BAC Information

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BAC

Clone NameB6Ng01-053J03
Chromosome14 (Build37)
Map Location 22,315,591 - 22,450,807
singlet/doubletdoublet
Overlap geneMyst4
Upstream geneZmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053J03.bB6Ng01-053J03.g
ACCDH876579DH876580
length1,0731,057
definitionDH876579|Mus musculus domesticus DNA, BAC clone: B6Ng01-053J03, 5' end.DH876580|Mus musculus domesticus DNA, BAC clone: B6Ng01-053J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,315,591 - 22,316,666)(22,449,746 - 22,450,807)
sequence
gaattcctcacagcctcggtcctggataagaaagttcaaggtctttatgt
ctgctgcttccttacccactttcccccaaatcagtgtgagtgtacctgga
actttttttttgttttttgagacagggtttctctgtgtagccctggctgt
catggaactcactttgtagaccaggctggcctcttcttatctgacttgtc
ttagagcaagtaaacaagccccaaagatcaaaactcctgtagttcccttt
ggctccttccccacctactctgccctttttttgttttgttgttgttaaag
ctcaaggacacatgggtcacacctcggaatcattccagtcctaattctgg
ctaagaaaatcatggaattatttctgttgagggggaagaattcagcctag
gctaacagttctcaaattcaaaaaactgagaatttcaatacaagtcttga
gctaacagttgtagatctggcaacccattccagagctactgaatcagaag
gtgggttgggccaaggatgctatctgggaagcatcccagatcattccgat
tccagtgatctgtggactgcactaaacagcacaaatagctgtcaatagtt
ctggcagaggctagctgttttccggtggtggtgaacaggtgagataagat
gctggtttatgatggtgcagaatgtgtgctatgcttggttttcaattctc
gctattcctaggttaacttaattgagctatttcactcagcagagacttga
gataccacagataagaaagagtttaagagggagcagtgagtatctatctg
gctgcgtctctgttatcctctcagtcctacttatctgaagaggcagattt
atcaaaggacaagtaaccctccaaggggaatagcagtgggaaaactgttc
ccctttcttgccacacccgttggataattttgttaggaaaagacattaca
ctatattctgctttccggttttctacatcaacaagatttagacaattgtc
atcttatttttgctgtctccctttgctctcagggtggctggggctggaac
catgaagcattaagcaagttctt
gaattccgatgctaagattgaatacacactgtgctatctatacacaaacc
atccaagcacacagtcaacagttaggaatattagggttcaaaaagaccat
gtttttgtttatacttgcttacctcgaatactgaaaggtctttccttcgg
taaatctcattggccggaggatgaaaccatccacacttctttgagtgtct
tagcaaaatatttttactcttcatatatttaagacagaattcacacaggt
aaagctttggtaatctgtcaaagtttaaaaatcagaaagtctattagagt
gactatactgttcaagagagaaaagctaaacattgttcaatgttttctag
acataaaatggctataaaatcttttgaaaacattttcaaaaagggaaaaa
gaagccaggtatagtggcatatagcctcaaccccaacagtcggtctcaga
ggcaggagggaagggtctctgtgagctttaggccagcttggtctacacag
ctaattcctgaccagccagagctacacagtaagagcctgtctcaacacaa
cacaatacaacacaacaaaacaaaacaaaacggcagggggcggggtgtgg
agaatccagtaataaagaaatataaagaccttaaaatattttaaataaag
cttataataatgtgttcttattttactctatgacctaccatcaggttttt
caggcctgaaaaatcaacaattcagaatgctattcttttagtgtgaccaa
gtatatttttaaaaattcagatttaatgctgtatttttaaatattcttaa
tgcagactgctgtacctagagtaatatttttatttataagtgaatttatt
atctttaaatgatatggatatctatgaggcagaggtcctaaaagggggct
tttatttcctgcctctgatgaggagctatatatgtaatagtctaaagaag
tggacgcaagtccgacagtcaaagcctcccatttgtttcctacaattcca
ctgctgctttaatcctaaattacagaagtgttggggttttgtctgcgtgt
tatattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22315591_22316666
seq2: B6Ng01-053J03.b_44_1116

seq1  GAATTCCTCACAGCCTCGGTCCTGGATAAGAAAGTTCAAGGTCTTTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCACAGCCTCGGTCCTGGATAAGAAAGTTCAAGGTCTTTATGT  50

seq1  CTGCTGCTTCCTTACCCACTTTCCCCCAAATCAGTGTGAGTGTACCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTTCCTTACCCACTTTCCCCCAAATCAGTGTGAGTGTACCTGGA  100

seq1  ACTTTTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  150

seq1  CATGGAACTCACTTTGTAGACCAGGCTGGCCTCTTCTTATCTGACTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACTCACTTTGTAGACCAGGCTGGCCTCTTCTTATCTGACTTGTC  200

