BAC Information

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BAC

Clone NameB6Ng01-045P01
Chromosome14 (Build37)
Map Location 7,992,928 - 7,994,035
singlet/doubletsinglet
Overlap geneLOC100041791, LOC100042164
Upstream geneLOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456
Downstream geneLOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P01.bB6Ng01-045P01.g
ACCDH871248DH871249
length1,080812
definitionDH871248|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P01, 5' end.DH871249|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaactgctttattagacgtcatgtgcttttgagggggaatgttg
gttaggactgacatgcttaagagattttgttagcacccaaatctctagga
attgtggattaggtagatgtttcacaacaataaatataccagctgtgtca
attcatgtgacatacactccaatttcccagggttatcctgtctcacagag
gcaaatatctttctcctataggtttaattgtacaaaatatggacaatatt
ttctaacggtgtattccttgatacggggcatttttttcatatatatgtat
atatatatccatgagttttacaaaatctctggtttacaaccctatctttt
agaaagaaaactccctattcttttgaacatacggaatcatctacagggca
aatataaatggtaaacttgctgtcccttcttcaaaactttatcctgcaca
tgctcccgttctcaaatacaactagacaatttaagtgggcatcagagagt
aatggttatcctggactgtacattactgcattgtagcctcatagcaatta
cttctccaatatctgtcttcctgaattgctaagttgagaaatgagggtgt
tgctggttgtaacatcatactgtactcacagcaaatataatactcagaag
gtagggctgggagtgcaatgacctgagttgagatgaaacctcaattttaa
tgtgtctataaggtcaggatgctgtccctttggcattatcatctctggct
tctctgttcttatgctggctttcctgaacctgtgctataataccccccaa
ccacacagatttaagagtgaataatcatgtatatcttctttcagaaaaac
atctgaatttcactacctttcttgatccacacaatatcaatatgcacagc
tcaaaaatcatggggagatagtgatggctgcaaagatgagggcttttctt
acattagggacatatttttcatatgatttttctttctcttcactaggtgc
tgtgtgttgctgctaaaggtctgtccaacacatgggcttacctcatacag
gctcaatttacaagaaagatgttgtagaat
gaattctccttaagagggacggggtttcgttttctctctctcttgcttcg
ctctcttgcttctctctcttgcttctctctcttgcttctctctctcttgc
ttcttgctctcttgcttcttgcactctgctcctgaagatgtaacaataaa
gccttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtg
agaatgcgtctaataacaattggtgccgaattccgggacgagaaaaaaaa
ctcgggactggcgcaaggaggatccctcattccggaaccagaactgcgga
tcacgtttataaaggttcccgtaacacagactgttgagaaggattcaact
gccgaattcagaactcatcagctggggaacgacggtgataaaggttcccg
taaagcagactgttaagaaggattcaactgtatgaattcagaacttttca
gctggggaacgagagtaccagtgagtacagcttcacgaggtaagcctggc
cttgaactttctaacgaaattcaagacagtctatcagaagtaaagtggaa
tatgtttggccttgaattttttctggtgttaggagcccttttgttccttt
tcacatgtttatcaagtgattaagatagggctgaaaattctagagggaaa
tttcaggacaagctatcagaagtaaagcggggagagagagtaggaacaaa
gaggaaatatggtacacaaaataagtatacaggcctttccaagggtcttg
aacccgaggaaaagtaaaggtttaggtaggaatacctggagagaatatta
aaaaaaagagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7992928_7994035
seq2: B6Ng01-045P01.b_42_1121

seq1  GAATTCTAACTGCTTTATTAGACGTCATGTGCTTTTGAGGGGGAATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTGCTTTATTAGACGTCATGTGCTTTTGAGGGGGAATGTTG  50

seq1  GTTAGGACTGACATGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACTGACATGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGGA  100

seq1  ATTGTGGATTAGGTAGATGTTTCACAACAATAAATATACCAGCTGTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGATTAGGTAGATGTTTCACAACAATAAATATACCAGCTGTGTCA  150

seq1  ATTCATGTGACATACACTCCAATTTCCCAGGGTTATCCTGTCTCACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTGACATACACTCCAATTTCCCAGGGTTATCCTGTCTCACAGAG  200

