BAC Information

Click to search

BAC

Clone NameB6Ng01-040D13
Chromosome14 (Build37)
Map Location 80,723,553 - 80,724,507
singlet/doubletsinglet
Overlap genenone
Upstream geneNarg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040D13.bB6Ng01-040D13.g
ACCDH867256DH867257
length9571,051
definitionDH867256|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D13, 5' end.DH867257|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatcatgtgcaggattgtgttttctactctacacaattgaatg
ctgtttgaaagacttcaaaacagactctggaggtttgggttgcacacaga
ggagtcctgctactgatttcctgaattaaatgcacacaggaaatccaaaa
ctcttgagctttcggtgatataggggctgcattttcttccttgaatgaca
aaatatttgaacatttttaaagggaaacttcaacaaagaaaccaagagaa
tgtagtgaatttcctcaggccccgattttaaaagtaaaatcacactaaag
tagcagggtatagtgatgcctcctaaaggtcattggcagcaaattgcccc
acagggtgtccttctttgagaaggttttagagttctacatttccatgtag
tatgtctgtgtgtgtgttttgtgcatatgtgtgtgcacacatgtgcgtgc
atgagcccggggatcacaggtcaacaacactggatgtaattcttcctcag
ataccatctcctttgtttggagacaggatccctcattgcccaggagctgc
ccccagtgtgctagacttctaaccaggggcctttgtatctttacctcccc
accttacaggtgtgtactatcatgcccagagttttattttctttttaaat
gtgggttctagggattgtcctctctggtttgcaaggcaaactttcacact
gatttatctgcccagcaacttgtgtagactcttaatgtcgatgacttgat
cttataagtgcttcatacatgacgatatggttaatgccaaccccaatggt
cccaggggattcaaataagactagtgagggcataatagggaagagtgact
acacagattaaaatgttggcttccctaaggacaaactctggcctcttcac
taatggtggactttgaaaaacgaacttagttgtctccatctgatggtggg
catggaa
gaattcagagatcaatctgcccttgttaagcacagacaatgaactagtgg
ggtgggacccttccctgaaattaccatttctgcctctcctgggccaaatc
ttgctttgtcctcagcagatcctgagcataaacaaacaaacaaacaaaca
aaaaaatgagttgggtgggatctccaacaaccacccgaaatctcttcatc
tccgtccttaatacttttctgacaagttggctctcagtgcagctgtattt
gctcctttagattcatgaaactcctcatataattcatattgcatccttag
ttttgaatagttgagaaattaggtattttcaaactcaagtatttaagagt
tctgccccatagcctcaagggttgtccagaaggtcccagtgtttaccatt
ttgtggagacatagccacattctctactcccggattcctgctgtttctaa
ttatcatagagtcatttaacaggaaggatattcctcagaagaatcctcca
ctgctagtactggttccagaaaatatgtacattattacacaaacaagcct
taagctctcagcagccatcgacactcctggaggctcacacctgggccctg
tcccagggtcaggaaccatgtcactctgttcccatcaaaaccatggtgca
ggacttgacactgctgcctgtctgtggagtccattccccaacagggttgt
cttgtcaggtctcagtgggataagatgtgcctaaccctgcagagacttga
tgtgccaaagtgggaggatacaagaggaaccatctcagctgagaaaggga
ggggaagcagttattgggatgtaaaaataaataataggaaagaaaggaga
aaaagtagtacaagcttttaaccagttatctctccagcttccacatcttc
tttcctcttatcttcttattgtcttttcagtttattcattagattaagta
taattacatcattactcttacgttcttcctcaaacctgcatgtacctctg
atccttcagttcaatatctctttctcattaattgttttaacaccattgat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80723553_80724507
seq2: B6Ng01-040D13.b_42_998

seq1  GAATTCCCATCATGTGCAGGATTGTGTTTTCAACTCTACACAATTGAATG  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAATTCCCATCATGTGCAGGATTGTGTTTTCTACTCTACACAATTGAATG  50

seq1  CTGTTTGAAAGACTTCAAAACAGACTCTGGAGGTTTGGGTTGCACACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGAAAGACTTCAAAACAGACTCTGGAGGTTTGGGTTGCACACAGA  100

