BAC Information

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BAC

Clone NameB6Ng01-050O02
Chromosome14 (Build37)
Map Location 16,640,368 - 16,641,433
singlet/doubletsinglet
Overlap genenone
Upstream geneNek10, Lrrc3b
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050O02.bB6Ng01-050O02.g
ACCDH874697DH874698
length1,0531,174
definitionDH874697|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O02, 5' end.DH874698|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaggggtaaaaatccatgatggcagagtgaaggcagcaagtg
gtacatatggtggctggagctgtttacatcttgaatcatgagtaggaagt
aaagaaaacaagctcaagtattggcaggactcttgctttcttaaatccct
cctctacatgcatgtgccttccatccaggcttcacctcctaaatattcca
acagcgctctcaactgagggttgactgttcaaacatctgagcctgtggag
gacattctcattcaaaccaccacaaggaagcatgacctgtagagtgtctg
tcctcttggaccacatgtgtcttggtgtctataaggcaattggaagggtg
aacacttgcctctttagaagtctcccaaacagtttctgaagactggcata
actatctcaacaaagcccttacctccttacaaaccagtgttggtccttgc
agcaacagatagtttaattccattctcccgaaaaaattagtgcgactttt
atgatttttaacatgatcaaaacaatgaggtagaaatgacatttatgaat
ttctgaggtcaacgcatatgaagcatttcagttggcatgtagtttcttgg
catgctagctctggaaaagccagacaccatgtaataagatgtacagcttc
attgaaggaagcatgctttgagaagaccaaactgaaaatattttaggcta
gacagaagctgggcagtccacttctgttccaactgttctagtgagaacac
tagacacttgcaggacagaatatgctcagcacaagtactagcttccatgt
agcttcagtaatacccatgaccccagtatagccacctagctgagccaggc
aaccatagaacctaaaaagagataatttaatagtacagtttcatatattt
ttataaagtaaaaaatatttttagaattatagtatatacatttttcatgt
tcaataagtatttttcagttgttttccaaatgtctttaactgtagtttct
tgcgtgactgtgtgaaatttttatgtttgaacctttctttacactattat
gtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaagttggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggataaagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggccctggaaggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaagactccttggaaggagttacagagacaaagttttgagctgagatg
aaaggatggtccatgtagagacttccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
agacccagatgtagctgtctcttgtgagactatgctggggcctagcaaat
acagaagtggatgctcacagtcagcttatgatggatcacagggcttccca
atggaggagctagaagaaagtacccaagaatctaaggggattgcaaccct
ataggtggaacaacattatgactaatcagaaccccggagctctggactct
agcttgcatataatcaaaagatggctattggccttacttgagaagaggtc
ctatggatttgccacttttttgtcctgtacaggggatcctcagatgcaaa
tatggggagagagtgcgtggtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16640368_16641433
seq2: B6Ng01-050O02.b_46_1098

seq1  GAATTCCAGAGGGGTAAAAATCCATGATGGCAGAGTGAAGGCAGCAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGGGTAAAAATCCATGATGGCAGAGTGAAGGCAGCAAGTG  50

seq1  GTACATATGGTGGCTGGAGCTGTTTACATCTTGAATCATGAGTAGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATATGGTGGCTGGAGCTGTTTACATCTTGAATCATGAGTAGGAAGT  100

seq1  AAAGAAAACAAGCTCAAGTATTGGCAGGACTCTTGCTTTCTTAAATCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACAAGCTCAAGTATTGGCAGGACTCTTGCTTTCTTAAATCCCT  150

seq1  CCTCTACATGCATGTGCCTTCCATCCAGGCTTCACCTCCTAAATATTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACATGCATGTGCCTTCCATCCAGGCTTCACCTCCTAAATATTCCA  200

seq1  ACAGCGCTCTCAACTGAGGGTTGACTGTTCAAACATCTGAGCCTGTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGCTCTCAACTGAGGGTTGACTGTTCAAACATCTGAGCCTGTGGAG  250

