BAC Information

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BAC

Clone NameB6Ng01-043F02
Chromosome14 (Build37)
Map Location 71,622,480 - 71,730,305
singlet/doubletdoublet
Overlap geneLOC100043132
Upstream genePpp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2
Downstream geneLOC100043136, LOC668477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043F02.bB6Ng01-043F02.g
ACCDH869418DH869419
length1,188199
definitionDH869418|Mus musculus domesticus DNA, BAC clone: B6Ng01-043F02, 5' end.DH869419|Mus musculus domesticus DNA, BAC clone: B6Ng01-043F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,729,097 - 71,730,305)(71,622,480 - 71,622,678)
sequence
gaattccaaaagagctctgggcacaaagacagctttaaaagacagcattc
atggctcatcttttttagtaactgggtgactcaccctcgtccacataaag
cagagaaccttaatgttacagcctgctttgaagaagagctgcctctgttg
agttcaaagagaataaaaaactaggtcagttgcccagggtttttaaagaa
gaaaaaggaaacacacacacacaaacacacacacacacacacacacacac
acacacacacacacacacacacacacacacatgtttccaatgaagccacc
attgtcttggttcctaaccaaataaaataaataaactagtaggttttgaa
tttatatcaaagtagaagcctgaatgcccaagaaacacgagttatttaag
ctacttgtgctgtgactccctccctgtttccctctggctcagtgtgtggg
aacattctcggcctaaggaacaggaagagggaggatcatttcctgatgtg
ctggtgtcagcctccatcttccctcagggccagtcctgggacatggttac
tcacagaatcagcaactaatctctttttgtcccttatccatgcacttaca
cgtcaaatgctcatattctgacttaggaggcagttctatttcaaaaccac
tctgggactcagaggaagcacacccctatggatggtgaccatgttctcat
gaaaagccccaggccagtcactggcttcagagtgtctcacttctgtccgt
tttgcaattaggttgaaagcaatataattttcctccattggccaaggacc
tgctaactgtcatgacttaaatacagaatctggggtctaagttgatcttc
ttcctgctcagattctttctacatgactctaggtccattcctggagtcac
ctagctggtggcgtccatatccagctgcatgaatcaccctctagcatatt
tcttttcccattacttgcatccagtagaatttcccatgggttaccctttc
actagattctgagctcatggatggaagtgatacatctgactaatgtttta
aatgaaatgtctttctgacagagttcaaagattaatgcatgtgatcctat
aagaccatctaaatggttagatgggagtgctcatcttggcctcaattccc
atgtttacaagagcaggttgtgagcttgaatacaagct
atgaattgttctcatcactgtgggcgctgggggtgggggcaggagaggaa
aaggcactgccctcatatggcttttaacctaatgatgtgcacaaacagcc
caaactaattaacactgtataatctatttcagacaacagagcggtgccat
cctattctagaaagaggccaggctaaacagtggggggggggtgaatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71729097_71730305
seq2: B6Ng01-043F02.b_48_1235 (reverse)

seq1  AGCTATGTATTCATAGACTCAACAAACTTGCTCTCTGGTGAACATGGGGG  50
      |||| |||||||| || ||| |||| ||    |||| || |||||  |||
seq2  AGCT-TGTATTCA-AG-CTC-ACAACCT---GCTCTTGTAAACAT--GGG  41

seq1  AATTTGGGGGCAGATGAGCACTTTCCTATCTACCCCTTTTAGATGGTCTT  100
      ||||  ||   ||||||||||  ||| |||||  || |||||||||||||
seq2  AATTGAGGCCAAGATGAGCAC--TCCCATCTA-ACCATTTAGATGGTCTT  88

seq1  ATAGGGATCACCTGCATTTAATCTTTTGGACTCTAGTTCAAGAAAGACAA  150
      ||| ||||||| |||| |||||| |||| ||||| ||   |||||||| |
seq2  ATA-GGATCACATGCA-TTAATC-TTTGAACTCT-GT--CAGAAAGAC-A  131

seq1  TTTCATTTAAAACATTAGTCAGATGTTATCACTTCCATCCATGGAGCTCA  200
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  TTTCATTTAAAACATTAGTCAGATG-TATCACTTCCATCCAT-GAGCTCA  179

seq1  GAATCTAGTGAAA-GGTAACCCATGGGGAAATTCTACTGGATGCAAGTAA  249
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  GAATCTAGTGAAAGGGTAACCCAT-GGGAAATTCTACTGGATGCAAGTAA  228

seq1  TGGG-AAAGAAATATGCTAGAGGGTTGATTCATGCAGCTGGATATGGACG  298
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGGAAAAGAAATATGCTAGAGGG-TGATTCATGCAGCTGGATATGGACG  277

seq1  CCACCAGCTAGGTGACTCCAGGAATGGACCTAGAGTCATGTAGAAAGAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGCTAGGTGACTCCAGGAATGGACCTAGAGTCATGTAGAAAGAAT  327