seq1  GGAGTCCTGCTACTGATTTCCTGAATTAAATGCACACAGGAAATCCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTGCTACTGATTTCCTGAATTAAATGCACACAGGAAATCCAAAA  150

seq1  CTCTTGAGCTTTCGGTGATATAGGGGCTGCATTTTCTTCCTTGAATGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGCTTTCGGTGATATAGGGGCTGCATTTTCTTCCTTGAATGACA  200

seq1  AAATATTTGAACATTTTTAAAGGGAAACTTCAACAAAGAAACCAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGAACATTTTTAAAGGGAAACTTCAACAAAGAAACCAAGAGAA  250

seq1  TGTAGTGAATTTCCTCAGGCCCCGATTTTAAAAGTAAAATCACACTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGAATTTCCTCAGGCCCCGATTTTAAAAGTAAAATCACACTAAAG  300

seq1  TAGCAGGGTATAGTGATGCCTCCTAAAGGTCATTGGCAGCAAATTGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGGTATAGTGATGCCTCCTAAAGGTCATTGGCAGCAAATTGCCCC  350

seq1  ACAGGGTGTCCTTCTTTGAGAAGGTTTTAGAGTTCTACATTTCCATGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGTCCTTCTTTGAGAAGGTTTTAGAGTTCTACATTTCCATGTAG  400

seq1  TATGTCTGTGTGTGTGTTTTGTGCATATGTGTGTGCACACATGTGCGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGTGTGTGTGTTTTGTGCATATGTGTGTGCACACATGTGCGTGC  450

seq1  ATGAGCCCGGGGATCACAGGTCAACAACACTGGATGTAATTCTTCCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCCGGGGATCACAGGTCAACAACACTGGATGTAATTCTTCCTCAG  500

seq1  ATACCATCTCCTTTGTTTGGAGACAGGATCCCTCATTGCCCAGGAGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATCTCCTTTGTTTGGAGACAGGATCCCTCATTGCCCAGGAGCTGC  550

seq1  CCCCAGTGTGCTAGACTTCTAACCAGGGGCCTTTGTATCTTTACCTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGTGCTAGACTTCTAACCAGGGGCCTTTGTATCTTTACCTCCCC  600

seq1  ACCTTACAGGTGTGTACTATCATGCCCAGAGTTTTATTTTCTTTTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACAGGTGTGTACTATCATGCCCAGAGTTTTATTTTCTTTTTAAAT  650

seq1  GTGGGTTCTAGGGATTGTCCTCTCTGGTTTGCAAGGCAAACTTTCACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTCTAGGGATTGTCCTCTCTGGTTTGCAAGGCAAACTTTCACACT  700

seq1  GATTTATCTGCCCAGCAACTTGTGTAGACTCTTAATGTCGATGACTTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCTGCCCAGCAACTTGTGTAGACTCTTAATGTCGATGACTTGAT  750

seq1  CTTATAAGTGCTTCATACATGACGATATGGTTAATGCCAACCCCAATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAGTGCTTCATACATGACGATATGGTTAATGCCAACCCCAATGGT  800

seq1  CCCA-GGGATTCAAATAAGACTAGTGAGGGCATAATAGTGAAGAGTGACT  849
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCAGGGGATTCAAATAAGACTAGTGAGGGCATAATAGGGAAGAGTGACT  850

seq1  ACACAGATT-AAATGTTGGCTT-CCTAAGGTCAAACTCTGGCCTCTCCAC  897
      ||||||||| |||||||||||| ||||||| ||||||||||||||| |||
seq2  ACACAGATTAAAATGTTGGCTTCCCTAAGGACAAACTCTGGCCTCTTCAC  900

seq1  TAATGGTGGAACTTTGAAAAACGAACTTAGCTGTCTCCATCTGATGGTGG  947
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  TAATGGTGG-ACTTTGAAAAACGAACTTAGTTGTCTCCATCTGATGGTGG  949

seq1  GCATGGAA  955
      ||||||||
seq2  GCATGGAA  957