BAC Information

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BAC

Clone NameB6Ng01-048A13
Chromosome14 (Build37)
Map Location 82,024,681 - 82,025,811
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048A13.bB6Ng01-048A13.g
ACCDH872719DH872720
length1,2601,108
definitionDH872719|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A13, 5' end.DH872720|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattggcacaaggggagatttcctaaacagaacttcaatggttca
ggctttaataacaattgataaatgggactccatgaaactggaaagcttct
gtaaggcaaaggacatagtcaataggacaaatcagcaaactacagattgg
gagaaaaatcttcactaacgcacatctgatagaggcctaatatgcaaaat
atataaagaactcaagaaactaaccacaaaatcaacaacaacaacaacaa
caacaacaacaacaacaacaagaaacaatacttccaaatacaggggtata
gaactaaacagtgaatttacaacagaggaattttgaatgtcttagaaaca
cctaaagaaatgtccaaagtccttagagatcataaaaatacaactcaaaa
taacactgagattctcccttatacaaattgagaatggctaagagcaaaac
ctcaggtgacatcacatgagcacacgttggtgaggatgtagagaaagaga
aacacttctctattgctggtgggattgcaaactggtacaaccactctgga
aatcaatctgaagattcctcagaaaattggaaagagatctgcctgaagac
ccagtaataccattcttgggaaagtacccaaaatatgccccaccatgcca
cagggacatgtgttacacttcgttcatagcagccttgtttgtgatagcca
gaagctggaaacaacccagatgtcccagaagaatggatacagaaaatatg
gttcatatacacaatggaatactaatcaactatgaaaaatgaagacattc
tgagttttgcagacaaatagatagacctgcaaaatatcatcttcagtgag
gtaaatcacacccaaaggacatgcatggtatgtactcactaataagtgga
tattagcaaaagaaaaaaagtgcacaaatacccacatacagtccacaaat
tcaaatagtcaacaaactgaaggccttagtgaggatgcctcagtcccact
tgggaagaagaagaagcaaccacagtgaaagggagcgaggggcctgggag
gtaaaggaataggtgtgcaaaagcgaaatgattgggtattcattggggaa
aagactgaaattctgaggccagaagaagcaaatgcaacttggagtgaaag
ttgggacctcaaagtctagaaccttgggtggagactcgaaccgaaggact
ttgaaagtcaatgggatgactgactccctcgcagagagtatagagaagtc
tcgcctacat
gaattctgagcataatcatgagggagtgaaatgcaaaggacaggacattt
atttgttccagaatcaaagatgttacccaaccttgttctgaatcattgtt
tatatgattaatgtaaagaaagaaaggcagatgggactgtttagtaatgt
ggaaattttatgaagagattatgttaagatgttttataaaatcaaggtaa
tgacgtgaactcccacagacatagaagttgggaacacacacacagagagg
gagagagagagagagagagagagagagagatatcgtgaaatcgaaagaag
ctaaaagctaaagtgcatattcagttgagaatcaacgaataatagttatt
taataaattatgaacataaaattgcaaatatcacaaaagaagtttaaagc
aaattcataaacaacttgaagatcaaaatcagagtaattaatttcaccag
agagagaaaacaaagaccctgcataccagaatcatgtgttgacagattgt
agacttgttagaaatccaacacacacaatgaaaaactgaggaaagcagac
aacgtgctatggcaaacggatatctgaactggaactgcatgtgcaaatag
tctcaatggatgaaaactcgatatgatattgaggctttattctaatatgc
ggtaatcttatctctgcctcccaaacactgacattaccactgacataaca
ggtattcagtaaaactactactactaccactgcttcaagtaattattcca
acaaatattaattgggcatccacttgctgtctaaaactacttcatgggta
ttaaagcaacaatattgtacaaatgaatatatatatatatagtttattat
ggacatttgacattcttaacaatgttgaaatggaaacagaaaataaacaa
atcagagaataaagtgtacacttgtctatagtgattgatacatataacta
tcaaacagtatgagatatatgaatggcaataatatttacacaaaaatctt
tgttaacatgctaaatttgtatctacaaaatagaacaatggccaagatta
tttgttatcttccaatactcattgtggttcacaaaatctccattcttgca
atgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82024681_82025811
seq2: B6Ng01-048A13.g_68_1175

seq1  GAATTCTGAGCATAATCATGAGGGAGTGAAATGCAAAGGACAGGACATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGCATAATCATGAGGGAGTGAAATGCAAAGGACAGGACATTT  50

seq1  ATTTGTTCCAGAATCAAAGATGTTACCCAACCTTGTTCTGAATCATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCCAGAATCAAAGATGTTACCCAACCTTGTTCTGAATCATTGTT  100

