BAC Information

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BAC

Clone NameB6Ng01-050O05
Chromosome14 (Build37)
Map Location 66,936,713 - 66,937,730
singlet/doubletsinglet
Overlap genenone
Upstream geneFbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35
Downstream geneStmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050O05.bB6Ng01-050O05.g
ACCDH874701DH874702
length1,0071,200
definitionDH874701|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O05, 5' end.DH874702|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaggtggtttagagtaaaaatgccaagtgctctatcttaag
ccctgtacaggtttcttacatgccagttaattcttcagaaggtggcagat
gctatattttgaaatcatggtttctcagtaacgaatcccagaaacaagag
agagattgagaactacatggtcagaagcacaccaaaaaaaaaaaaaaaaa
aaaaaaaagtctccctgcagtttaacaaggacatatatttatggtctggg
agtgtaggtctgtaattgcagttacttgaagctgaggcaggaggatcata
atcgtgggatcatctccaagtaaagagagcatcgtggatatagtgcagtg
gtgagagtcgatgccttgtggggacggagccccacatggaagccctactg
tcacaagaaagttcacaacatttcaggaaccagggaagccatcaggttgt
aataaaaataagggtccagaactaaacatgcaggcatgcagcctatgaac
ccacaagcctctcaaatgtgtgtgtgtgtgcgattagattatgttcacat
gattgtaactccaaaggtacagaatgtgctagaagagtctcactgcacac
tgaccctcccaggcgggccatagtatcagtttttcttctcagtcttctga
gaggctttgtccgtggtgcggactctattgatgaagtgacttctgtatgc
acataacatgcaccataacttaaaagcagactgtcctgccctgtatctta
accaacctgactgggagcagaagcctcaaaatgagaatactgttaaataa
gtgaagatgttccttcactgtagggaaggcgtgtcctgtatggttgcatg
gcaccctcacttggtaaatgccccactttttgcttaacattgtgttctta
gagttttaaagaaaaagaatacgctaagtctttaaacccagaccttacca
aatgggttcattcagtcttcacaaggagtctggtatccggaactagatag
gaattgg
gaattcaatttccaagagccatgtaaaaaagctaaatgtggtggccaatg
gttttaatcccagacctgaggtgacagagtcagatggactcatgggaatc
tgaggtcaatcagcctatagtggtggtaaattaatctgatctaaactccc
tggcagatacacttgtgtacacacttcttgtcacttgcccaaatgttttg
aatccatgagtaaaacacacacacatgcagccttaattttaatatgccct
aagcagcttgatggctgggccactctttctaccctagacccaattatgga
agtgggcactggtgccatttccctgactcttatatagctagatgctttct
ctcctgcagctttcaaatctgttaattctgcttcctcatcatggtgattc
tcaaaccttcttcctgtggtcccttgcccagaaaatctaaagtcccgcct
ctgtcttcctacccagctattgactgccaactttatttaccaattagaac
caactgggggctgggaccctaagcgtctggatgtgcagattcctgtgtga
tttggggaaccaaattaacatgaatagcattagaactaacccataacatc
tcacccttttcatccataaaaaggccttttctctcagatatatattgaac
gtagctataaggtatgatatacaataataatgtccagtccatcaatcttg
ctgtataggtactctatatctaccctaacttagagtttacatttctatac
ctgaatcatggtctgattttaacttgcattagcacctgaaagcatccttt
taaatctacatcatctcctcaatgctaacaacttgatatgagactataac
cagtcttcaaccctgtctgaatctagatgagtaatattacctgaatatat
aggagcacaaatcatactccaatgtaacaatcataaggcagctgactacc
tggacagtcctctattcctcaatgttgcagcatctctgcagccttctggc
cttacctctgacggaccttaggtgagcagacttgaagactagcttaccta
atttgccgagctagcgtgtgatattccccatctaacctcctggagatttt
ttatctgagacattaggcaatctggcaggtcctgctaactggaggtctag
gttaggctactgagatcgagtccgtctcaaatgtaacacagggtagagct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66936713_66937730
seq2: B6Ng01-050O05.b_50_1056

seq1  GAATTCATTGAGGTGGTTTAGAGTAAAAATGCCAAGTGCTCTATCTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGGTGGTTTAGAGTAAAAATGCCAAGTGCTCTATCTTAAG  50

seq1  CCCTGTACAGGTTTCTTACATGCCAGTTAATTCTTCAGAAGGTGGCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTACAGGTTTCTTACATGCCAGTTAATTCTTCAGAAGGTGGCAGAT  100

