGCATCTTGGTCCTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCAAGTGGCCTTAGAGAGGATGAGCACACAGATTAGCATCTTGGTCTTT  245

seq1  CTGCCTTCATCAGCTCAGCCAACAAGAACACCTGATGGACGAATACTAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCATCAGCTCAGCCAACAAGAACACCTGATGGACGAATACTAAA  295

seq1  CAGTGAAATGGGATGCAGCAGGCACCCATCATGGTGGAAAGAGTGACCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAATGGGATGCAGCAGGCACCCATCATGGTGGAAAGAGTGACCTG  345

seq1  CTGTCACGGTGAAATCTGTGGGGATAACCCAATTCTCAGTTTTTATTTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACGGTGAAATCTGTGGGGATAACCCAATTCTCAGTTTTTATTTGC  395

seq1  TGGGAATTAGTGGTATGAGGGTGTGGCTTATGAGCCAAAAGACAGCAGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTAGTGGTATGAGGGTGTGGCTTATGAGCCAAAAGACAGCAGAA  445

seq1  GCTCAGGAGAGGGGCATAAGCGAAATCTATTTCCATAGTAACCCTATCTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGAGAGGGGCATAAGCGAAATCTATTTCCATAGTAACCCTATCTA  495

seq1  CAAACATACTCAGGAACGTTGGTGTCAGAGCCCACCTTTTATTAAAGGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATACTCAGGAACGTTGGTGTCAGAGCCCACCTTTTATTAAAGGAT  545

seq1  GGCATGCTTCGTTTGTCACTCCTTGAGGTTTAAGTGCTGGGTTGGGGTGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTTCGTTTGTCACTCCTTGAGGTTTAAGTGCTGGGTTGGGGTGC  595

seq1  AGAACTTCCCCTGACTTTTCTGAGAGATGCTGCAGTATTCATTGGAGACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCCCCTGACTTTTCTGAGAGATGCTGCAGTATTCATTGGAGACA  645

seq1  CAGTTTTAGGGTACTTGGTTACTGTGACTGAGAGCTTCACGCTCCACAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTAGGGTACTTGGTTACTGTGACTGAGAGCTTCACGCTCCACAGA  695

seq1  GCACCTGAGGGCGTGTTGCTATCAGACTCTCTTGGGCTTGCCAGGGCTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGAGGGCGTGTTGCTATCAGACTCTCTTGGGCTTGCCAGGGCTAT  745

seq1  GGAGGCCCAGTATACTCCAGAGCCGAAAGCCCCATGCAGCCAGTTTAACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCCAGTATACTCCAGAGCCGAAAGCCCCATGCAGCCAGTTTAACC  795

seq1  TGGTCTGTAGACAGCCTCAGATACCTTGAGCCCTTTTCTTACATTTGTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGTAGACAGCCTCAGATACCTTGAGCCCTTTTCTTACATTTGTTT  845

seq1  TCTTTTCTTTCTTTCGTTTTCTTTTCTACTTTATCCAGGAGATGTGAGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTCTTTCGTTTTCTTTTCTACTTTATCCAGGAGATGTGAGCA  895

seq1  ATGAAATCCTGTTTATTTAGCAAATGCAAAAGGATATTTAGTTTAATGTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCCTGTTTATTTAGCAAATGCAAAAGGATATTTAGTTTAATGTG  945

seq1  GTATTTAAAATACCCGTCTGTGTCTCTCTGTCTGTTTTTTCTAATAAGTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAAATACCCGTCTGTGTCTCTCTGTCTGTTTTTTCTAATAAGTC  995

seq1  CTAGGAACACAGGCCTCTCTGGGTAGGAGCTTGAGATCATGCGTTGTGTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAACACAGGCCTCTCTGGGTAGGAGCTTGAGATCATGCGTTGTGTT  1045

seq1  CTCAGGGGACAAAGAAATGTAAATTTCAAAAGAAAGGATTATTGAAAGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGGACAAAGAAATGTAAATTTCAAAAGAAAGGATTATTGAAAGAA  1095

seq1  GCCATCCTTTCTTTGTTGCTGTTGTTGAATTC  1128
      ||||||||||||||||||||||||||||||||
seq2  GCCATCCTTTCTTTGTTGCTGTTGTTGAATTC  1127

seq1: chr14_28426774_28427911
seq2: B6Ng01-039P08.g_68_1177

seq1  GAATTCTCTTTTGCAAAGTATTTGCCTTAAGGATTTAGGATATATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTGCAAAGTATTTGCCTTAAGGATTTAGGATATATTTTTT  50

seq1  TGTCCCTATTTATATTCTGCAGTCCATAATTTGAGAGCCGTGGATGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTATTTATATTCTGCAGTCCATAATTTGAGAGCCGTGGATGTACT  100

seq1  GAAGGTATGACGACCTTTCCTCCCCAACCCTGAAACACCTGCTAGAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTATGACGACCTTTCCTCCCCAACCCTGAAACACCTGCTAGAACCC  150