seq1  GCAAATATCTTTCTCCTATAGGTTTAATTGTACAAAATATGGACAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATCTTTCTCCTATAGGTTTAATTGTACAAAATATGGACAATATT  250

seq1  TTCTAACGGTGTATTCCTTGATACGGGGCATTTTTTTCATATATATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACGGTGTATTCCTTGATACGGGGCATTTTTTTCATATATATGTAT  300

seq1  ATATATATCCATGAGTTTTACAAAATCTCTGGTTTACAACCCTATCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCCATGAGTTTTACAAAATCTCTGGTTTACAACCCTATCTTTT  350

seq1  AGAAAGAAAACTCCCTATTCTTTTGAACATACGGAATCATCTACAGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAACTCCCTATTCTTTTGAACATACGGAATCATCTACAGGGCA  400

seq1  AATATAAATGGTAAACTTGCTGTCCCTTCTTCAAAACTTTATCCTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAATGGTAAACTTGCTGTCCCTTCTTCAAAACTTTATCCTGCACA  450

seq1  TGCTCCCGTTCTCAAATACAACTAGACAATTTAAGTGGGCATCAGAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCGTTCTCAAATACAACTAGACAATTTAAGTGGGCATCAGAGAGT  500

seq1  AATGGTTATCCTGGACTGTACATTACTGCATTGTAGCCTCATAGCAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTATCCTGGACTGTACATTACTGCATTGTAGCCTCATAGCAATTA  550

seq1  CTTCTCCAATATCTGTCTTCCTGAATTGCTAAGTTGAGAAATGAGGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAATATCTGTCTTCCTGAATTGCTAAGTTGAGAAATGAGGGTGT  600

seq1  TGCTGGTTGTAACATCATACTGTACTCACAGCAAATATAATACTCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTTGTAACATCATACTGTACTCACAGCAAATATAATACTCAGAAG  650

seq1  GTAGGGCTGGGAGTGCAATGACCTGAGTTGAGATGAAACCTCAATTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGCTGGGAGTGCAATGACCTGAGTTGAGATGAAACCTCAATTTTAA  700

seq1  TGTGTCTATAAGGTCAGGATGCTGTCCCTTTGGCATTATCATCTCTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATAAGGTCAGGATGCTGTCCCTTTGGCATTATCATCTCTGGCT  750

seq1  TCTCTGTTCTTATGCTGGCTTTCCTGAACCTGTGCTATAATACCCCCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTCTTATGCTGGCTTTCCTGAACCTGTGCTATAATACCCCCCAA  800

seq1  CCACACAGATTTAAGAGTGAATAATCATGTATATCTTCTTTCAG-AAAAC  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCACACAGATTTAAGAGTGAATAATCATGTATATCTTCTTTCAGAAAAAC  850

seq1  ATCTGAATTTCACTACC-TTCTTGATCCACACAATATCAATATGCACAGC  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCTGAATTTCACTACCTTTCTTGATCCACACAATATCAATATGCACAGC  900

seq1  TCAAAAATCATGGGGAGATAGGTGATGGCTGCAAAGATGAGGGCTTTTTC  948
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TCAAAAATCATGGGGAGATA-GTGATGGCTGCAAAGATGAGGGC-TTTTC  948

seq1  TTACAATTAGGGCACATATTTTTTTCCAATATGATTTTTTCCTTTCCTCT  998
      |||| ||||||| ||||||||||     |||||||||||  |||| ||| 
seq2  TTAC-ATTAGGG-ACATATTTTT----CATATGATTTTT--CTTT-CTC-  988

seq1  TTCACTAAGGGTGGCTTGTGTGTTTGCTGGCCTAAAGGGTCCTGGTTCCA  1048
      |||||||  ||||   |||||| ||||||  |||||||   |||  ||||
seq2  TTCACTA--GGTG--CTGTGTG-TTGCTG--CTAAAGG--TCTG--TCCA  1027

seq1  ACAACATGGGGCTTACTCTATACAGGCTCAATTTTACCAAGAAAAGGATT  1098
      || |||| ||||||||   |||||||||||||||   |||||||  || |
seq2  AC-ACAT-GGGCTTACCTCATACAGGCTCAATTT--ACAAGAAA--GA-T  1070

seq1  GTTGTAGAAT  1108
      ||||||||||
seq2  GTTGTAGAAT  1080