BAC Information

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BAC

Clone NameB6Ng01-052P18
Chromosome14 (Build37)
Map Location 31,397,470 - 31,531,599
singlet/doubletdoublet
Overlap genePrkcd, EG665466, Rft1
Upstream geneCacna2d3, EG665431, Selk, Actr8, Il17rb, Chdh, Cacna1d, LOC665399, Dcp1a, Tkt
Downstream geneSfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052P18.bB6Ng01-052P18.g
ACCDH876169DH876170
length4101,156
definitionDH876169|Mus musculus domesticus DNA, BAC clone: B6Ng01-052P18, 5' end.DH876170|Mus musculus domesticus DNA, BAC clone: B6Ng01-052P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,531,184 - 31,531,599)(31,397,470 - 31,398,643)
sequence
actagacttttaaaaaaatcaattttcattcaattgtctttgcaaattct
aagcttaacaaaattaattcatctgacacctttaactcttaacttgttca
aaaattcataatttcttccttcaaacctactctctacaaatctgtatccc
aaaatgggaaatgatataataatataacgactataaacataaagaccccc
agaaaccacaatcctaacacaccaaaaactgctcagttaaaaatgtcctc
ctgaagccgggcagtggtgtggtggcgcatgcctttaatcccagcactcg
ggagacagaggcaggcggatttctgagttcgaggccagcctggtctacag
agtgagttccaggacagccagggctatatagagaaatcctgtcttggggg
ggggggggag
gaattctctggggtgagtatgtcttggttcacgtgtcccctgggaaagtc
aagtccctcaggccagggcaagcctcaggcctaggaacagaggcattccc
cacagactaaaagcaggtgctggcctctcagtgaaagaggacatgaatgt
ctcagggctgaatctaggagggggttgcaaaggaggttaaaagggctgaa
attacatctctgctgttttatttctccatctgggacgatcattctctcca
agttttttcgtatctgaaagtttgcttaacaattttgtcagaaagagcca
ccatctcccctaatgttgggccccttccctctacccgtatggaaggcccg
cccacacagggctcactctctcctgaccgactcagaaaggtcacagacac
acacacaatacattctgctgcagtcttttgttttgaagtttgctgattgc
ttgtctgggggaaatcttccctttccctttaacccctgaggcgctgatct
cctccagctctgcgcaagccttggagcaggcctttgaattggtagagcac
tggcatctgaggctggagcacgttgccttctgtctccaggcaagtcatta
ggccaatgctgcccgagctgagccccccgtgtgagtgtgctcaccacctc
cgaccaaaaccgcgaggctcacaatttcccaccacagtgcggtctcctac
cactccaggcactggtggagtcactctgttcatttaaacctgtcagctcc
tcttccagccagggctggcgctgtcactctgtggagacaggggacagcca
ccaggactgataacattcagggaccacacattcacagtcttaccctccac
atgcacagcccccaggactgtctgctgctgcagcttctctgcccgggctg
ctttcctgacctcagcttctcgccgactcgtctttttctgtttcaaaact
tggagatggcacatcacaatgagaacacagaacaacgtcacagtgtagga
gccgtcataaaggacctggcagatcaagagttggacgtcttttaaacact
gttaaatcatgacctctttgaacatgacaagctataactataaataggca
cccttaaccctcacacgggtctgcgtggagtgcttgtatttttaacctta
taaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_31531184_31531599
seq2: B6Ng01-052P18.b_43_458 (reverse)

seq1  CTCCCCCCCCCCCCCAAGACAGGATTTCTCTATATAGCCCTGGCTGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCCCCAAGACAGGATTTCTCTATATAGCCCTGGCTGTCCT  50

seq1  GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGC  100

seq1  CTCTGTCTCCCGAGTGCTGGGATTAAAGGCATGCGCCACCACACCACTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCCGAGTGCTGGGATTAAAGGCATGCGCCACCACACCACTGC  150

seq1  CCGGCTTCAGGAGGACATTTTTAACTGAGCAGTTTTTGGTGTGTTAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTTCAGGAGGACATTTTTAACTGAGCAGTTTTTGGTGTGTTAGGAT  200

seq1  TGTGGTTTCTGGGGGTCTTTATGTTTATAGTCGTTATATTATTATATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTCTGGGGGTCTTTATGTTTATAGTCGTTATATTATTATATCAT  250

seq1  TTCCCATTTTGGGATACAGATTTGTAGAGAGTAGGTTTGAAGGAAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTTTGGGATACAGATTTGTAGAGAGTAGGTTTGAAGGAAGAAAT  300

seq1  TATGAATTTTTGAACAAGTTAAGAGTTAAAGGTGTCAGATGAATTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTTTTGAACAAGTTAAGAGTTAAAGGTGTCAGATGAATTAATTT  350

seq1  TGTTAAGCTTAGAATTTGCAAAGACAATTGAATGAAAATTGATTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGCTTAGAATTTGCAAAGACAATTGAATGAAAATTGATTTTTTTA  400

seq1  AAAGTCTAGTGAATTC  416
      ||||||||||||||||
seq2  AAAGTCTAGTGAATTC  416

seq1: chr14_31397470_31398643
seq2: B6Ng01-052P18.g_70_1225

seq1  GAATTCTCTGGGGTGAGTATGTCTTGGTTCACGTGTCCCCTGGGAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGGGTGAGTATGTCTTGGTTCACGTGTCCCCTGGGAAAGTC  50

seq1  AAGTCCCTCAGGCCAGGGCAAGCCTCAGGCCTAGGAACAGAGGCATTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTCAGGCCAGGGCAAGCCTCAGGCCTAGGAACAGAGGCATTCCC  100

