BAC Information

Click to search

BAC

Clone NameB6Ng01-045E10
Chromosome14 (Build37)
Map Location 7,510,268 - 7,601,195
singlet/doubletdoublet
Overlap geneLOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918
Upstream geneLOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664
Downstream geneLOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045E10.bB6Ng01-045E10.g
ACCDH870782DH870783
length9571,037
definitionDH870782|Mus musculus domesticus DNA, BAC clone: B6Ng01-045E10, 5' end.DH870783|Mus musculus domesticus DNA, BAC clone: B6Ng01-045E10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,510,268 - 7,511,246)(7,600,140 - 7,601,195)
sequence
gaattcagtagccagctcctaaggcctgtagctttgaaaagcaaagccag
tctaagctggttcctgctaagtaaatgactgcaactcaacagcatctgca
gctgtagaggaaacccaggatgggtggaaatactgtgtaggcaaagaaag
gaaagctgcctcatttcccactaaaggcagctcaggggaaaagcctggtg
gaagcccattgcttctgagaaactttcaaggaatccccaatttaaaatag
tttctgacctactaactgcttctcctagttaaaagtgttcacaatggttc
tctgacctaagggacatccacttgtcttttctttgttcagtttgtttctt
tgttttgagggagtcccctagcacacctcaggcccaatctgacttagcat
ttatggcaggtctccagcatcaaactctatttctcaatatggctactaca
atttcaaatacatggcatattgtctcatttggtttataaaaagttccttg
actttctttagtgttttagattttcaaataatttctcccctgctgctcat
gaaatcccttttattactgttactttgagatcttcattggtgagccattg
tagtgcacaactttggttacagaattccagaggcagaggccagcagacct
ttgaaatgtgaggccagcctgggctatacaatgaaacttctatgtagaac
atatcaataatcttgttgaaagcttgcatgttggagtttaaggtatgagt
gctgccaagagctggaagccagtctgggctacattgtaacaggccgcaag
agctacacagcaaattcttgtttcaacaaacaacaaagcaagaaagagtc
tggccatacagtctatagatgctacagtcaggtaatagaaagagtaaagc
tgactctcagtcagtttctactatagtgcatacacaccccaagtacagag
acatgag
gaattcccatagctgtggagcaaaccaggcctgttacaggagcccattga
gggtcttgataatctaaagtactcacactatcttatctgtgtagcattca
gcgggactgttcttcaacatcattttctcagagttaaaatcagcctcagt
tggggttgggagaaatgaggaccttcagacggttctggtagtataaaatt
ggttatgtctgttagaagccatgttctgaaagtagaaaagaagtcctcat
tgacccagttcttccagaacaagtaggaggtatccacagagtctagggta
ttcagggttgtagtggtcctcagagaagccctgaaggagaagttatcctg
atgtccatttgctgaagaatgaaacggtactgtgtggtgcagcccttcca
tgaactcagtgtgagataatccatgcaagcttttgtccttcaactagtca
gctttttcttactcaaaatagccctgacacaatcacattctggggagaaa
ctggttcctttggatcctgttatagacagttcctattactctgggctcat
acctttggacaccaagtcagttaggtgatggaaaatggagatcctattga
aagaaattgtttactttgggacaagtctgaaacagtgagcaagaacaaga
ggctggtcaaccaccaacatgtaagtgtaggctgggaaacaaacctattc
tacacagccttgggaacttgctgagccagattggataataggacaagaac
cctgaattcccagaccggttttatgagtggaaagcatatcactgactgcg
ctgcctatatgctttgccccactaagtacctttcccattcaagatttggt
ttttttatgcctctaaggttcctgggaaattttatatttgtataaccgga
aactaacgggcactgcaatcaatatgctgtattgcttaacaccaataggt
gtgtttagaagttgccctaatagttctagatgtcagggtgttctgttttt
tcatgacctcactttagtcattgccgccttggaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7510268_7511246
seq2: B6Ng01-045E10.b_47_1003

seq1  GAATTCAGTAGCCAGCTCCTAAGGCCTGTAGCTTTGAAAAGCAAAGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCCAGCTCCTAAGGCCTGTAGCTTTGAAAAGCAAAGCCAG  50

seq1  TCTAAGCTGGTTCCTGCTAAGTAAATGACTGCAACTCAACAGCATCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTGGTTCCTGCTAAGTAAATGACTGCAACTCAACAGCATCTGCA  100

seq1  GCTGTAGAGGAAACCCAGGATGGGTGGAAATACTGTGTAGGCAAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAGGAAACCCAGGATGGGTGGAAATACTGTGTAGGCAAAGAAAG  150

