BAC Information

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BAC

Clone NameB6Ng01-051J24
Chromosome14 (Build37)
Map Location 13,324,816 - 13,439,733
singlet/doubletdoublet
Overlap geneCadps
Upstream geneLOC100041996, Ptprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2
Downstream geneEG432822, LOC100042022, LOC100042026, EG328354, Synpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051J24.bB6Ng01-051J24.g
ACCDH875210DH875211
length987922
definitionDH875210|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J24, 5' end.DH875211|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,438,745 - 13,439,733)(13,324,816 - 13,325,341)
sequence
gaattcagagcttctaaaaggaaccagaacactgaggatgctgcataagt
tcagacccctgtactcatttcccatgggacagcagacttaagtcatggtc
atcctgcctctcctcgctgctgagtggtagctactttaatatttaatatc
gattttttgataagtcattgacacagctactcagttcatatatgctgaat
gcttactaagtgttacacattatgtggatgttaagattttttagtgggat
gtcaaaactgtgtgaccctgattcatagcccagaaggaaagacagacact
aagcaaatacaactcataaatgatttgttgattttaagtatgctatctta
gtctattcaggctgcttaaaaaaaaaaaaccagaatttgtttcctatagt
tccatactactgggagatcaaggttaaggcagcggcaaagcctcaactcc
ttctttgatctctagacagtcatcgttccacaaggtccatgcatggaagg
aagagcaaatacattagctgtggccttgctggaaggcaatcatcttgttc
ataagggctgtatccttgaggtctcattataaatgccatcatactgaagg
gttagggtttatacagggtttgaaaggaaaacaaacagctggccatttca
ataacagatacccataaagtagaaagtagtggtaacccgacaaggagacg
tgttgaagttgaatgtggaagaagacaaaaggctgagagtgaccaaggag
caagagaaaagggggactagcccttaggaaacaccactggctaaagccag
agcctggcccagcccacgggcatcactcagaagctctaagagaaagatct
gcacctattgcagtgaagttgctgactcataagaacaaacactcttagct
aactagcggtcaggaaattactaaaggaagaggagactcccagtgtatta
gtttcttttttttctctctctcttctcttctctctct
gaattcagacaactgaacattttctcagatttttttttcttttttttatt
aggtattttcctcatttacatttccaacgctatcccaaaagtcccccata
ctctccccccccaattccctacccacccactcccactttttggccctggc
attcccctgtactggggcatataaagtttgcaagtccaaagggcctctct
ttccagtgatggccgactaggccatcttttgatacatatgcagctagagt
caagagctccggggtactggttagttcataatgttgttccacctataggg
ttgcagatccctttacctccttgggtactttctctagctcctccattggg
ggccctgtaatccatccaatagctgactgtgagcatctacttctgtgttt
gctaggccccggcgtagtctcacaggtctcacaagagacagtggagaaag
agggacactcctccattgttggtgggattgcaagcttgtagaaccactct
ggaaatcagtctggcagttcctcagaaaattggacatggtactaccggag
gatcctgcaatacctctcctgggcatatatccagaagatgttccaactag
taagaaagaaacatgctccactatgttcatagcatccttatttttaatag
ccagaagctggaaagaacccagatgcccctcaacagaggaatggatacaa
aaaatgtggtacatttacacaatggagtactactcagctattaaaaagaa
tgaatttatgacattcctaggcaaatggttggacttggagggcattatcc
tgagtgaggtaacccaatcacaaaataactcaaatgatatgtactcactg
ataagtggctagtagcccagaaacttagattacccagataaaagttacat
ttgcaaacacatgaaactcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13438745_13439733
seq2: B6Ng01-051J24.b_45_1031 (reverse)

seq1  AGAGAAGAGAAGAGAAGAGA---AGAAAAAAAAGAAACTAATACACTTGG  47
      |||| |||||||||||||||   ||||||||||||||||||||||| |||
seq2  AGAG-AGAGAAGAGAAGAGAGAGAGAAAAAAAAGAAACTAATACAC-TGG  48

seq1  GAGTCTCCTCTTCCTTTTAGTAATTTCCCTGACCGCTAGTTAGCTAAGAG  97
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  GAGTCTCCTCTTCC-TTTAGTAATTT-CCTGACCGCTAGTTAGCTAAGAG  96

seq1  TGTTTTGTTCTTATGAGTCAGCAACTTCACTGCAATAGGTGCAGATCTTT  147
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TTTGTTCTTATGAGTCAGCAACTTCACTGCAATAGGTGCAGATCTTT  145

seq1  CTCTTAGAGCTTCTGAGTGATGCCCGTGGGCTGGGCCAGGCTCTGGCCTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCTTAGAGCTTCTGAGTGATGCCCGTGGGCTGGGCCAGGCTCTGGCTTT  195

seq1  AGCCAGTGGTGTTTCCTAAGGGCTAGTCCCCCTTTTCTCTTGCTCCTTGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGGTGTTTCCTAAGGGCTAGTCCCCCTTTTCTCTTGCTCCTTGG  245