seq1  CACAGACTAAAAGCAGGTGCTGGCCTCTCAGTGAAAGAGGACATGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTAAAAGCAGGTGCTGGCCTCTCAGTGAAAGAGGACATGAATGT  150

seq1  CTCAGGGCTGAATCTAGGAGGGGGTTGCAAAGGAGGTTAAAAGGGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGCTGAATCTAGGAGGGGGTTGCAAAGGAGGTTAAAAGGGCTGAA  200

seq1  ATTACATCTCTGCTGTTTTATTTCTCCATCTGGGACGATCATTCTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATCTCTGCTGTTTTATTTCTCCATCTGGGACGATCATTCTCTCCA  250

seq1  AGTTTTTTCGTATCTGAAAGTTTGCTTAACAATTTTGTCAGAAAGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTCGTATCTGAAAGTTTGCTTAACAATTTTGTCAGAAAGAGCCA  300

seq1  CCATCTCCCCTAATGTTGGGCCCCTTCCCTCTACCCGTATGGAAGGCCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCCCTAATGTTGGGCCCCTTCCCTCTACCCGTATGGAAGGCCCG  350

seq1  CCCACACAGGGCTCACTCTCTCCTGACCGACTCAGAAAGGTCACAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACAGGGCTCACTCTCTCCTGACCGACTCAGAAAGGTCACAGACAC  400

seq1  ACACACAATACATTCTGCTGCAGTCTTTTGTTTTGAAGTTTGCTGATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAATACATTCTGCTGCAGTCTTTTGTTTTGAAGTTTGCTGATTGC  450

seq1  TTGTCTGGGGGAAATCTTCCCTTTCCCTTTAACCCCTGAGGCGCTGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGGGGAAATCTTCCCTTTCCCTTTAACCCCTGAGGCGCTGATCT  500

seq1  CCTCCAGCTCTGCGCAAGCCTTGGAGCAGGCCTTTGAATTGGTAGAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCTCTGCGCAAGCCTTGGAGCAGGCCTTTGAATTGGTAGAGCAC  550

seq1  TGGCATCTGAGGCTGGAGCACGTTGCCTTCTGTCTCCAGGCAAGTCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTGAGGCTGGAGCACGTTGCCTTCTGTCTCCAGGCAAGTCATTA  600

seq1  GGCCAATGCTGCCCGAGCTGAGCCCCCCGTGTGAGTGTGCTCACCACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGCTGCCCGAGCTGAGCCCCCCGTGTGAGTGTGCTCACCACCTC  650

seq1  CGACCAAAACCGCGAGGCTCACAA-TTCCCACCACAGTGCGGTCTCCTAC  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CGACCAAAACCGCGAGGCTCACAATTTCCCACCACAGTGCGGTCTCCTAC  700

seq1  CACTCCAGGCACTGGTGGAGTCACTCTGTTCATTTAAACCTGTCAGCTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAGGCACTGGTGGAGTCACTCTGTTCATTTAAACCTGTCAGCTCC  750

seq1  TC-TCCAGCCAGGGCTGGCGCTGTCACTCTGTGGAGACAGGGGACAGCCA  798
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGCCAGGGCTGGCGCTGTCACTCTGTGGAGACAGGGGACAGCCA  800

seq1  CCAGGACTGATAACATTCAGGGACCACACATTCACAGTCTTACCCTCCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTGATAACATTCAGGGACCACACATTCACAGTCTTACCCTCCAC  850

seq1  ATGCACAGCCCCCAGGACTGTCTGCTGCTGCAGCTTCTCTGCCCGGGCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGCCCCCAGGACTGTCTGCTGCTGCAGCTTCTCTGCCCGGGCTG  900

seq1  CTTTCCTGACCTCAGCTTCTCGCCGACTCGTTCTTTTTCATGTTTCAAAA  948
      |||||||||||||||||||||||||||||| |||||||| |||||| |||
seq2  CTTTCCTGACCTCAGCTTCTCGCCGACTCG-TCTTTTTC-TGTTTC-AAA  947

seq1  ACTTGGAGATGGCACATCCACAAAGAGAAACACAGAACAAACGCACAGTG  998
      ||||||||||||||||| ||||| ||| ||||||||||||   |||||||
seq2  ACTTGGAGATGGCACAT-CACAATGAG-AACACAGAACAACGTCACAGTG  995

seq1  TAAGGAGCCGTCATAAAAGGACCTGGCAGGTCAAGAGTTGGAACGTTCTT  1048
      | |||||||||||| |||||||||||||| ||||||||||| ||| ||||
seq2  T-AGGAGCCGTCAT-AAAGGACCTGGCAGATCAAGAGTTGG-ACG-TCTT  1041

seq1  TTAAAAGCACTGTTAAATCATGACCTCTTTTGAACATGGACAAGCATAAA  1098
      |||||  |||||||||||||||||||| ||||||||| |||||||   | 
seq2  TTAAA--CACTGTTAAATCATGACCTC-TTTGAACAT-GACAAGC--TAT  1085

seq1  AACTA-AAATAGGCATCCTTAAACCCACCACTGGGTTCTGCGGTGAGTTC  1147
      ||||| ||||||||| ||||||  ||  |||  || ||||||  ||||  
seq2  AACTATAAATAGGCACCCTTAA--CCCTCACACGGGTCTGCGTGGAGT--  1131

seq1  GTTTGTATTTTTTAACCTTTATAAGGC  1174
      | ||||| ||||||||| |||||||||
seq2  GCTTGTA-TTTTTAACC-TTATAAGGC  1156