BAC Information

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BAC

Clone NameB6Ng01-044O09
Chromosome14 (Build37)
Map Location 62,067,028 - 62,186,201
singlet/doubletdoublet
Overlap geneLOC100042933, EG432865, 6330409N04Rik, LOC100042941
Upstream geneEG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19, Sacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3
Downstream geneTrim13, Kcnrg, LOC668253, Dleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044O09.bB6Ng01-044O09.g
ACCDH870519DH870520
length7241,081
definitionDH870519|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O09, 5' end.DH870520|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,067,028 - 62,067,747)(62,185,186 - 62,186,201)
sequence
gaattcagaagctccatcaaataaggcagaggaagggggaaggggagggg
cttggaagattgtctctcaaaatggtttgggggggcagggaggatggcag
aggagatggcagggggcgggcgggggaggaatggcagttttcaatgtcag
tttcagtttgtttttttgtttgtttttaagcctgtttcatggtttgcctt
gcacatggttttatgtatggtatctcagattatatagtagcttacataca
ttatctaatttaaagcttacattaactatgttctgttccttcttctgact
tccatgggcaccaggcatgcacgtggtgtgcatacatacaggcagacaat
tttaaaaattcacaacatccagggtttgagctgtattagtgaaggaaact
atataccacagtgaaggaggtatataccactctgctctgcatactggact
gtactctctgtaactcagattgggacatggacatggtcaccatagtcaac
actctggccactttgagctgtccaggcagcgttgtcagatagaaacacca
gttctcagagccctgcgcacagtttacacagtgggagccttctgacacaa
gggcccctgggaaacagatgcacggtgagtctgaggctcttgctgctcag
agcaagagcctttttcccgggcatcttctcaccccagcacagagaaagtt
cagtgagaaaccctagaactcata
gaattctaagccagccagggctacacagtgagactcaactactgttccag
caggaaaaaaaatgtcatccagcctggaccaatgagatgtcttatcaagt
aaaggcacttgtctccaagtttgatgaccaaagcctgagctccaatccat
ccatacagtggatggagcgacctggctccacaggttagcctctgatcccc
acagggtgcaacacccatgcatgtacgtacgtacacacacacacacacac
acacacacaattaatgtaattctttaattcattaaactctatactcaaat
attagtgtactttttggtattattagtttcctcttgtggttataacgaga
caaacatctatttaaatcccaaatatagtgatttaaagcagtatacattt
attagtgtctacgagttacaggtctgagttgtggactacattccactggt
ccacttgtccactccagtctctagatgctacatggtatttattctgcctt
catcatgccctctcctccccctcttttaaggatgtccatgtgattacatt
gggcccatgtgaatgctttctctagcttagctctttatttaacccaatct
ttttaaaccacagaaaggaacatgttcaaaggcaagttcagctgcaaagc
aagcatgagctgcagccttggtccaagaccacagcttctgtgtactaacc
ctgaggaaacatccccagaagatttcacctcaaagatgctgggctcttct
taatcatagctgattcttcagccacctcagctgaccagaaccgcagattc
tttttttttttttctttctcttttttctttttttgagacagggtttcttt
ctgtagccctggctgtcctggaactcactttgtagaccaaggctggcctt
gaactcagaaatctacctgccttctgcctgccaagtgctgggattaaagg
catgcgccaccaccgcccgcttgcactcattgccccttatcttcccacag
aagttcaaactcaaacttttttgccacacagggagatcagtcttgccaag
gaatgtcatcaatttctagtctaatttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_62067028_62067747
seq2: B6Ng01-044O09.b_46_769

seq1  GAATTCAGAAGCTCCATCAAATAAGGCAGAGGAAGGGGGAAGGGGAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGCTCCATCAAATAAGGCAGAGGAAGGGGGAAGGGGAGGGG  50

seq1  CTTGGAAGATTGTCTCTCAAAATGGTTTGGGGGGGCAGGGAGGATGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAGATTGTCTCTCAAAATGGTTTGGGGGGGCAGGGAGGATGGCAG  100