seq1  TTAGAGCAAGTAAACAAGCCCCAAAGATCAAAACTCCTGTAGTTCCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCAAGTAAACAAGCCCCAAAGATCAAAACTCCTGTAGTTCCCTTT  250

seq1  GGCTCCTTCCCCACCTACTCTGCCCTTTTTTTGTTTTGTTGTTGTTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTCCCCACCTACTCTGCCCTTTTTTTGTTTTGTTGTTGTTAAAG  300

seq1  CTCAAGGACACATGGGTCACACCTCGGAATCATTCCAGTCCTAATTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGACACATGGGTCACACCTCGGAATCATTCCAGTCCTAATTCTGG  350

seq1  CTAAGAAAATCATGGAATTATTTCTGTTGAGGGGGAAGAATTCAGCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAATCATGGAATTATTTCTGTTGAGGGGGAAGAATTCAGCCTAG  400

seq1  GCTAACAGTTCTCAAATTCAAAAAACTGAGAATTTCAATACAAGTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGTTCTCAAATTCAAAAAACTGAGAATTTCAATACAAGTCTTGA  450

seq1  GCTAACAGTTGTAGATCTGGCAACCCATTCCAGAGCTACTGAATCAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGTTGTAGATCTGGCAACCCATTCCAGAGCTACTGAATCAGAAG  500

seq1  GTGGGTTGGGCCAAGGATGCTATCTGGGAAGCATCCCAGATCATTCCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTGGGCCAAGGATGCTATCTGGGAAGCATCCCAGATCATTCCGAT  550

seq1  TCCAGTGATCTGTGGACTGCACTAAACAGCACAAATAGCTGTCAATAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGATCTGTGGACTGCACTAAACAGCACAAATAGCTGTCAATAGTT  600

seq1  CTGGCAGAGGCTAGCTGTTTTCCGGTGGTGGTGAACAGGTGAGATAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGGCTAGCTGTTTTCCGGTGGTGGTGAACAGGTGAGATAAGAT  650

seq1  GCTGGTTTATGATGGTGCAGAATGTGTGCTATGCTTGGTTTTCAATTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTATGATGGTGCAGAATGTGTGCTATGCTTGGTTTTCAATTCTC  700

seq1  GCTATTCCTAGGTTAACTTAATTGAGCTATTTCACTCAGCAGAGACTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCCTAGGTTAACTTAATTGAGCTATTTCACTCAGCAGAGACTTGA  750

seq1  GATACCACAGATAAGAAAGAGGTTTAAGAGGGAGCAGTGAGTATCTATCT  800
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATACCACAGATAAGAAAGA-GTTTAAGAGGGAGCAGTGAGTATCTATCT  799

seq1  GGCTGCGTCTCTGTTATCCTCTCAGTCCTACTTATCTGAAGAGGCAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCGTCTCTGTTATCCTCTCAGTCCTACTTATCTGAAGAGGCAGATT  849

seq1  TATCAAAGGACAAGTAACCCTCC-AGGGGAATAGCAGTGGGAAAACTGTT  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATCAAAGGACAAGTAACCCTCCAAGGGGAATAGCAGTGGGAAAACTGTT  899

seq1  CCCCTTTCTTGCCACACCCGTTGGATAATTTTGTTAGGAAAAGACATTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTCTTGCCACACCCGTTGGATAATTTTGTTAGGAAAAGACATTAC  949

seq1  ACTATATTTCTGCTTTCCGAGTTTTCTACATCAACAAAGATTTAGACAAA  999
      |||||| |||||||||||| ||||||||||||||| ||||||||||||| 
seq2  ACTATA-TTCTGCTTTCCG-GTTTTCTACATCAAC-AAGATTTAGACAAT  996

seq1  TGTCAATCTATTTTTTTGCTGTCTCCC-TTGCTCTCAGGGTGGCTGGGGC  1048
      |||| |||| | ||||||||||||||| ||||||||||||||||||||||
seq2  TGTC-ATCT-TATTTTTGCTGTCTCCCTTTGCTCTCAGGGTGGCTGGGGC  1044

seq1  TTGAACCATG-AGCATTAAGCAAGTTCTT  1076
      | |||||||| ||||||||||||||||||
seq2  TGGAACCATGAAGCATTAAGCAAGTTCTT  1073

seq1: chr14_22449746_22450807
seq2: B6Ng01-053J03.g_65_1121 (reverse)

seq1  GAATATAACACTGCAGACAAAAACCCAAAACACTTCT-TAATTTAAGAAT  49
      ||||||||||| |||||||||| |||  ||||||||| |||||| || ||
seq2  GAATATAACAC-GCAGACAAAACCCC--AACACTTCTGTAATTT-AGGAT  46

