BAC Information

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BAC

Clone NameB6Ng01-051J02
Chromosome14 (Build37)
Map Location 4,145,418 - 4,146,494
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790
Downstream geneLOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051J02.bB6Ng01-051J02.g
ACCDH875169DH875170
length1,0771,018
definitionDH875169|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J02, 5' end.DH875170|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctttttaatagctgactagttcttcattgtacaaatgtacc
gtattttatgtatccattcctctgttgatggacatcttggttctttccag
ctactggctatcataattaaggctgctatgaacataatggagctagtgca
gattcaaggcaatttatatactacatagcctataaatcatcattgttacc
tgacttgaaagggacacagcaagtcagactcatctgtcatttggggacaa
taagtcttgagagtaacttttaggatttttcaagtttaagacaagcttaa
gtagaggaccaaaagaggaacgtggctgttataagtctgcagtcagttga
cccctagaaaggttgttatatagttaagtgctatatgcctctacaaatcc
tagtgtaagtggtcagattaaccctgcaattgaaaacattaccaaaccag
gaatgtgctatgctgagcactcacagagagttatgaggagctgccctagg
ctccttttacagcaagtaaaaatagacaaagagatcaaatatcctaatac
cacaagatgataaaactgacaagtgtagattgcactgagtatcagctagt
ttagattcttgtgcatctacagattgtcatgcagcatctgcatcagggac
aatacataaggagatggctgctcagtggcatgacaaacaaccaagaagag
ccatagcctctacccctctgatctggatgatgagactttaaaagtcttta
gtttgtcaccatctctcccaggactgctggcatcatttcttgcatatgtt
tactctagcacttgtctaccttaggtacaaacacagtggacagtcccaca
ggcccacagaggaggctccactaccacgcactcactctatcacgaccagg
attctaggatcccaggatccagaatcccaggtgtttagtcacacaagaat
cttagattctcacaggcacttgactcccaggactgcgaaccacccagaat
ctcaggtcaaggaatccaagaatttttcacctgtatccttagagctttta
tgatcaggaacaggatgccagctggga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaacccggagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatctggagaaagaggaacactcctccattgatggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggatgatccagcaatacctctcctgggc
atatatccagaatatgccccaactggtaagaaggacacatgctccactat
gttcatagcaatagccagaagctggaaagaacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatctacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggatggacct
ggagggcatcatcctgagtgaggtaacacattcacaaaggaactcacaca
atatgtactcactgataagtggatattagcccaaaacctaggatacccaa
gatataagatacaatttcctaaacacatgaaactcaagaaaaaatgaaga
ctgaagtgtggacactatgcccctccttagaagtgggaacaaaacaccct
tggaaggagttacagagacaaagtttggagctgagatgaaaggatggacc
atgtagagactgccatatccagggatccaccccataatcagcattcaaac
gctgacaccattgcatacactagcaagatttatcgaaaggacccagatgt
agctgtctcttggtgagactatgccgggcctagcaaacacagaaattgga
tgctcacattcagtctaatgggatggatcacagggctccaatggaagtag
cagagaaagtaccaaagaacctaagggatctgcaaccctatggtgaacaa
cattatgaactaccatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4145418_4146494
seq2: B6Ng01-051J02.b_46_1122

seq1  GAATTCATTCTTTTTAATAGCTGACTAGTTCTTCATTGTACAAATGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTTTTAATAGCTGACTAGTTCTTCATTGTACAAATGTACC  50

seq1  GTATTTTATGTATCCATTCCTCTGTTGATGGACATCTTGGTTCTTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTATGTATCCATTCCTCTGTTGATGGACATCTTGGTTCTTTCCAG  100

seq1  CTACTGGCTATCATAATTAAGGCTGCTATGAACATAATGGAGCTAGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGCTATCATAATTAAGGCTGCTATGAACATAATGGAGCTAGTGCA  150

seq1  GATTCAAGGCAATTTATATACTACATAGCCTATAAATCATCATTGTTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAGGCAATTTATATACTACATAGCCTATAAATCATCATTGTTACC  200

seq1  TGACTTGAAAGGGACACAGCAAGTCAGACTCATCTGTCATTTGGGGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGAAAGGGACACAGCAAGTCAGACTCATCTGTCATTTGGGGACAA  250

