BAC Information

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BAC

Clone NameB6Ng01-043L15
Chromosome14 (Build37)
Map Location 47,851,873 - 48,020,300
singlet/doubletdoublet
Overlap geneWdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7
Upstream geneLOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1
Downstream geneLOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043L15.bB6Ng01-043L15.g
ACCDH869702DH869703
length914189
definitionDH869702|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L15, 5' end.DH869703|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,851,873 - 47,852,551)(48,020,112 - 48,020,300)
sequence
gaattctggaagagcagtaactgcttttaactactgaggcatctctacag
ggccccgtgttatttcttgattgttatattggagtataacctttgaaact
gcatttttttttcacacagtgtaatatccttgcagttaatccaaggtatt
gaatagatgaatagattttttgcttgtttgtttgtttggttctttggttc
tggtttttgaaggcaaggtttctctgtatagccctggctgtccaggcact
cactctgtagaccaggctggcctccaactcagagatccacctgcctctgc
tggggttaaaggcatgccctacccactgaccagtgagggtgtagagtttt
gctgctgttgcacagtatgctatttattacatgtaagtattattatttgt
tagatggtcacccactgagggatgtttagatagtgccctagttagcttct
gttgctggaataaaacactggctaaaagcagtgtggtggaggagagggtc
tgtgtggcttacaggttagagtaccatcaagggaagtcaagggaggaatt
caaggcagaaacctggaggcgggaactgaagcagggaccaaggagaaaag
ctgtttactgcctcccttctctggcttgctcagctacttatatagctgtg
gtagttttgaatgcaaatggctcccataggttcatatgtttgaatacttg
gtccctagtaagtggaacagtttgagaagggttaggagctatggtctttt
ggagctgtcactaggggtaggtttttgagcttttcaaaagactcccagtt
agctctttctacctctgctggtggaccaagatgtgagcatctactgctgc
catgctcccttgccatggtagtcaaagactctgaccctctgaagtgtaag
cccccataactctt
ctttaatctcagtgttcagaaggcagaggcaggtggatcatgaattcaag
gccagcctgctctacagagcaagttccaggacagctagggctacacatag
gaacccttactcaaaaatagaaaaacaaaacaagaaaaatatatatttgt
gtgtgtatgtatgtgtgtatgtgtatatgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_47851873_47852551
seq2: B6Ng01-043L15.b_44_722

seq1  GAATTCTGGAAGAGCAGTAACTGCTTTTAACTACTGAGGCATCTCTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAAGAGCAGTAACTGCTTTTAACTACTGAGGCATCTCTACAG  50

seq1  GGCCCCGTGTTATTTCTTGATTGTTATATTGGAGTATAACCTTTGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCGTGTTATTTCTTGATTGTTATATTGGAGTATAACCTTTGAAACT  100

seq1  GCATTTTTTTTTCACACAGTGTAATATCCTTGCAGTTAATCCAAGGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTTTTTCACACAGTGTAATATCCTTGCAGTTAATCCAAGGTATT  150

seq1  GAATAGATGAATAGATTTTTTGCTTGTTTGTTTGTTTGGTTCTTTGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGATGAATAGATTTTTTGCTTGTTTGTTTGTTTGGTTCTTTGGTTC  200

seq1  TGGTTTTTGAAGGCAAGGTTTCTCTGTATAGCCCTGGCTGTCCAGGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGAAGGCAAGGTTTCTCTGTATAGCCCTGGCTGTCCAGGCACT  250

seq1  CACTCTGTAGACCAGGCTGGCCTCCAACTCAGAGATCCACCTGCCTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTAGACCAGGCTGGCCTCCAACTCAGAGATCCACCTGCCTCTGC  300

seq1  TGGGGTTAAAGGCATGCCCTACCCACTGACCAGTGAGGGTGTAGAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTAAAGGCATGCCCTACCCACTGACCAGTGAGGGTGTAGAGTTTT  350

seq1  GCTGCTGTTGCACAGTATGCTATTTATTACATGTAAGTATTATTATTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTTGCACAGTATGCTATTTATTACATGTAAGTATTATTATTTGT  400

seq1  TAGATGGTCACCCACTGAGGGATGTTTAGATAGTGCCCTAGTTAGCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGTCACCCACTGAGGGATGTTTAGATAGTGCCCTAGTTAGCTTCT  450

seq1  GTTGCTGGAATAAAACACTGGCTAAAAGCAGTGTGGTGGAGGAGAGGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGGAATAAAACACTGGCTAAAAGCAGTGTGGTGGAGGAGAGGGTC  500

seq1  TGTGTGGCTTACAGGTTAGAGTACCATCAAGGGAAGTCAAGGGAGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGCTTACAGGTTAGAGTACCATCAAGGGAAGTCAAGGGAGGAATT  550

seq1  CAAGGCAGAAACCTGGAGGCGGGAACTGAAGCAGGGACCAAGGAGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGAAACCTGGAGGCGGGAACTGAAGCAGGGACCAAGGAGAAAAG  600

seq1  CTGTTTACTGCCTCCCTTCTCTGGCTTGCTCAGCTACTTATATAGCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTACTGCCTCCCTTCTCTGGCTTGCTCAGCTACTTATATAGCTGTG  650

seq1  GTAGTTTTGAATGCAAATGGCTCCCATAG  679
      |||||||||||||||||||||||||||||
seq2  GTAGTTTTGAATGCAAATGGCTCCCATAG  679

seq1: chr14_48020112_48020300
seq2: B6Ng01-043L15.g_75_263 (reverse)

seq1  CACACACACACATATACACATACACACATACATACACACACAAATATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACATATACACATACACACATACATACACACACAAATATATA  50

seq1  TTTTTCTTGTTTTGTTTTTCTATTTTTGAGTAAGGGTTCCTATGTGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTGTTTTGTTTTTCTATTTTTGAGTAAGGGTTCCTATGTGTAGC  100

seq1  CCTAGCTGTCCTGGAACTTGCTCTGTAGAGCAGGCTGGCCTTGAATTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGTCCTGGAACTTGCTCTGTAGAGCAGGCTGGCCTTGAATTCAT  150

seq1  GATCCACCTGCCTCTGCCTTCTGAACACTGAGATTAAAG  189
      |||||||||||||||||||||||||||||||||||||||
seq2  GATCCACCTGCCTCTGCCTTCTGAACACTGAGATTAAAG  189