BAC Information

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BAC

Clone NameB6Ng01-047H17
Chromosome14 (Build37)
Map Location 45,597,645 - 45,598,538
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr
Downstream genePtger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047H17.bB6Ng01-047H17.g
ACCDH872328DH872329
length8931,157
definitionDH872328|Mus musculus domesticus DNA, BAC clone: B6Ng01-047H17, 5' end.DH872329|Mus musculus domesticus DNA, BAC clone: B6Ng01-047H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgtgcctaacattagtttttgttcacattaaaaaaaaatag
aacctttgattcatttttatctttgagtggagtcttacaactagtcctct
ctgggactgcacatacagagcctctgtgtcccctttcaagtacagaaatt
ataaaatatctttgtctctgatttggtgggctccatagcaagaacatcca
gggccaggttctttattgattcactacatccttagcttgtccagcacaaa
gactgtagcactgtatcaggcatggcacattgtcctcaagctttccggtg
cccctgcctgccccgttcacagtccacattccagtgtgagcccccagctc
cagccaccagactgcccccatttcaaagcctccagttaccagcagacagg
acctcccagaactctggctcctattgctgacccaccctctacttcaaggt
gtgaaaactgccactcttttagccccttctctgtgaggttttggtcgtgt
atcccacatttgggacagatgaagctgctaagcctgctgccctccctcac
gcctgcctgcctgcctctgtacattatgatccttcagacccaaagctcac
cctgggtgccttttcctcttactttctcagttcagttctagacacctttt
caaatatactttcacgtaaaagaaataagtatctcaaatcttagaaaaag
taaagaattacaggataatgcccgtggacaagagaagctgtgattcatgc
tttctttgatttatttttgccagttattttttttttgtgtgtgtacatat
ttattagtcacaccacaagtagtttgcatcctccttttatcacttgaagt
ttgcttctttagtctttattgtgtgagtgtgtgtgtgtgtgtg
gaattctcacctgagtaatactgaatggttgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctgtaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcatataaccagaagatg
ttccaattagtaagaaagaaacatgctccactatgttcatagcaacctta
tttataatagccagaagctggaaagaacccagatgcccctcaacagagga
atggatacagaaaatgtggtacatttacgcaatggagtactactcagcta
ttaaaaagaatgaatttatgaaattcctaggcaaatggatggacctggag
ggcatcatcctgagtgaagtaacacaatcgcaaaagaacccatgtgatat
gtattcactgataactggatattagcccagaaaattagaatacccaagat
acaagatacaatttgcaaaacacatgaaattgaaaaagaacgaagaccaa
agtgtggacactttgccccttcttagaattgggaacaaaacacccatgga
aggagttacagagacaaagtttggagctgagacgaaacgatgggaccatc
tagagactgccatacccggggatccatcccataatcagcctccaaacttt
gacaccattgcatacaccagcaagattatgctgaaaggacccagatatag
ctgtctcttgtgagactatgctggggcctggcaaacacagaagtggatgc
tcacagtcagctattgaatggaacacaggctcccaatggaggagctagag
aaagtacccaagagctaaaggggtctgcaccctatagtgacacatatgga
ctaacagtacacccggagctcgtgtctctagctgcatatgtatcagagat
gcctagtgccatcatggtaagaaaagctcttgattgcaggtttatatgct
cagttacagggaacgcctgagtcagaagtgggagtggcgtgtaatatagt
gaagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45597645_45598538
seq2: B6Ng01-047H17.b_45_937 (reverse)

seq1  CACACACACACACACACTCACACAATAAAGACTAAAGAAGCAAAACTTCA  50
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACACACACACACACACTCACACAATAAAGACTAAAGAAGC-AAACTTCA  49

seq1  AGTGATAAAAGGAGGATGCAAACTACTTGTGGTGTGACTAATAAATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAAAAGGAGGATGCAAACTACTTGTGGTGTGACTAATAAATATGT  99

seq1  ACACACACAAAAAAAAAATAACTGGCAAAAATAAATCAAAGAAAGCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAAAAAAAAAATAACTGGCAAAAATAAATCAAAGAAAGCATGA  149

seq1  ATCACAGCTTCTCTTGTCCACGGGCATTATCCTGTAATTCTTTACTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCTTCTCTTGTCCACGGGCATTATCCTGTAATTCTTTACTTTTT  199

seq1  CTAAGATTTGAGATACTTATTTCTTTTACGTGAAAGTATATTTGAAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTTGAGATACTTATTTCTTTTACGTGAAAGTATATTTGAAAAGG  249

seq1  TGTCTAGAACTGAACTGAGAAAGTAAGAGGAAAAGGCACCCAGGGTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGAACTGAACTGAGAAAGTAAGAGGAAAAGGCACCCAGGGTGAGC  299

seq1  TTTGGGTCTGAAGGATCATAATGTACAGAGGCAGGCAGGCAGGCGTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCTGAAGGATCATAATGTACAGAGGCAGGCAGGCAGGCGTGAGG  349

seq1  GAGGGCAGCAGGCTTAGCAGCTTCATCTGTCCCAAATGTGGGATACACGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGCAGGCTTAGCAGCTTCATCTGTCCCAAATGTGGGATACACGA  399

seq1  CCAAAACCTCACAGAGAAGGGGCTAAAAGAGTGGCAGTTTTCACACCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCTCACAGAGAAGGGGCTAAAAGAGTGGCAGTTTTCACACCTTG  449

seq1  AAGTAGAGGGTGGGTCAGCAATAGGAGCCAGAGTTCTGGGAGGTCCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGGGTGGGTCAGCAATAGGAGCCAGAGTTCTGGGAGGTCCTGTC  499

seq1  TGCTGGTAACTGGAGGCTTTGAAATGGGGGCAGTCTGGTGGCTGGAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTAACTGGAGGCTTTGAAATGGGGGCAGTCTGGTGGCTGGAGCTG  549

seq1  GGGGCTCACACTGGAATGTGGACTGTGAACGGGGCAGGCAGGGGCACCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCACACTGGAATGTGGACTGTGAACGGGGCAGGCAGGGGCACCGG  599

seq1  AAAGCTTGAGGACAATGTGCCATGCCTGATACAGTGCTACAGTCTTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTGAGGACAATGTGCCATGCCTGATACAGTGCTACAGTCTTTGTG  649

seq1  CTGGACAAGCTAAGGATGTAGTGAATCAATAAAGAACCTGGCCCTGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACAAGCTAAGGATGTAGTGAATCAATAAAGAACCTGGCCCTGGATG  699

seq1  TTCTTGCTATGGAGCCCACCAAATCAGAGACAAAGATATTTTATAATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTATGGAGCCCACCAAATCAGAGACAAAGATATTTTATAATTTC  749

seq1  TGTACTTGAAAGGGGACACAGAGGCTCTGTATGTGCAGTCCCAGAGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTGAAAGGGGACACAGAGGCTCTGTATGTGCAGTCCCAGAGAGGA  799

seq1  CTAGTTGTAAGACTCCACTCAAAGATAAAAATGAATCAAAGGTTCTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGTAAGACTCCACTCAAAGATAAAAATGAATCAAAGGTTCTATTT  849

seq1  TTTTTTAATGTGAACAAAAACTAATGTTAGGCACAGAAGAATTC  894
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATGTGAACAAAAACTAATGTTAGGCACAGAAGAATTC  893