seq1  GACATTCTCATTCAAACCACCACAAGGAAGCATGACCTGTAGAGTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTCATTCAAACCACCACAAGGAAGCATGACCTGTAGAGTGTCTG  300

seq1  TCCTCTTGGACCACATGTGTCTTGGTGTCTATAAGGCAATTGGAAGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGGACCACATGTGTCTTGGTGTCTATAAGGCAATTGGAAGGGTG  350

seq1  AACACTTGCCTCTTTAGAAGTCTCCCAAACAGTTTCTGAAGACTGGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGCCTCTTTAGAAGTCTCCCAAACAGTTTCTGAAGACTGGCATA  400

seq1  ACTATCTCAACAAAGCCCTTACCTCCTTACAAACCAGTGTTGGTCCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTCAACAAAGCCCTTACCTCCTTACAAACCAGTGTTGGTCCTTGC  450

seq1  AGCAACAGATAGTTTAATTCCATTCTCCCGAAAAAATTAGTGCGACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGATAGTTTAATTCCATTCTCCCGAAAAAATTAGTGCGACTTTT  500

seq1  ATGATTTTTAACATGATCAAAACAATGAGGTAGAAATGACATTTATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTTAACATGATCAAAACAATGAGGTAGAAATGACATTTATGAAT  550

seq1  TTCTGAGGTCAACGCATATGAAGCATTTCAGTTGGCATGTAGTTTCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGTCAACGCATATGAAGCATTTCAGTTGGCATGTAGTTTCTTGG  600

seq1  CATGCTAGCTCTGGAAAAGCCAGACACCATGTAATAAGATGTACAGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAGCTCTGGAAAAGCCAGACACCATGTAATAAGATGTACAGCTTC  650

seq1  ATTGAAGGAAGCATGCTTTGAGAAGACCAAACTGAAAATATTTTAGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGGAAGCATGCTTTGAGAAGACCAAACTGAAAATATTTTAGGCTA  700

seq1  GACAGAAGCTGGGCAGTCCACTTCTGTTCCAACTGTTCTAGTGAGAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGCTGGGCAGTCCACTTCTGTTCCAACTGTTCTAGTGAGAACAC  750

seq1  TAGACACTTGCAGGACAGAATATGCTCAGCACAAGTACTAGCTTCCATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTTGCAGGACAGAATATGCTCAGCACAAGTACTAGCTTCCATGT  800

seq1  AGCTTCAGTAATACCCATGACCCCAGTATAGCCACCTAGCTGAGCCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAGTAATACCCATGACCCCAGTATAGCCACCTAGCTGAGCCAGGC  850

seq1  AACCATAGAACCTAAAAAAGAGATAATTTTAATAGTACAGTTTCATATAT  900
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  AACCATAGAACCT-AAAAAGAGATAA-TTTAATAGTACAGTTTCATATAT  898

seq1  TTTTATAAAGTAAAAAATATTTTTAGAATTATAGTATATACAATTTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  TTTTATAAAGTAAAAAATATTTTTAGAATTATAGTATATACA--TTTTTC  946

seq1  ATGTTCAATAAGTATTTCTCAGTTGTTTTTCCAAATGTCTTTAACTGTTG  1000
      ||||||||||||||||| ||||||| ||||||||||||||||||||| | 
seq2  ATGTTCAATAAGTATTTTTCAGTTG-TTTTCCAAATGTCTTTAACTG-TA  994

seq1  GTCTCTTGCCGTGACTGTGTGAAAATTTTTATGTTTTTGAACCCTTTCTT  1050
      || ||||| |||||||||||| |||||||||||  |||||| |||||| |
seq2  GTTTCTTG-CGTGACTGTGTG-AAATTTTTATG--TTTGAA-CCTTTC-T  1038

seq1  TTACACTAATTATGTT  1066
      ||||||| ||||||||
seq2  TTACACT-ATTATGTT  1053