seq1  AGGAGATGGCAGGGGGCGGGCGGGGGAGGAATGGCAGTTTTCAATGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGGCAGGGGGCGGGCGGGGGAGGAATGGCAGTTTTCAATGTCAG  150

seq1  TTTCAGTTTGTTTTTTTGTTTGTTTTTAAGCCTGTTTCATGGTTTGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTGTTTTTTTGTTTGTTTTTAAGCCTGTTTCATGGTTTGCCTT  200

seq1  GCACATGGTTTTATGTATGGTATCTCAGATTATATAGTAGCTTACATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGTTTTATGTATGGTATCTCAGATTATATAGTAGCTTACATACA  250

seq1  TTATCTAATTTAAAGCTTACATTAACTATGTTCTGTTCCTTCTTCTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAATTTAAAGCTTACATTAACTATGTTCTGTTCCTTCTTCTGACT  300

seq1  TCCATGGGCACCAGGCATGCACGTGGTGTGCATACATACAGGCAGACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGCACCAGGCATGCACGTGGTGTGCATACATACAGGCAGACAAT  350

seq1  TTTAAAAATTCACAACATCCAGGGTTTGAGCTGTATTAGTGAAGGAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTCACAACATCCAGGGTTTGAGCTGTATTAGTGAAGGAAACT  400

seq1  ATATACCACAGTGAAGGAGGTATATACCACTCTGCTCTGCATACTGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCACAGTGAAGGAGGTATATACCACTCTGCTCTGCATACTGGACT  450

seq1  GTACTCTCTGTAACTCAGATTGGGACATGGACATGGTCACCAGAGTCAAC  500
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTACTCTCTGTAACTCAGATTGGGACATGGACATGGTCACCATAGTCAAC  500

seq1  ACTCTGGCCACTTTGAGCTGTCCAGGCAGCGTTGTCAGATAGAAACACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGCCACTTTGAGCTGTCCAGGCAGCGTTGTCAGATAGAAACACCA  550

seq1  GTTCTCAGAGCCCTGCGCACAG-TTACACAGTGGGAGCCTTCTGACACAA  599
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTTCTCAGAGCCCTGCGCACAGTTTACACAGTGGGAGCCTTCTGACACAA  600

seq1  GGGCCCCTGGGAAACAGATGCACGGTGAGTCTGAGGCTCTTGCTGCTCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCCTGGGAAACAGATGCACGGTGAGTCTGAGGCTCTTGCTGCTCAG  650

seq1  AGCAAGAGCC-TTTTCCCGGGCATCTTCCCA-CCCAGCACAGAGAAAGTT  697
      |||||||||| ||||||||||||||||| || ||||||||||||||||||
seq2  AGCAAGAGCCTTTTTCCCGGGCATCTTCTCACCCCAGCACAGAGAAAGTT  700

seq1  CCAGGAG-AACCCTAGAACTCAAA  720
      |   ||| |||||||||||||| |
seq2  CAGTGAGAAACCCTAGAACTCATA  724

seq1: chr14_62185186_62186201
seq2: B6Ng01-044O09.g_137_1152 (reverse)

seq1  AAACAAATTAGACTAGAAACTGATGGACTTTCTGTGGCAGACCTGATCTT  50
      ||||||||||||||||||| |||| ||| |||  |||||   ||||||| 
seq2  AAACAAATTAGACTAGAAATTGAT-GACATTCCTTGGCAAGACTGATCTC  49

seq1  CCTGTTGTGGCAGAAAAGTGTAGAGTTTGAACTTCTGTGGGAAGATAA-G  99
      |||| ||||||| |||||| | |||||||||||||||||||||||||| |
seq2  CCTG-TGTGGCAAAAAAGT-TTGAGTTTGAACTTCTGTGGGAAGATAAGG  97

seq1  AGCACTGAGTGCAGCCGGGCGGTGGTGGCGCATGCCTTTAATCCCAGCAC  149
       ||| ||||||||  |||||||||||||||||||||||||||||||||||
seq2  GGCAATGAGTGCAAGCGGGCGGTGGTGGCGCATGCCTTTAATCCCAGCAC  147

