BAC Information

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BAC

Clone NameB6Ng01-040O24
Chromosome14 (Build37)
Map Location 109,753,462 - 109,905,405
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668761, Slitrk1
Downstream geneLOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040O24.bB6Ng01-040O24.g
ACCDH867753DH867754
length774144
definitionDH867753|Mus musculus domesticus DNA, BAC clone: B6Ng01-040O24, 5' end.DH867754|Mus musculus domesticus DNA, BAC clone: B6Ng01-040O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,753,462 - 109,754,235)(109,905,262 - 109,905,405)
sequence
gaattcttatcatttgacaaatgcaaggaaaggaaatgtgtcttcatcta
ccttaaaattattgttagttctttgacaatttcatatggcatattttcct
cataatcaccagtttcccaaattattacccaaatgcactctcctatattg
tattttaaatcctctctacatgtataagatatttgtgtttgtatttatgc
acctttgtgtgtaagtttaaatacagttgagcctcggcatacctattgag
ggtcagaaagtaccataggttgtaagactttacggccaaccttatttgaa
actggatttctggttttgtagtatacataccaattgtttcagtactcaag
ctttccgaattctctgcttctgactctcatctttccagagaaagttggag
gtctcagaacttgccacaccatctagatgttaatgtgctacgatgattcg
atttcagatcctcaagcttttgcagcagatactctatcccatagactatg
cccctagccataaagtggcattttaatatatagtggaatattttaaaaat
aaaatggtccaaactaagcatgtgattataaaaactgcatcaccccagat
agtcttataatttttactcaaatttacttgcaatgtttactaaaacatta
attggctaccatgtttattgcagtatatatgaacttcacaggaaggactg
ggaagagactcaacttggggaatatggggaagcaccctcatagaagcagg
ggaggggataggaaagggggtttg
aatggtgattttgtttttgtggtgtttgtttgtttgttttgggctcgttg
gctcttcctgtaagtctttgacattttctgattctgtatcttaatgatgt
atgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgttgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109753462_109754235
seq2: B6Ng01-040O24.b_40_813

seq1  GAATTCTTATCATTTGACAAATGCAAGGAAAGGAAATGTGTCTTCATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCATTTGACAAATGCAAGGAAAGGAAATGTGTCTTCATCTA  50

seq1  CCTTAAAATTATTGTTAGTTCTTTGACAATTTCATATGGCATATTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATTATTGTTAGTTCTTTGACAATTTCATATGGCATATTTTCCT  100

seq1  CATAATCACCAGTTTCCCAAATTATTACCCAAATGCACTCTCCTATATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCACCAGTTTCCCAAATTATTACCCAAATGCACTCTCCTATATTG  150

seq1  TATTTTAAATCCTCTCTACATGTATAAGATATTTGTGTTTGTATTTATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAATCCTCTCTACATGTATAAGATATTTGTGTTTGTATTTATGC  200

seq1  ACCTTTGTGTGTAAGTTTAAATACAGTTGAGCCTCGGCATACCTATTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGTGTGTAAGTTTAAATACAGTTGAGCCTCGGCATACCTATTGAG  250

seq1  GGTCAGAAAGTACCATAGGTTGTAAGACTTTACGGCCAACCTTATTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAAAGTACCATAGGTTGTAAGACTTTACGGCCAACCTTATTTGAA  300

seq1  ACTGGATTTCTGGTTTTGTAGTATACATACCAATTGTTTCAGTACTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATTTCTGGTTTTGTAGTATACATACCAATTGTTTCAGTACTCAAG  350

seq1  CTTTCCGAATTCTCTGCTTCTGACTCTCATCTTTCCAGAGAAAGTTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCGAATTCTCTGCTTCTGACTCTCATCTTTCCAGAGAAAGTTGGAG  400

seq1  GTCTCAGAACTTGCCACACCATCTAGATGTTAATGTGCTACGATGATTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGAACTTGCCACACCATCTAGATGTTAATGTGCTACGATGATTCG  450

seq1  ATTTCAGATCCTCAAGCTTTTGCAGCAGATACTCTATCCCATAGACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATCCTCAAGCTTTTGCAGCAGATACTCTATCCCATAGACTATG  500

seq1  CCCCTAGCCATAAAGTGGCATTTTAATATATAGTGGAATATTTTAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGCCATAAAGTGGCATTTTAATATATAGTGGAATATTTTAAAAAT  550

seq1  AAAATGGTCCAAACTAAGCATGTGATTATAAAAACTGCATCACCCCAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTCCAAACTAAGCATGTGATTATAAAAACTGCATCACCCCAGAT  600

seq1  AGTCTTATAATTTTTACTCAAATTTACTTGCAATGTTTACTAAAACATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATAATTTTTACTCAAATTTACTTGCAATGTTTACTAAAACATTA  650

seq1  ATTGGCTACCATGTTTATTGCAGTATATATGAACTTCACAGGAAGGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTACCATGTTTATTGCAGTATATATGAACTTCACAGGAAGGACTG  700

seq1  GGAAGAGACTCAACTTGGGGAATATGGGGAAGCACCCTCATAGAAGCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGACTCAACTTGGGGAATATGGGGAAGCACCCTCATAGAAGCAGG  750

seq1  GGAGGGGATAGGAAAGGGGGTTTG  774
      ||||||||||||||||||||||||
seq2  GGAGGGGATAGGAAAGGGGGTTTG  774

seq1: chr14_109905262_109905405
seq2: B6Ng01-040O24.g_76_219 (reverse)

seq1  CACACACAACACACACACACACACACACACACAGAGACACACATACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAACACACACACACACACACACACACAGAGACACACATACATCA  50

seq1  TTAAGATACAGAATCAGAAAATGTCAAAGACTTACAGGAAGAGCCAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATACAGAATCAGAAAATGTCAAAGACTTACAGGAAGAGCCAACGA  100

seq1  GCCCAAAACAAACAAACAAACACCACAAAAACAAAATCACCATT  144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAACAAACAAACAAACACCACAAAAACAAAATCACCATT  144