seq1  TCACTCTCAGCCTTTTGTCTTCTTCCACATTCAACTTCAACACGTCTCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCAGCCTTTTGTCTTCTTCCACATTCAACTTCAACACGTCTCCT  295

seq1  TGTCGGGTTACCACTACTTTCTACTTTATGGGTATCTGTTATTGAAATGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGGTTACCACTACTTTCTACTTTATGGGTATCTGTTATTGAAATGG  345

seq1  CCAGCTGTTTGTTTTCCTTTCAAACCCTGTATAAACCCTAACCCTTCAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGTTTGTTTTCCTTTCAAACCCTGTATAAACCCTAACCCTTCAGT  395

seq1  ATGATGGCATTTATAATGAGACCTCAAGGATACAGCCCTTATGAACAAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCATTTATAATGAGACCTCAAGGATACAGCCCTTATGAACAAGA  445

seq1  TGATTGCCTTCCAGCAAGGCCACAGCTAATGTATTTGCTCTTCCTTCCAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCCTTCCAGCAAGGCCACAGCTAATGTATTTGCTCTTCCTTCCAT  495

seq1  GCATGGACCTTGTGGAACGATGACTGTCTAGAGATCAAAGAAGGAGTTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGACCTTGTGGAACGATGACTGTCTAGAGATCAAAGAAGGAGTTGA  545

seq1  GGCTTTGCCGCTGCCTTAACCTTGATCTCCCAGTAGTATGGAACTATAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCCGCTGCCTTAACCTTGATCTCCCAGTAGTATGGAACTATAGG  595

seq1  AAACAAATTCTGGTTTTTTTTTTTTAAGCAGCCTGAATAGACTAAGATAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTCTGGTTTTTTTTTTTTAAGCAGCCTGAATAGACTAAGATAG  645

seq1  CATACTTAAAATCAACAAATCATTTATGAGTTGTATTTGCTTAGTGTCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTAAAATCAACAAATCATTTATGAGTTGTATTTGCTTAGTGTCTG  695

seq1  TCTTTCCTTCTGGGCTATGAATCAGGGTCACACAGTTTTGACATCCCACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTCTGGGCTATGAATCAGGGTCACACAGTTTTGACATCCCACT  745

seq1  AAAAAATCTTAACATCCACATAATGTGTAACACTTAGTAAGCATTCAGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCTTAACATCCACATAATGTGTAACACTTAGTAAGCATTCAGCA  795

seq1  TATATGAACTGAGTAGCTGTGTCAATGACTTATCAAAAAATCGATATTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAACTGAGTAGCTGTGTCAATGACTTATCAAAAAATCGATATTAA  845

seq1  ATATTAAAGTAGCTACCACTCAGCAGCGAGGAGAGGCAGGATGACCATGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAGTAGCTACCACTCAGCAGCGAGGAGAGGCAGGATGACCATGA  895

seq1  CTTAAGTCTGCTGTCCCATGGGAAATGAGTACAGGGGTCTGAACTTATGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTCTGCTGTCCCATGGGAAATGAGTACAGGGGTCTGAACTTATGC  945

seq1  AGCATCCTCAGTGTTCTGGTTCCTTTTAGAAGCTCTGAATTC  989
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTCAGTGTTCTGGTTCCTTTTAGAAGCTCTGAATTC  987

seq1: chr14_13324816_13325341
seq2: B6Ng01-051J24.g_64_589

seq1  GAATTCAGACAACTGAACATTTTCTCAGATTTTTTTTTCTTTTTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACAACTGAACATTTTCTCAGATTTTTTTTTCTTTTTTTTATT  50

seq1  AGGTATTTTCCTCATTTACATTTCCAACGCTATCCCAAAAGTCCCCCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTTCCTCATTTACATTTCCAACGCTATCCCAAAAGTCCCCCATA  100

seq1  CTCTCCCCCCCCAATTCCCTACCCACCCACTCCCACTTTTTGGCCCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCCCCAATTCCCTACCCACCCACTCCCACTTTTTGGCCCTGGC  150

seq1  ATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAAAGGGCCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAAAGGGCCTCTCT  200

seq1  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGT  250

seq1  CAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGG  300

seq1  TTGCAGATCCCTTTACCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATCCCTTTACCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGG  350

seq1  GGCCCTGTAATCCATCCAATAGCTGACTGTGAGCATCTACTTCTGTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGTAATCCATCCAATAGCTGACTGTGAGCATCTACTTCTGTGTTT  400

seq1  GCTAGGCCCCGGCGTAGTCTCACAGGTCTCACAAGAGACAGTGGAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCCCCGGCGTAGTCTCACAGGTCTCACAAGAGACAGTGGAGAAAG  450

seq1  AGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTAGAACCACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTAGAACCACTCT  500

seq1  GGAAATCAGTCTGGCAGTTCCTCAGA  526
      ||||||||||||||||||||||||||
seq2  GGAAATCAGTCTGGCAGTTCCTCAGA  526