seq1  TATATGATTAATGTAAAGAAAGAAAGGCAGATGGGACTGTTTAGTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTAATGTAAAGAAAGAAAGGCAGATGGGACTGTTTAGTAATGT  150

seq1  GGAAATTTTATGAAGAGATTATGTTAAGATGTTTTATAAAATCAAGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTTATGAAGAGATTATGTTAAGATGTTTTATAAAATCAAGGTAA  200

seq1  TGACGTGAACTCCCACAGACATAGAAGTTGGGAACACACACACAGAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTGAACTCCCACAGACATAGAAGTTGGGAACACACACACAGAGAGG  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATCGTGAAATCGAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATCGTGAAATCGAAAGAAG  300

seq1  CTAAAAGCTAAAGTGCATATTCAGTTGAGAATCAACGAATAATAGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGCTAAAGTGCATATTCAGTTGAGAATCAACGAATAATAGTTATT  350

seq1  TAATAAATTATGAACATAAAATTGCAAATATCACAAAAGAAGTTTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATTATGAACATAAAATTGCAAATATCACAAAAGAAGTTTAAAGC  400

seq1  AAATTCATAAACAACTTGAAGATCAAAATCAGAGTAATTAATTTCACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATAAACAACTTGAAGATCAAAATCAGAGTAATTAATTTCACCAG  450

seq1  AGAGAGAAAACAAAGACCCTGCATACCAGAATCATGTGTTGACAGATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAACAAAGACCCTGCATACCAGAATCATGTGTTGACAGATTGT  500

seq1  AGACTTGTTAGAAATCCAACACACACAATGAAAAACTGAGGAAAGCAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTTAGAAATCCAACACACACAATGAAAAACTGAGGAAAGCAGAC  550

seq1  AACGTGCTATGGCAAACGGATATCTGAACTGGAACTGCATGTGCAAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCTATGGCAAACGGATATCTGAACTGGAACTGCATGTGCAAATAG  600

seq1  TCTCAATGGATGAAAACTCGATATGATATTGAGGCTTTATTCTAATATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATGGATGAAAACTCGATATGATATTGAGGCTTTATTCTAATATGC  650

seq1  GGTAATCTTATCTCTGCCTCCCAAACACTGACATTACCACTGACATAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATCTTATCTCTGCCTCCCAAACACTGACATTACCACTGACATAACA  700

seq1  GGTATTCAGTAAAACTACTACTACTACCACTGCTTCAAGTAATTATTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCAGTAAAACTACTACTACTACCACTGCTTCAAGTAATTATTCCA  750

seq1  ACAAATATTAATTGGGCATCCACTTGCTGTCTAAAACTACTTCATGGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATTAATTGGGCATCCACTTGCTGTCTAAAACTACTTCATGGGTA  800

seq1  TTAAAGCAACAATATTGTACAAATGAATATATATATATATAGTTTATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAACAATATTGTACAAATGAATATATATATATATAGTTTATTAT  850

seq1  GGACATTTGACATTCTTAACAATGTTGAAATGGAAACAGAAAATAAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTTGACATTCTTAACAATGTTGAAATGGAAACAGAAAATAAACAA  900

seq1  ATCAGAGAATAAAGTGTACACTTGTCTATAGTGATTGATACATATAACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAATAAAGTGTACACTTGTCTATAGTGATTGATACATATAACTA  950

seq1  TCAAAACAGGTAATGAAGAATAATATGAATGGCAAATAATATTTAACACA  1000
      || ||||||   ||| |||   ||||||||||| |||||||||| |||| 
seq2  TC-AAACAG--TATG-AGA--TATATGAATGGC-AATAATATTT-ACAC-  991

seq1  AAAAATCTTTGTTAAACAATGCTAAAATCTGTATCCTACAAAATAG-ACA  1049
      |||||||||||||||   ||||| |||| ||||| ||||||||||| |||
seq2  AAAAATCTTTGTTAA--CATGCT-AAATTTGTAT-CTACAAAATAGAACA  1037

seq1  ATGGCCAAAGTATATTTGTTATCTTTCTCATTACTCATTGTTGTTCCACA  1099
      |||||| |||  |||||||||||||   || |||||||||| ||| ||||
seq2  ATGGCC-AAGATTATTTGTTATCTT--CCAATACTCATTGTGGTT-CACA  1083

seq1  AGATCTTCCATGTCTATTGCAAAATTGTTTTT  1131
      | ||| |||||   | ||||||   |||||||
seq2  AAATC-TCCAT---TCTTGCAA---TGTTTTT  1108