BAC Information

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BAC

Clone NameB6Ng01-044O06
Chromosome14 (Build37)
Map Location 80,146,888 - 80,147,708
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1
Downstream genePcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044O06.bB6Ng01-044O06.g
ACCDH870513DH870514
length912828
definitionDH870513|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O06, 5' end.DH870514|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatggtgctacccaactgcaatgtcaataaacattaacaatggc
cagtattgcaagatatccctataggtacattagtagagcttatgtctttg
tagtaataaacagctgtctaatttgacttaaggcatactcagcaagaggg
aaaccgtgcatattctgtaaacctaaccaactgcccaggactagtcaggt
cctagatcttagaggagaacctactactgttactcttctgaaccaatgta
atccctaactaattcctattatagtctacataattgcccttagagccaca
aacatgtgtcactctcaccctttttcaaagcttctctttgaacagatgaa
gagagcatcatagaaagtgataactggcccaaatgtggagaacaactgac
tgtagggtggccagtcccaactgagacacctacaataaacctctgatatc
taagactccaaaaacatggcagcagagggagtagaaagattctgtgagcc
aaaggtccaggaagtgtgctgcaaaattgtgtctcctagaaatgacaggg
aagctacagccatgaaacctcaacagtggcctaagaacacctgaacagtg
acaacactaatagacatgctaacatggaagaggaaaactgcatggggccc
cagccctaagcaaagaaccacggatacctaatgactactgaggaggataa
ttggtcttcccaggggtgaggcccctaattggttaattaataccaagtgg
acattcctggaatcatatccatgcaactaacactgaactgtctcggcagg
ctatatttattatatatttacatacatatgtagtgattacagttaaactt
aaaaagaccatcaatttgtatgggagtaggaagaagtcatgggagggggt
tagaggggaaat
gaattcaaggaggatgaagttaatgctaaccctaacaggttaaaggagag
cagagatagaggaatgaacaggtcagttgatgagagtttagttaatgcga
taaagatgacataccaatttgttatccattactgtcttacttttttaatg
ctgtgataaaacatgatgaccaaagcaatttatagaggaatgtttaattt
gagagcctatggtttcagagggtcagagtccatggccatcatggcctgaa
gcatggcggcaggcaggcagggatagcactggtgcagcagctgagagctt
acatcttcatccacaaacatgaggtagaaagagacatcagggaatagtgt
gggcttttgaaacctccaagcctgtccccagtgacataccttctccaaca
aggccacaccccttaatccttcccaaacagttccaccaactggggaccaa
gatttcaaatatatgagcctatgggagccgtttttgttcaaaccattaca
agtatcagatgatcatcattgaagatatacacccaagtaacattatacag
gctgagcaggttatatttatgtatagaaataaatgagaaaaaggaggcca
tgaatttgaaagagaataagaaaaggtctgtgggatggtttggagggagg
aaatgatgtagttatattataatctcaaaatacaaaacaaataattgaaa
gaaaaaaagaacaaacacattaaaactttttttaaaaaatggcatttcag
ttactggggaaacaatgttggaggcagcacttactttcatctttaagaaa
aacattaggatggcaagcttgcaccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80146888_80147708
seq2: B6Ng01-044O06.g_67_893

seq1  GAATTCAAGGAGGATGAAGTTAATGCTAACCCTAACAGGTTAAAGGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAGGATGAAGTTAATGCTAACCCTAACAGGTTAAAGGAGAG  50

seq1  CAGAGATAGAGGAATGAACAGGTCAGTTGATGAGAGTTTAGTTAATGCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATAGAGGAATGAACAGGTCAGTTGATGAGAGTTTAGTTAATGCGA  100

seq1  TAAAGATGACATACCAATTTGTTATCCATTACTGTCTTACTTTTTTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGACATACCAATTTGTTATCCATTACTGTCTTACTTTTTTAATG  150

seq1  CTGTGATAAAACATGATGACCAAAGCAATTTATAGAGGAATGTTTAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATAAAACATGATGACCAAAGCAATTTATAGAGGAATGTTTAATTT  200

seq1  GAGAGCCTATGGTTTCAGAGGGTCAGAGTCCATGGCCATCATGGCCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCTATGGTTTCAGAGGGTCAGAGTCCATGGCCATCATGGCCTGAA  250

seq1  GCATGGCGGCAGGCAGGCAGGGATAGCACTGGTGCAGCAGCTGAGAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCGGCAGGCAGGCAGGGATAGCACTGGTGCAGCAGCTGAGAGCTT  300

seq1  ACATCTTCATCCACAAACATGAGGTAGAAAGAGACATCAGGGAATAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCATCCACAAACATGAGGTAGAAAGAGACATCAGGGAATAGTGT  350

seq1  GGGCTTTTGAAACCTCCAAGCCTGTCCCCAGTGACATACCTTCTCCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTTGAAACCTCCAAGCCTGTCCCCAGTGACATACCTTCTCCAACA  400

seq1  AGGCCACACCCCTTAATCCTTCCCAAACAGTTCCACCAACTGGGGACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACACCCCTTAATCCTTCCCAAACAGTTCCACCAACTGGGGACCAA  450

seq1  GATTTCAAATATATGAGCCTATGGGAGCCGTTTTTGTTCAAACCATTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAAATATATGAGCCTATGGGAGCCGTTTTTGTTCAAACCATTACA  500

seq1  AGTATCAGATGATCATCATTGAAGATATACACCCAAGTAACATTATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCAGATGATCATCATTGAAGATATACACCCAAGTAACATTATACAG  550

seq1  GCTGAGCAGGTTATATTTATGTATAGAAATAAATGAGAAAAAGGAGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCAGGTTATATTTATGTATAGAAATAAATGAGAAAAAGGAGGCCA  600

seq1  TGAATTTGAAAGAGAATAAGAAAAGGTCTGTGGGATGGTTTGGAGGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGAAAGAGAATAAGAAAAGGTCTGTGGGATGGTTTGGAGGGAGG  650

seq1  AAATGATGTAGTTATATTATAATCTCAAAATACAAAACAAATAATTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGTAGTTATATTATAATCTCAAAATACAAAACAAATAATTGAAA  700

seq1  G-AAAAAAGAACAAACACATTAAA--CTTTTTTAAAAAATGGCATTTCAG  747
      | ||||||||||||||||||||||   |||||||||||||||||||||||
seq2  GAAAAAAAGAACAAACACATTAAAACTTTTTTTAAAAAATGGCATTTCAG  750

seq1  TTACT-GGGAAACAATGTTGGAGGCAGCACTTAC-TTCATCTTTAAGAAA  795
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  TTACTGGGGAAACAATGTTGGAGGCAGCACTTACTTTCATCTTTAAGAAA  800

seq1  AACATTAGGAT-GCAAGCTTGCACCAT  821
      ||||||||||| |||||||||||||||
seq2  AACATTAGGATGGCAAGCTTGCACCAT  827