seq1  TAAAGCAGCAGTGGAATTGGTAGGAAACAAATGTGAGCTTTTGACTGTCG  99
      |||||||||||||||||| |||||||||||||| |||  |||||||||||
seq2  TAAAGCAGCAGTGGAATT-GTAGGAAACAAATGGGAGGCTTTGACTGTCG  95

seq1  GACTTGCGTCCACTACTTTAGACTATTACATTATATAGCTTCCTCATCCA  149
      |||||||||||||| ||||||||||||||| |||||||| ||||||| ||
seq2  GACTTGCGTCCACTTCTTTAGACTATTACA-TATATAGC-TCCTCAT-CA  142

seq1  GAGGCA-GAAATAAAAGCCACCTTTTAGGACCTCTGCCTCATAGATATCC  198
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGGCAGGAAATAAAAGCCCCCTTTTAGGACCTCTGCCTCATAGATATCC  192

seq1  ATATCATTTTAAAGATAATAAATTCACTTATAAAT-AAAATATTACTCTA  247
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  ATATCA-TTTAAAGATAATAAATTCACTTATAAATAAAAATATTACTCTA  241

seq1  GGTACAGCAGTCTGCATTAAGAATATTTAAAAATACAGCATTAAATCTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGCAGTCTGCATTAAGAATATTTAAAAATACAGCATTAAATCTGA  291

seq1  ATTTTTAAAAATATACTTGGTCACACT-AAAGAATAGCATTCTGAATTGT  346
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTTTTAAAAATATACTTGGTCACACTAAAAGAATAGCATTCTGAATTGT  341

seq1  TGATTTTTCAGGCCTGAAAAACCTGATGGTAGGTCATAGAGTAAAATAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTCAGGCCTGAAAAACCTGATGGTAGGTCATAGAGTAAAATAAG  391

seq1  AACACATTATTATAAGCTTTATTTAAAATATTTTAAGGTCTTTATATTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTATTATAAGCTTTATTTAAAATATTTTAAGGTCTTTATATTTC  441

seq1  TTTATTACTGGATTCTCCACACCCCGCCCCCTGCCGTTTTGTTTTGTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACTGGATTCTCCACACCCCGCCCCCTGCCGTTTTGTTTTGTTTT  491

seq1  GTTGTGTTGTATTGTGTTGTGTTGAGACAGGCTCTTACTGTGTAGCTCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTGTATTGTGTTGTGTTGAGACAGGCTCTTACTGTGTAGCTCTG  541

seq1  GCTGGTCAGGAATTAGCTGTGTAGACCAAGCTGGCCTAAAGCTCACAGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCAGGAATTAGCTGTGTAGACCAAGCTGGCCTAAAGCTCACAGAG  591

seq1  ACCCTTCCCTCCTGCCTCTGAGACCGACTGTTGGGGTTGAGGCTATATGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCCCTCCTGCCTCTGAGACCGACTGTTGGGGTTGAGGCTATATGC  641

seq1  CACTATACCTGGCTTCTTTTTCCCTTTTTGAAAATGTTTTCAAAAGATTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATACCTGGCTTCTTTTTCCCTTTTTGAAAATGTTTTCAAAAGATTT  691

seq1  TATAGCCATTTTATGTCTAGAAAACATTGAACAATGTTTAGCTTTTCTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCATTTTATGTCTAGAAAACATTGAACAATGTTTAGCTTTTCTCT  741

seq1  CTTGAACAGTATAGTCACTCTAATAGACTTTCTGATTTTTAAACTTTGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACAGTATAGTCACTCTAATAGACTTTCTGATTTTTAAACTTTGAC  791

seq1  AGATTACCAAAGCTTTACCTGTGTGAATTCTGTCTTAAATATATGAAGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACCAAAGCTTTACCTGTGTGAATTCTGTCTTAAATATATGAAGAG  841

seq1  TAAAAATATTTTGCTAAGACACTCAAAGAAGTGTGGATGGTTTCATCCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATTTTGCTAAGACACTCAAAGAAGTGTGGATGGTTTCATCCTC  891

seq1  CGGCCAATGAGATTTACCGAAGGAAAGACCTTTCAGTATTCGAGGTAAGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCAATGAGATTTACCGAAGGAAAGACCTTTCAGTATTCGAGGTAAGC  941

seq1  AAGTATAAACAAAAACATGGTCTTTTTGAACCCTAATATTCCTAACTGTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAACAAAAACATGGTCTTTTTGAACCCTAATATTCCTAACTGTT  991

seq1  GACTGTGTGCTTGGATGGTTTGTGTATAGATAGCACAGTGTGTATTCAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGTGCTTGGATGGTTTGTGTATAGATAGCACAGTGTGTATTCAAT  1041

seq1  CTTAGCATCGGAATTC  1062
      ||||||||||||||||
seq2  CTTAGCATCGGAATTC  1057