seq1  TTGGCAGGCAG-AGGCAGGTAGATTTCTGAGTTCAAGGCCAGCC-TGGTC  197
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  TTGGCAGGCAGAAGGCAGGTAGATTTCTGAGTTCAAGGCCAGCCTTGGTC  197

seq1  TACAAAGTGAGTTCCAGGACAGCCAGGGCTACAGAAAGAAACCCTGTCTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTGAGTTCCAGGACAGCCAGGGCTACAGAAAGAAACCCTGTCTC  247

seq1  AAAAAAAGAAAAAAGAGAAAGAAAAAAAAAAAAAGAATCTGCGGTTCTGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAAAAGAGAAAGAAAAAAAAAAAAAGAATCTGCGGTTCTGG  297

seq1  TCAGCTGAGGTGGCTGAAGAATCAGCTATGATTAAGAAGAGCCCAGCATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAGGTGGCTGAAGAATCAGCTATGATTAAGAAGAGCCCAGCATC  347

seq1  TTTGAGGTGAAATCTTCTGGGGATGTTTCCTCAGGGTTAGTACACAGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTGAAATCTTCTGGGGATGTTTCCTCAGGGTTAGTACACAGAAG  397

seq1  CTGTGGTCTTGGACCAAGGCTGCAGCTCATGCTTGCTTTGCAGCTGAACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCTTGGACCAAGGCTGCAGCTCATGCTTGCTTTGCAGCTGAACT  447

seq1  TGCCTTTGAACATGTTCCTTTCTGTGGTTTAAAAAGATTGGGTTAAATAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGAACATGTTCCTTTCTGTGGTTTAAAAAGATTGGGTTAAATAA  497

seq1  AGAGCTAAGCTAGAGAAAGCATTCACATGGGCCCAATGTAATCACATGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAAGCTAGAGAAAGCATTCACATGGGCCCAATGTAATCACATGGA  547

seq1  CATCCTTAAAAGAGGGGGAGGAGAGGGCATGATGAAGGCAGAATAAATAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTAAAAGAGGGGGAGGAGAGGGCATGATGAAGGCAGAATAAATAC  597

seq1  CATGTAGCATCTAGAGACTGGAGTGGACAAGTGGACCAGTGGAATGTAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGCATCTAGAGACTGGAGTGGACAAGTGGACCAGTGGAATGTAGT  647

seq1  CCACAACTCAGACCTGTAACTCGTAGACACTAATAAATGTATACTGCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTCAGACCTGTAACTCGTAGACACTAATAAATGTATACTGCTTT  697

seq1  AAATCACTATATTTGGGATTTAAATAGATGTTTGTCTCGTTATAACCACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTATATTTGGGATTTAAATAGATGTTTGTCTCGTTATAACCACA  747

seq1  AGAGGAAACTAATAATACCAAAAAGTACACTAATATTTGAGTATAGAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAACTAATAATACCAAAAAGTACACTAATATTTGAGTATAGAGTT  797

seq1  TAATGAATTAAAGAATTACATTAATTGTGTGTGTGTGTGTGTGTGTGTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATTAAAGAATTACATTAATTGTGTGTGTGTGTGTGTGTGTGTGT  847

seq1  GTACGTACGTACATGCATGGGTGTTGCACCCTGTGGGGATCAGAGGCTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGTACGTACATGCATGGGTGTTGCACCCTGTGGGGATCAGAGGCTAA  897

seq1  CCTGTGGAGCCAGGTCGCTCCATCCACTGTATGGATGGATTGGAGCTCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGAGCCAGGTCGCTCCATCCACTGTATGGATGGATTGGAGCTCAG  947

seq1  GCTTTGGTCATCAAACTTGGAGACAAGTGCCTTTACTTGATAAGACATCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGTCATCAAACTTGGAGACAAGTGCCTTTACTTGATAAGACATCT  997

seq1  CATTGGTCCAGGCTGGATG  1016
      |||||||||||||||||||
seq2  CATTGGTCCAGGCTGGATG  1016