seq1  CTGAGCAGGAAGAAGATCAACTTAGACCCCAGATTCTGTATTTAAGTCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGGAAGAAGATCAACTTAGACCCCAGATTCTGTATTTAAGTCAT  377

seq1  GACAGTTAGCAGGTCCTTGGCCAATGGAGGAAAATTATATTGCTTTCAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTAGCAGGTCCTTGGCCAATGGAGGAAAATTATATTGCTTTCAAC  427

seq1  CTAATTGCAAAACGGACAGAAGTGAGACACTCTGAAGCCAGTGACTGGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGCAAAACGGACAGAAGTGAGACACTCTGAAGCCAGTGACTGGCC  477

seq1  TGGGGCTTTTCATGAGAACATGGTCACCATCCATAGGGGTGTGCTTCCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTTTTCATGAGAACATGGTCACCATCCATAGGGGTGTGCTTCCTC  527

seq1  TGAGTCCCAGAGTGGTTTTGAAATAGAACTGCCTCCTAAGTCAGAATATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCCAGAGTGGTTTTGAAATAGAACTGCCTCCTAAGTCAGAATATG  577

seq1  AGCATTTGACGTGTAAGTGCATGGATAAGGGACAAAAAGAGATTAGTTGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGACGTGTAAGTGCATGGATAAGGGACAAAAAGAGATTAGTTGC  627

seq1  TGATTCTGTGAGTAACCATGTCCCAGGACTGGCCCTGAGGGAAGATGGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGTGAGTAACCATGTCCCAGGACTGGCCCTGAGGGAAGATGGAG  677

seq1  GCTGACACCAGCACATCAGGAAATGATCCTCCCTCTTCCTGTTCCTTAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACACCAGCACATCAGGAAATGATCCTCCCTCTTCCTGTTCCTTAGG  727

seq1  CCGAGAATGTTCCCACACACTGAGCCAGAGGGAAACAGGGAGGGAGTCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAATGTTCCCACACACTGAGCCAGAGGGAAACAGGGAGGGAGTCAC  777

seq1  AGCACAAGTAGCTTAAATAACTCGTGTTTCTTGGGCATTCAGGCTTCTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAGTAGCTTAAATAACTCGTGTTTCTTGGGCATTCAGGCTTCTAC  827

seq1  TTTGATATAAATTCAAAACCTACTAGTTTATTTATTTTATTTGGTTAGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATAAATTCAAAACCTACTAGTTTATTTATTTTATTTGGTTAGGA  877

seq1  ACCAAGACAATGGTGGCTTCATTGGAAACATGTGTGTGTGTGTGTGTGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGACAATGGTGGCTTCATTGGAAACATGTGTGTGTGTGTGTGTGTG  927

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTG  977

seq1  TTTCCTTTTTCTTCTTTAAAAACCCTGGGCAACTGACCTAGTTTTTTATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTCTTCTTTAAAAACCCTGGGCAACTGACCTAGTTTTTTATT  1027

seq1  CTCTTTGAACTCAACAGAGGCAGCTCTTCTTCAAAGCAGGCTGTAACATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAACTCAACAGAGGCAGCTCTTCTTCAAAGCAGGCTGTAACATT  1077

seq1  AAGGTTCTCTGCTTTATGTGGACGAGGGTGAGTCACCCAGTTACTAAAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTCTGCTTTATGTGGACGAGGGTGAGTCACCCAGTTACTAAAAA  1127

seq1  AGATGAGCCATGAATGCTGTCTTTTAAAGCTGTCTTTGTGCCCAGAGCTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCCATGAATGCTGTCTTTTAAAGCTGTCTTTGTGCCCAGAGCTC  1177

seq1  TTTTGGAATTC  1209
      |||||||||||
seq2  TTTTGGAATTC  1188

seq1: chr14_71622480_71622678
seq2: B6Ng01-043F02.g_74_272

seq1  ATGAATTGTTCTCATCACTGTGGGCGCTGGGGGTGGGGGCAGGAGAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGTTCTCATCACTGTGGGCGCTGGGGGTGGGGGCAGGAGAGGAA  50

seq1  AAGGCACTGCCCTCATATGGCTTTTAACCTAATGATGTGCACAAACAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTGCCCTCATATGGCTTTTAACCTAATGATGTGCACAAACAGCC  100

seq1  CAAACTAATTAACACTGTATAATCTATTTCAGACAACAGAGCGGTGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAATTAACACTGTATAATCTATTTCAGACAACAGAGCGGTGCCAT  150

seq1  CCTATTCTAGAAAGAGGCCAGGCTAAACAGTGGGGGGGGGGTGAATGAA  199
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTAGAAAGAGGCCAGGCTAAACAGTGGGGGGGGGGTGAATGAA  199