seq1  GCTATATTTTGAAATCATGGTTTCTCAGTAACGAATCCCAGAAACAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTTTGAAATCATGGTTTCTCAGTAACGAATCCCAGAAACAAGAG  150

seq1  AGAGATTGAGAACTACATGGTCAGAAGCACACCAAAAAAAAAAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGAGAACTACATGGTCAGAAGCACACCAAAAAAAAAAAAAAAAA  200

seq1  AAAAAAAAGTCTCCCTGCAGTTTAACAAGGACATATATTTATGGTCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGTCTCCCTGCAGTTTAACAAGGACATATATTTATGGTCTGGG  250

seq1  AGTGTAGGTCTGTAATTGCAGTTACTTGAAGCTGAGGCAGGAGGATCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGGTCTGTAATTGCAGTTACTTGAAGCTGAGGCAGGAGGATCATA  300

seq1  ATCGTGGGATCATCTCCAAGTAAAGAGAGCATCGTGGATATAGTGCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGGGATCATCTCCAAGTAAAGAGAGCATCGTGGATATAGTGCAGTG  350

seq1  GTGAGAGTCGATGCCTTGTGGGGACGGAGCCCCACATGGAAGCCCTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGTCGATGCCTTGTGGGGACGGAGCCCCACATGGAAGCCCTACTG  400

seq1  TCACAAGAAAGTTCACAACATTTCAGGAACCAGGGAAGCCATCAGGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAAAGTTCACAACATTTCAGGAACCAGGGAAGCCATCAGGTTGT  450

seq1  AATAAAAATAAGGGTCCAGAACTAAACATGCAGGCATGCAGCCTATGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATAAGGGTCCAGAACTAAACATGCAGGCATGCAGCCTATGAAC  500

seq1  CCACAAGCCTCTCAAATGTGTGTGTGTGTGCGATTAGATTATGTTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGCCTCTCAAATGTGTGTGTGTGTGCGATTAGATTATGTTCACAT  550

seq1  GATTGTAACTCCAAAGGTACAGAATGTGCTAGAAGAGTCTCACTGCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAACTCCAAAGGTACAGAATGTGCTAGAAGAGTCTCACTGCACAC  600

seq1  TGACCCTCCCAGGCGGGCCATAGTATCAG-TTTTCTTCTCAGTCTTCTGA  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGACCCTCCCAGGCGGGCCATAGTATCAGTTTTTCTTCTCAGTCTTCTGA  650

seq1  GAGGCTTTGTCCGTGGTGCGTACTCTATTGATG-AGTGACTTCTGTATGC  698
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  GAGGCTTTGTCCGTGGTGCGGACTCTATTGATGAAGTGACTTCTGTATGC  700

seq1  ACATAACATGCACCATAACTTAAAAGCAGACTGTCCTGCCCTGTATC-TA  747
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACATAACATGCACCATAACTTAAAAGCAGACTGTCCTGCCCTGTATCTTA  750

seq1  ACCAACCTGACTGGGAGCAGGAAGCTCAAAATGAAGAATACTGTTAAAAT  797
      |||||||||||||||||||| |  ||||||||| ||||||||||| ||||
seq2  ACCAACCTGACTGGGAGCAGAAGCCTCAAAATG-AGAATACTGTT-AAAT  798

seq1  AAGTGAAGATGTTCCTTCACTGTAGGGAAGGCGTGTCCTGTATGGTTGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGATGTTCCTTCACTGTAGGGAAGGCGTGTCCTGTATGGTTGCA  848

seq1  TGCAACACTCACTTGGTAGATGCCACACTTTTTGCTTAAACATTGTG-TC  896
      ||  || ||||||||||| ||||| |||||||||||| ||||||||| ||
seq2  TGGCACCCTCACTTGGTAAATGCCCCACTTTTTGCTT-AACATTGTGTTC  897

seq1  TTAGAGTTTTAAAAGAAAAAGAAAACGCTAAAGCCTTTTAAACCCAAGAC  946
      |||||||||| |||||||||||| |||||||  |  ||||||||| ||||
seq2  TTAGAGTTTT-AAAGAAAAAGAATACGCTAAGTC--TTTAAACCC-AGAC  943

seq1  CTTACGAAATGTGTTTCAATTCCAGTCTTCACAAAGGAGTCTGGTAGCCC  996
      ||||| ||||| | ||||  | |||||||||| |||||||||||||  ||
seq2  CTTACCAAATG-GGTTCA--TTCAGTCTTCAC-AAGGAGTCTGGTA-TCC  988

seq1  GGAGACTAGGATAGGGAATTGG  1018
      ||| |||| |||| ||||||||
seq2  GGA-ACTA-GATA-GGAATTGG  1007