BAC Information

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BAC

Clone NameB6Ng01-044D17
Chromosome14 (Build37)
Map Location 3,594,437 - 3,595,631
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682, LOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555
Downstream geneLOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044D17.bB6Ng01-044D17.g
ACCDH870046DH870047
length1,1811,190
definitionDH870046|Mus musculus domesticus DNA, BAC clone: B6Ng01-044D17, 5' end.DH870047|Mus musculus domesticus DNA, BAC clone: B6Ng01-044D17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtcagccagggccatacagagaaaccctgtctcaaaaaaca
aaacaagcaaacaaacaaaacaaaaacaaaaacaaaaacaaaatacagga
tctggaagtatttgaggggccagggtccactcattaaatgaccacccatt
agaagatttcaacagctcttagacatgtcaggaaatgactaagagctata
aggaaaagtgtgttgcactctaaagcaaatatctatgaattgcgttattc
attttaacttgtcaaatttagggtagggaatgactgataaaggagagtta
tgcagaatggtagcgttgcaacaaataaggcctcattaataaaatctcta
ctcttccaaagatgccttacgtagctgagatctgggaggtcacatactac
aataactgtgctttatatctagttgtgtcagagcatggaggaatattttt
gggtgactatttaaatataaatgtgttcaggctgcattagacttcatgaa
ctgcttctttcacttagcattgttttcaggattgatccatgttacagatg
tatcaattctttgtctactatatttttttataacctgctgggggaaagcc
ttcaacagtctcacccacccatgaaccttgtgaaccttgttaattatgaa
catgataagatagttccatagtcccatagataattttagacccattagta
aacaggtggtaaaatatgtacatctgcatatataaaatggatttaaatgg
agttactctatactgacaagagagtttctcacccaaaaatttatctagta
aaaatgtcccatagatacaatcccttcaaaaatatggaataatcccatgg
ctcatgggtagcctccaaaactcaatgttaaggtccttttgctgaagaca
ttatatccctgagtcataggacatggagaactcaatctggtactaacctg
gaaggttcatccctgcctgattacattcacaatatagatatggccttcat
gctaacagtgagaaaatatcaaccatttcctcaacgtgtaccctgtgatt
acatgttcctcagcagcaatcacgattccaagtgaatatattgtgaatgt
tatgggagtaccaaacctttcacacttagattccagttccacattattta
tgtgtgtgtgactggtctaatatgttatgtg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtagagaaagagggacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccagaggatccagcaatacctctcctgggc
atatatcaagaagatgccccaactggtaagaaggacacatgctccactct
gttcatagcagccttatctataataaccagaagctggaaggaacccagat
gcccctcaacagaagaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaaatgtggacactatgcccatccttataagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccatatccggggatccatctcataatc
aggttccaaatgctgacaccttacatacactagcaagattatgctgaaat
gaccctgatatagctgtctcttttcagagtatgcctgggcgtagcaaaca
tagaagtggatgctcacagtcgctattgggatggatcacatgggccccta
ttgatggagctagagaagtacccaagaagctaaaggatctgcaaccctta
taggtggaacaacataatgaacctaaccagtacccggagcctctttgacc
ttagcctgcattatttattcaaaagatggcctaggcagtcatcactggga
aagaagagcccattggaaactcaactttatatgccagttcagggtaaggt
catgggccatagggtgagtgtggtgggtgtaggtgaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3594437_3595631
seq2: B6Ng01-044D17.b_43_1223

seq1  GAATTCCAGGTCAGCCAGGGCCATACAGAGAAACCCTGTCTCAAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCCAGGGCCATACAGAGAAACCCTGTCTCAAAAAACA  50

seq1  AAACAAGCAAACAAACAAAACAAAAACAAAAACAAAAACAAAATACAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGCAAACAAACAAAACAAAAACAAAAACAAAAACAAAATACAGGA  100

seq1  TCTGGAAGTATTTGAGGGGCCAGGGTCCACTCATTAAATGACCACCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGTATTTGAGGGGCCAGGGTCCACTCATTAAATGACCACCCATT  150

seq1  AGAAGATTTCAACAGCTCTTAGACATGTCAGGAAATGACTAAGAGCTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTTCAACAGCTCTTAGACATGTCAGGAAATGACTAAGAGCTATA  200

seq1  AGGAAAAGTGTGTTGCACTCTAAAGCAAATATCTATGAATTGCGTTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGTGTGTTGCACTCTAAAGCAAATATCTATGAATTGCGTTATTC  250