seq1  GAAAGCTGCCTCATTTCCCACTAAAGGCAGCTCAGGGGAAAAGCCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGCCTCATTTCCCACTAAAGGCAGCTCAGGGGAAAAGCCTGGTG  200

seq1  GAAGCCCATTGCTTCTGAGAAACTTTCAAGGAATCCCCAATTTAAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCATTGCTTCTGAGAAACTTTCAAGGAATCCCCAATTTAAAATAG  250

seq1  TTTCTGACCTACTAACTGCTTCTCCTAGTTAAAAGTGTTCACAATGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACCTACTAACTGCTTCTCCTAGTTAAAAGTGTTCACAATGGTTC  300

seq1  TCTGACCTAAGGGACATCCACTTGTCTTTTCTTTGTTCAGTTTGTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTAAGGGACATCCACTTGTCTTTTCTTTGTTCAGTTTGTTTCTT  350

seq1  TGTTTTGAGGGAGTCCCCTAGCACACCTCAGGCCCAATCTGACTTAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAGGGAGTCCCCTAGCACACCTCAGGCCCAATCTGACTTAGCAT  400

seq1  TTATGGCAGGTCTCCAGCATCAAACTCTATTTCTCAATATGGCTACTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCAGGTCTCCAGCATCAAACTCTATTTCTCAATATGGCTACTACA  450

seq1  ATTTCAAATACATGGCATATTGTCTCATTTGGTTTATAAAAAGTTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATACATGGCATATTGTCTCATTTGGTTTATAAAAAGTTCCTTG  500

seq1  ACTTTCTTTAGTGTTTTAGATTTTCAAATAATTTCTCCCCTGCTGCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTAGTGTTTTAGATTTTCAAATAATTTCTCCCCTGCTGCTCAT  550

seq1  GAAATCCCTTTTATTACTGTTACTTTGAGATCTTCATTGGTGAGCCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCCTTTTATTACTGTTACTTTGAGATCTTCATTGGTGAGCCATTG  600

seq1  TAGTGCACAACTTTGGTTACAGAATTCCAGAGGCAGAGGCCAGCAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCACAACTTTGGTTACAGAATTCCAGAGGCAGAGGCCAGCAGACCT  650

seq1  TTGAAATGTGAGGCCAGCCTGGGCTATACAATGAAACTTCTATGTAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTGAGGCCAGCCTGGGCTATACAATGAAACTTCTATGTAGAAC  700

seq1  ATATCAATAATCTTGTTGAAAGCTTGCATGTTGGAGTTTAAGGTATGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATAATCTTGTTGAAAGCTTGCATGTTGGAGTTTAAGGTATGAGT  750

seq1  GCTGCCAAGAGCTGGAAGCCAGTCTGGGCTACATTGTAACAGGCCCGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTGCCAAGAGCTGGAAGCCAGTCTGGGCTACATTGTAACAGG-CCGCAA  799

seq1  GAGCTACACAGCAAATTCTTGTTTCAAACAAACAAACAAAAGCAAGAAAG  850
      ||||||||||||||||||||||||| |||||||||   ||||||||||||
seq2  GAGCTACACAGCAAATTCTTGTTTC-AACAAACAA--CAAAGCAAGAAAG  846

seq1  AGTCTTGGCCATACAGTCTATAGATGCTACAGTCAGGGTTAAATAGAAAG  900
      |||| ||||||||||||||||||||||||||||||||    |||||||| 
seq2  AGTC-TGGCCATACAGTCTATAGATGCTACAGTCAGG---TAATAGAAA-  891

seq1  GAGTAAAGCTGACCTCTCCAGTCAGTTTTCTACTTAATAAGGTGCCATAC  950
      |||||||||||| |||| ||||||| ||||||||  |||  ||| |||| 
seq2  GAGTAAAGCTGA-CTCT-CAGTCAG-TTTCTACT--ATA--GTG-CATA-  932

seq1  CACCACCCCCAAAGTACAAGAGACATGAG  979
         ||| ||| |||||| |||||||||||
seq2  ---CACACCCCAAGTAC-AGAGACATGAG  957

seq1: chr14_7600140_7601195
seq2: B6Ng01-045E10.g_68_1104 (reverse)

seq1  ATATTCCCAAGGCCGAGCAATGAACCTTAAAAGTGATGGTCATGAAAAAA  50
      ||||| |||||||   |||||||  ||  ||||||| ||||||| |||||
seq2  ATATT-CCAAGGC--GGCAATGA--CT--AAAGTGA-GGTCATG-AAAAA  41

seq1  ACAGAACACCCCTGTACATCTATGACTATTTTAGGGCACACTCTCAAACA  100
      |||||||| ||||| |||||||  ||||  |||||||| |||   |||||
seq2  ACAGAACA-CCCTG-ACATCTAGAACTA--TTAGGGCA-ACTTCTAAACA  86