seq1  TAAGTCTTGAGAGTAACTTTTAGGATTTTTCAAGTTTAAGACAAGCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTGAGAGTAACTTTTAGGATTTTTCAAGTTTAAGACAAGCTTAA  300

seq1  GTAGAGGACCAAAAGAGGAACGTGGCTGTTATAAGTCTGCAGTCAGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGACCAAAAGAGGAACGTGGCTGTTATAAGTCTGCAGTCAGTTGA  350

seq1  CCCCTAGAAAGGTTGTTATATAGTTAAGTGCTATATGCCTCTACAAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGAAAGGTTGTTATATAGTTAAGTGCTATATGCCTCTACAAATCC  400

seq1  TAGTGTAAGTGGTCAGATTAACCCTGCAATTGAAAACATTACCAAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAAGTGGTCAGATTAACCCTGCAATTGAAAACATTACCAAACCAG  450

seq1  GAATGTGCTATGCTGAGCACTCACAGAGAGTTATGAGGAGCTGCCCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGCTATGCTGAGCACTCACAGAGAGTTATGAGGAGCTGCCCTAGG  500

seq1  CTCCTTTTACAGCAAGTAAAAATAGACAAAGAGATCAAATATCCTAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTACAGCAAGTAAAAATAGACAAAGAGATCAAATATCCTAATAC  550

seq1  CACAAGATGATAAAACTGACAAGTGTAGATTGCACTGAGTATCAGCTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGATGATAAAACTGACAAGTGTAGATTGCACTGAGTATCAGCTAGT  600

seq1  TTAGATTCTTGTGCATCTACAGATTGTCATGCAGCATCTGCATCAGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTCTTGTGCATCTACAGATTGTCATGCAGCATCTGCATCAGGGAC  650

seq1  AATACATAAGGAGATGGCTGCTCAGTGGCATGACAAACAACCAAGAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAAGGAGATGGCTGCTCAGTGGCATGACAAACAACCAAGAAGAG  700

seq1  CCATAGCCTCTACCCCTCTGATCTGGATGATGAGAC-TTAAAAGTC-TTA  748
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  CCATAGCCTCTACCCCTCTGATCTGGATGATGAGACTTTAAAAGTCTTTA  750

seq1  GTTTGTCACCATCTCTCCCAGGACTGCTGGCATCATTTCTTGCATATGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCACCATCTCTCCCAGGACTGCTGGCATCATTTCTTGCATATGTT  800

seq1  TACTCTAGCACTTGTCTACCTTAGGTACAAACACAGTGGACAGTCCCACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTAGCACTTGTCTACCTTAGGTACAAACACAGTGGACAGTCCCACA  850

seq1  -GCCCACAGAGGAGGCTCCACTACCACGCACTCACTCTATCACGACCAGG  897
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACAGAGGAGGCTCCACTACCACGCACTCACTCTATCACGACCAGG  900

seq1  ATCTTAGGATCCCAGGATCCCAGAATCCCAGGTG-TTAGTCACACAAGAA  946
      ||  |||||||||||||| ||||||||||||||| |||||||||||||||
seq2  ATTCTAGGATCCCAGGAT-CCAGAATCCCAGGTGTTTAGTCACACAAGAA  949

seq1  TCTTAGAGTCTCACAGGCAACTTGACTCCCAGGAACTGCGACACACCCAG  996
      ||||||| |||||||||| |||||||||||||| |||||||  |||||||
seq2  TCTTAGATTCTCACAGGC-ACTTGACTCCCAGG-ACTGCGAACCACCCAG  997

seq1  AATCTCAGGGTCACAGGATCCCAGAATTTTACACCTGTATCCTTAGAGCT  1046
      ||||||| |||||  | |||| |||||||| |||||||||||||||||||
seq2  AATCTCA-GGTCAAGGAATCCAAGAATTTTTCACCTGTATCCTTAGAGCT  1046

seq1  TTAATGATCAAGGACAAGGATG-CAGCTGGGA  1077
      || |||||| ||||  |||||| |||||||||
seq2  TTTATGATC-AGGAACAGGATGCCAGCTGGGA  1077