seq1  ACCCCCACCCAGAGGCACACAGTGTCTGTCCAAGCCTTGGGAAGGGCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCCAGAGGCACACAGTGTCTGTCCAAGCCTTGGGAAGGGCATA  200

seq1  TGCCACTCTAAACAACATCTGACACGCCTCATGCTCCAATAAACTTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTCTAAACAACATCTGACACGCCTCATGCTCCAATAAACTTCACT  250

seq1  CTGGAACAAGGTCACAGAAGGAATGCATTTTGATCCTTACTCGCGGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACAAGGTCACAGAAGGAATGCATTTTGATCCTTACTCGCGGTATA  300

seq1  ATTTTGCTCTTAAAGAGAAATGCAGCATTTAAAAAGGCATGTCTCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTCTTAAAGAGAAATGCAGCATTTAAAAAGGCATGTCTCCTCTT  350

seq1  CTTATTTTTAGGACTGTTTTGCTTCCAAATGTTTTCTGGCCAGCGCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTAGGACTGTTTTGCTTCCAAATGTTTTCTGGCCAGCGCCCAG  400

seq1  CTTTTTATGTGTGTTCCTGAAACTTTAGAAAGAACAACAGCTTCTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGTGTGTTCCTGAAACTTTAGAAAGAACAACAGCTTCTGAAAG  450

seq1  TCACATTGGCCGTTGAGGAAATCTCAAAGCTGTCACAGAATATAGCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGGCCGTTGAGGAAATCTCAAAGCTGTCACAGAATATAGCCCTG  500

seq1  ACAACTGAATGTACTATGCATTGAGATGATGCTAATCTTCATGTATTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGAATGTACTATGCATTGAGATGATGCTAATCTTCATGTATTGAG  550

seq1  CATTTTCTATAGGTCTGCCACAGCCAAAGAAACTTTCCCAGCAATTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTATAGGTCTGCCACAGCCAAAGAAACTTTCCCAGCAATTTCTT  600

seq1  ATCTACTCGCTTCAAGTTATGTATGAAGCAAGTACTACTAATTATTCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCGCTTCAAGTTATGTATGAAGCAAGTACTACTAATTATTCTAT  650

seq1  GTGTTTTTTTTTTTTTTTTTGAGACAGGATCATGCTTAGTACGGCAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTTTTTTTTTTTTTGAGACAGGATCATGCTTAGTACGGCAAGCT  700

seq1  GTCCTCAAATTTGTCATCCTCTTAATCTTGTGGGTGCTGTGATTACAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAAATTTGTCATCCTCTTAATCTTGTGGGTGCTGTGATTACAAAC  750

seq1  AGATGTGGGTCATCACACCCAACTATCTGTCTTCACCCCCTCCTTATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGGGTCATCACACCCAACTATCTGTCTTCACCCCCTCCTTATGAT  800

seq1  TATCAGGAGTCTTACAGGAACTAAATTATCCAAGATTATATAACTTGTAA  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATCAGGAGTCTTACAGGGACTAAATTATCCAAGATTATATAACTTGTAA  850

seq1  ATGAATGGACTCGATGGAAAACTCAAATCTGACCGTTGATTATACTTTGC  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGAATGGACTCGATGGAAAACTCAAATCTGACCGTTGA-TATACTTTGC  899

seq1  TCCTTGTTGCAGATATTATAGAGCGGGAGGATTGAGTACTGGCTCTTCAG  950
      | |||| |||||||| |||||||||||| |||||||||||||||||||||
seq2  T-CTTG-TGCAGATA-TATAGAGCGGGA-GATTGAGTACTGGCTCTTCAG  945

seq1  ACAAATTTAAGTTCACTACCAATTGTACCTATGGCTCCAGGCTTCAACAT  1000
      || ||||||||||||||||||||||||||||||||| ||||||   ||||
seq2  AC-AATTTAAGTTCACTACCAATTGTACCTATGGCT-CAGGCT--CACAT  991

seq1  CTAGCACAAATATAATCTCCACTCAATTACACCCAAAATGTCTCAAACTG  1050
      ||||||||||| | |||||||||| |||||| |||||||||||| |||||
seq2  CTAGCACAAAT-TTATCTCCACTC-ATTACA-CCAAAATGTCTC-AACTG  1037

seq1  GTTTAAAGACCCTTTGAATGAGTGGATGAGTTCAAGGTCACTA-TACT-C  1098
      | |||||||||||||| |||| |||||        ||||| ||  ||| |
seq2  G-TTAAAGACCCTTTG-ATGA-TGGAT--------GGTCAGTACAACTCC  1076

seq1  AATGTGCTGGGCAAACTGGAGTGTGTGGGGCATAGTTTTT  1138
      ||||||||||   |||||     ||  ||||||||||| |
seq2  AATGTGCTGG--CAACTG----ATGGTGGGCATAGTTTGT  1110