BAC Information

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BAC

Clone NameB6Ng01-048A01
Chromosome14 (Build37)4 (Build37)
Map Location 20,665,643 - 20,665,796114,796,823 - 114,797,623
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534
Downstream geneGng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048A01.bB6Ng01-048A01.g
ACCDH872705DH872706
length746794
definitionDH872705|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A01, 5' end.DH872706|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(20,665,643 - 20,665,796)(114,796,823 - 114,797,623)
sequence
gaattctctaggcttcttgtacatccatgggcattgttctttaggttaag
gaagttttcttctataattttgttgaatatatttactgactctttaagtt
gataatcttcattctcatctataccttttatccttaggtttggtctcctc
attgtgtcctagatttcctggatgttttgagttaggatctttttgcattt
tgtatttcctttgattgttgtgtccatgttttctatggaatcttctgcac
ctgagattctctcttccatctcttatattctcttggtgatgcttgcatct
atggctcctgattttgttcctaggatttctatttccagtgttgtcttcct
ttgtgatttctttatcatttctagttccaattttagatcctgggtggtct
tattctattccttcacctgtttggttgtgttttcctgtaattctttaagg
gatttttgtgtttcctctttaaggacttctacctggttacctgtgttttc
ctgtacttctttaagggagttattaatattcgtcttaaaatcctctacca
gcatcatgatatatgatttttaatctgaatcttgctttgctggtgtactg
gctagttttgtgtcaacttgacacatctggagttatcacagaaaaaggag
cttcagttgaggaaaggcctgcatgagatcccactgtaaggcattttctc
aattagtgatcaagggggaaaggccccatgtgggtggtgtcatctc
gaattcaggaaaggtttacctagacatccttactcactgggtacttgcat
tctgattagtttctagaaatcagctttgatttttcccaatccactatata
aactaatatagtgtttcacttaccagcatcactttcacagagtgggccat
cgtgtccacacatggttttaggatgtcctgatggaatgcaggagttagga
ggcagcggtgttggaaccacctgggcccatctaaattcaggagtcctcgt
ccttgaggaagaaaatgcacatagcctcatgcattttattgggttaggag
agatgaggaacacaggtggcctgatgtcaccgactcacgagcagacatga
agtagcagtgactatcaagaagctgacagatggggacggtcagctctgat
gctcacaccagagttaatgcatttagtgctgtgagaaagtgaaggctttg
aggcctgataagccttagcttcacagtgacggagtgtggtattctgtact
atattccatgaaggcacacatacaaaacacccaaccttaagaaaagactt
taagtttgaataacatcctttaaatttttttattaggagagatggctcag
cagttaaaagcactggctattcttccagaggtcctgagttcaattctcag
caaccacatggtggcttgtaagcatttgtaatgatgcctgatgccctctt
ctggtgtatcttaaatagcaacaatgtgtactcagacttaaataattatt
cttaaatttttaacattttcgtacaatgtattttaaaatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20665643_20665796
seq2: B6Ng01-048A01.b_632_785 (reverse)

seq1  GAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGATCACTAATTGAGA  50
      ||||||   ||||||||| |||||||||||||||||||||||||||||||
seq2  GAGATGACACCACCCACATGGGGCCTTTCCCCCTTGATCACTAATTGAGA  50

seq1  AAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAGCTCC  100
      |||||||||||||| |||||||||| |||| |||||||||||||||||||
seq2  AAATGCCTTACAGTGGGATCTCATGCAGGCCTTTCCTCAACTGAAGCTCC  100

seq1  TTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGT  150
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTTCTGTGATAACTCCAGATGTGTCAAGTTGACACAAAACTAGCCAGT  150

seq1  ACAC  154
      ||||
seq2  ACAC  154

seq1: chr4_114796823_114797623
seq2: B6Ng01-048A01.g_67_860

seq1  GAATTCAGGAAAGGTTTACCTAGACATCCTTACTCACTGGGTACTTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAAGGTTTACCTAGACATCCTTACTCACTGGGTACTTGCAT  50

seq1  TCTGATTAGTTTCTAGAAATCAGCTTTGATTTTTCCCAATCCACTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTAGTTTCTAGAAATCAGCTTTGATTTTTCCCAATCCACTATATA  100

seq1  AACTAATATAGTGTTTCACTTACCAGCATCACTTTCACAGAGTGGGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATATAGTGTTTCACTTACCAGCATCACTTTCACAGAGTGGGCCAT  150

seq1  CGTGTCCACACATGGTTTTAGGATGTCCTGATGGAATGCAGGAGTTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCCACACATGGTTTTAGGATGTCCTGATGGAATGCAGGAGTTAGGA  200

seq1  GGCAGCGGTGTTGGAACCACCTGGGCCCATCTAAATTCAGGAGTCCTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCGGTGTTGGAACCACCTGGGCCCATCTAAATTCAGGAGTCCTCGT  250

seq1  CCTTGAGGAAGAAAATGCACATAGCCTCATGCATTTTATTGGGTTAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGGAAGAAAATGCACATAGCCTCATGCATTTTATTGGGTTAGGAG  300

seq1  AGATGAGGAACACAGGTGGCCTGATGTCACCGACTCACGAGCAGACATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGAACACAGGTGGCCTGATGTCACCGACTCACGAGCAGACATGA  350

seq1  AGTAGCAGTGACTATCAAGAAGCTGACAGATGGGGACGGTCAGCTCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGTGACTATCAAGAAGCTGACAGATGGGGACGGTCAGCTCTGAT  400

seq1  GCTCACACCAGAGTTAATGCATTTAGTGCTGTGAGAAAGTGAAGGCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACACCAGAGTTAATGCATTTAGTGCTGTGAGAAAGTGAAGGCTTTG  450

seq1  AGGCCTGATAAGCCTTAGCTTCACAGTGACGGAGTGTGGTATTCTGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGATAAGCCTTAGCTTCACAGTGACGGAGTGTGGTATTCTGTACT  500

seq1  ATATTCCATGAAGGCACACATACAAAACACCCAACCTTAAGAAAAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATGAAGGCACACATACAAAACACCCAACCTTAAGAAAAGACTT  550

seq1  TAAGTTTGAATAACATCCTTTAAATTTTTTTATTAGGAGAGATGGCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGAATAACATCCTTTAAATTTTTTTATTAGGAGAGATGGCTCAG  600

seq1  CAGTTAAAAGCACTGGCTATTCTTCCAGAGGTCCTGAGTTCAATTCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAAAGCACTGGCTATTCTTCCAGAGGTCCTGAGTTCAATTCTCAG  650

seq1  CAACCACATGGTGGCTTGTAAGCATTTGTAATGATGTCTGATGCCCTCTT  700
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAACCACATGGTGGCTTGTAAGCATTTGTAATGATGCCTGATGCCCTCTT  700

seq1  CTGGTGTATCTTAAAATAGCAACAATGTGTACTCAGACATAAAATAAATA  750
      |||||||||||| ||||||||||||||||||||||||| ||||   ||| 
seq2  CTGGTGTATCTT-AAATAGCAACAATGTGTACTCAGACTTAAA--TAATT  747

seq1  ATTCTTAAAATTTTTTAACATTTTTCATACAATGTATTTTTATAATATTT  800
      |||||||||  ||||||||| ||||| ||||||||| ||||| |||||||
seq2  ATTCTTAAA--TTTTTAACA-TTTTCGTACAATGTA-TTTTAAAATATTT  793

seq1  T  801
      |
seq2  T  794