seq1  CACCTATTTGTGTTTATGCAATACAAGCATATTGTATTGCAGTGCCCCGT  150
      |||||||| ||| ||| ||||||| ||||||||| ||||||||||||   
seq2  CACCTATTGGTG-TTAAGCAATAC-AGCATATTG-ATTGCAGTGCCC--G  131

seq1  TTAGTTTCCCGGTTAATACAAATATAAAAATCTCCCAGGAAACTTTAGAG  200
      ||||||| |||||| |||||||||| ||||| ||||||| ||| ||||||
seq2  TTAGTTT-CCGGTT-ATACAAATAT-AAAATTTCCCAGG-AACCTTAGAG  177

seq1  GCATAAAAAAA-CAAATCTTGAATGGGAAAGGTACTTAGT-GGGCAAAGC  248
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  GCATAAAAAAACCAAATCTTGAATGGGAAAGGTACTTAGTGGGGCAAAGC  227

seq1  ATATAGGCAGCGCAGTCAGTGATATGCTTTCCACTCAT-AAACCGGTCTG  297
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATATAGGCAGCGCAGTCAGTGATATGCTTTCCACTCATAAAACCGGTCTG  277

seq1  GGAA-TCAGGGTTCTTGTCCTATTATCCAATCTGGCTCAGCAAGTTCCCA  346
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCAGGGTTCTTGTCCTATTATCCAATCTGGCTCAGCAAGTTCCCA  327

seq1  AGGCTGTGTAGAATAGGTTTGTTTCCCAGCCTACACTTACATGTTGGTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGTAGAATAGGTTTGTTTCCCAGCCTACACTTACATGTTGGTGG  377

seq1  TTGACCAGCCTCTTGTTCTTGCTCACTGTTTCAGACTTGTCCCAAAGTAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGCCTCTTGTTCTTGCTCACTGTTTCAGACTTGTCCCAAAGTAA  427

seq1  ACAATTTCTTTCAATAGGATCTCCATTTTCCATCACCTAACTGACTTGGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCTTTCAATAGGATCTCCATTTTCCATCACCTAACTGACTTGGT  477

seq1  GTCCAAAGGTATGAGCCCAGAGTAATAGGAACTGTCTATAACAGGATCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAGGTATGAGCCCAGAGTAATAGGAACTGTCTATAACAGGATCCA  527

seq1  AAGGAACCAGTTTCTCCCCAGAATGTGATTGTGTCAGGGCTATTTTGAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACCAGTTTCTCCCCAGAATGTGATTGTGTCAGGGCTATTTTGAGT  577

seq1  AAGAAAAAGCTGACTAGTTGAAGGACAAAAGCTTGCATGGATTATCTCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGCTGACTAGTTGAAGGACAAAAGCTTGCATGGATTATCTCAC  627

seq1  ACTGAGTTCATGGAAGGGCTGCACCACACAGTACCGTTTCATTCTTCAGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTCATGGAAGGGCTGCACCACACAGTACCGTTTCATTCTTCAGC  677

seq1  AAATGGACATCAGGATAACTTCTCCTTCAGGGCTTCTCTGAGGACCACTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGACATCAGGATAACTTCTCCTTCAGGGCTTCTCTGAGGACCACTA  727

seq1  CAACCCTGAATACCCTAGACTCTGTGGATACCTCCTACTTGTTCTGGAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTGAATACCCTAGACTCTGTGGATACCTCCTACTTGTTCTGGAAG  777

seq1  AACTGGGTCAATGAGGACTTCTTTTCTACTTTCAGAACATGGCTTCTAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGTCAATGAGGACTTCTTTTCTACTTTCAGAACATGGCTTCTAAC  827

seq1  AGACATAACCAATTTTATACTACCAGAACCGTCTGAAGGTCCTCATTTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAACCAATTTTATACTACCAGAACCGTCTGAAGGTCCTCATTTCT  877

seq1  CCCAACCCCAACTGAGGCTGATTTTAACTCTGAGAAAATGATGTTGAAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCCCAACTGAGGCTGATTTTAACTCTGAGAAAATGATGTTGAAGA  927

seq1  ACAGTCCCGCTGAATGCTACACAGATAAGATAGTGTGAGTACTTTAGATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCCGCTGAATGCTACACAGATAAGATAGTGTGAGTACTTTAGATT  977

seq1  ATCAAGACCCTCAATGGGCTCCTGTAACAGGCCTGGTTTGCTCCACAGCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGACCCTCAATGGGCTCCTGTAACAGGCCTGGTTTGCTCCACAGCT  1027

seq1  ATGGGAATTC  1056
      ||||||||||
seq2  ATGGGAATTC  1037