seq1  ATTTTAACTTGTCAAATTTAGGGTAGGGAATGACTGATAAAGGAGAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACTTGTCAAATTTAGGGTAGGGAATGACTGATAAAGGAGAGTTA  300

seq1  TGCAGAATGGTAGCGTTGCAACAAATAAGGCCTCATTAATAAAATCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATGGTAGCGTTGCAACAAATAAGGCCTCATTAATAAAATCTCTA  350

seq1  CTCTTCCAAAGATGCCTTACGTAGCTGAGATCTGGGAGGTCACATACTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCAAAGATGCCTTACGTAGCTGAGATCTGGGAGGTCACATACTAC  400

seq1  AATAACTGTGCTTTATATCTAGTTGTGTCAGAGCATGGAGGAATATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTGTGCTTTATATCTAGTTGTGTCAGAGCATGGAGGAATATTTTT  450

seq1  GGGTGACTATTTAAATATAAATGTGTTCAGGCTGCATTAGACTTCATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACTATTTAAATATAAATGTGTTCAGGCTGCATTAGACTTCATGAA  500

seq1  CTGCTTCTTTCACTTAGCATTGTTTTCAGGATTGATCCATGTTACAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTTCACTTAGCATTGTTTTCAGGATTGATCCATGTTACAGATG  550

seq1  TATCAATTCTTTGTCTACTATATTTTTTTATAACCTGCTGGGGGAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTCTTTGTCTACTATATTTTTTTATAACCTGCTGGGGGAAAGCC  600

seq1  TTCAACAGTCTCACCCACCCATGAACCTTGTGAACCTTGTTAATTATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAGTCTCACCCACCCATGAACCTTGTGAACCTTGTTAATTATGAA  650

seq1  CATGATAAGATAGTTCCATAGTCCCATAGATAATTTTAGACCCATTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAAGATAGTTCCATAGTCCCATAGATAATTTTAGACCCATTAGTA  700

seq1  AACAGGTGGTAAAATATGTACATCTGCATATATAAAATGGATTTAAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTGGTAAAATATGTACATCTGCATATATAAAATGGATTTAAATGG  750

seq1  AGTTACTCTATACTGACAAGAGAGTTTCTCACCCAAAAATTTATCTAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTCTATACTGACAAGAGAGTTTCTCACCCAAAAATTTATCTAGTA  800

seq1  AAAATGTCCCATAGATACAATCCCTTCAAAAATATGGAATAATCCCATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCCCATAGATACAATCCCTTCAAAAATATGGAATAATCCCATGG  850

seq1  CTCATGGTTAGCCTCCAAAACTCAATGTTAAGGTCCTTTTGCTGAAGACA  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGGTAGCCTCCAAAACTCAATGTTAAGGTCCTTTTGCTGAAGACA  900

seq1  TTATATCCTTGAGTCATAGGACATGGAGAACTCAATCTGGTACTAACCTG  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCCCTGAGTCATAGGACATGGAGAACTCAATCTGGTACTAACCTG  950

seq1  GAAGGTTCATCCCTGCCTGATAACATTCACAATATTAGGATATGGCCTTC  1000
      ||||||||||||||||||||| |||||||||||||   ||||||||||||
seq2  GAAGGTTCATCCCTGCCTGATTACATTCACAATAT--AGATATGGCCTTC  998

seq1  ATGCTAACAGTGAGAAAATAATCAACCATTTCCTCAACAGTGAACCCTGT  1050
      ||||||||||||||||||| |||||||||||||||||| ||| |||||||
seq2  ATGCTAACAGTGAGAAAAT-ATCAACCATTTCCTCAAC-GTGTACCCTGT  1046

seq1  GATTAACAATGTTCCTCAGCCAGCAAATCACGATCCCAAGTGAAATAGTA  1100
      |||||   ||||||||||| |||| ||||||||| ||||||| |||| ||
seq2  GATTA--CATGTTCCTCAG-CAGC-AATCACGATTCCAAGTG-AATA-TA  1090

seq1  GTGTGAATGTTATGGGAGTAACCAACCCTTTCCACAC-TAGATTCAAAGT  1149
       |||||||||||||||||| ||||| ||||| ||||| |||||||  |||
seq2  TTGTGAATGTTATGGGAGT-ACCAAACCTTT-CACACTTAGATTC-CAGT  1137

seq1  TCCACATTTATTTATGTTGATGTTGACTGGGCTAAATATG-TATGTG  1195
      |||||| ||||||||||   || ||||||| || |||||| ||||||
seq2  TCCACA-TTATTTATGTGTGTG-TGACTGGTCT-AATATGTTATGTG  1181