BAC Information

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BAC

Clone NameB6Ng01-054M15
Chromosome14 (Build37)
Map Location 16,057,838 - 16,058,981
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLrrc3b, LOC667205, 1700062C10Rik, LOC667209, EG435389
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054M15.bB6Ng01-054M15.g
ACCDH877439DH877440
length1,1121,066
definitionDH877439|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M15, 5' end.DH877440|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaacaaggctaaagaagccactgttgtagggtaatgatctaat
gtcctcccagcggatattttggaatggatccataacaatgggccttcttg
ccacaataatcctgtgggttgcatctcagtaggtaatattatcaaaatga
tgggtaacccttctctacaatgctgaagctgggctttaatcaactcttct
tccactagggtaagggcctttctagcctcaggtgttaatttccttttgga
acttaactctgagtctccttctaaaatttgaaacaaagtatgcaaggaat
caaccttcaattgtatcttttgaggacaaaaggtcgcaggggcaatcctt
gctcctaaataggacactattttatcttgttgcactttctttggtgcaat
atgcaaaccccattgcctcaaactctccaccatctttccataggcttcct
gcaaatacttttcatcctttgctgcaagtaggatgtaatgaacacagcga
agtttgggatattctttcctaattggttccaatgcttttcctacataaag
ctggcacatgataggactattagccattccttgaggcaacaccacccact
caaatctaacactatctttcaaatccaagggaatggaaaagaaacaatct
ttaatatcaattactattagaggccacttttctggtagggcagataagag
aggtagacccctctgaatggagcccatcacctgcatctgtgcattaatag
cttgcagatcctgtaataacctccatttgccagatttctttctgataaca
aaattttgggtattccatggagatacagaagttgaatatgacctaaaaga
tatagtttgtgccttcgctcttagtagctcattgagcgctgaaaaattgg
gtgtgactgtgatgaccccataccttgtctttcatgctccacacagtcgc
catagcaacaaaaaaggctcagaaaattactccaatggctagaaaagaag
gaatccatagactgtccctattaccctctgctcacttctacttatttccc
tctacgtacctgtcattcaagcaagtgcttattgtctcgagccgaagcta
tttgtcctttac
gaattcctgatctttccaagacttttatcacgaatgggtgttagattttg
tcaaatgctttctcagcatctagtgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggatttctgtatatatatta
acccatccctgcatccctgggatgaagcctacttcatcatgatggatgat
cattttgatatgttcttgaattgagattgcaagaaatttattgggtattt
ttgcatatgggactgtttagattgttattctgatcctgatttaactttgg
tacctggtatctgtctagaaaactgtccatttcatccaggctttccagtt
ttgttgagtatagtcttttgtagtaggatctgatgacgttttggatttcc
tcaggttaaaaaaacagttcctggtttggttgattcttttaagagttctt
tttgtttccacttggttgatttcagccctgagtttgattatttcctgcca
tctactcctctttggtgaagttgcttccttttgttctagagcttttaggt
gtgctgtcaagctgctagtgtatgctctgtccaatttctttttgaaggca
gtcagagctaagggtccccttacgactgcattcattgtgtcccataagtt
tgggtatgtgtagcttcattttcattaaactctaaaaagtctttaagttc
ttttttttcttccttgaccaagttatcattgaatagagtgttgttcagct
tccaggttaatgttggcttcctattatttatgttatttgttgaagatcag
ccttagccagtggtgattagatagggtgcatggaattattttaatatttt
tgtatctgttaaggtctgtcttgagaccaattatatggtcagttttggag
aatgtaccatgaggtctgagaagaaggtatataccctttgtcttaagata
aatgtctgtagatacctgttaatccacttggttcataacttctgttagtt
tcctgtgtcttggttagatgattaaccatgatccctccatgtagagaagg
gggagttgaaatcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16057838_16058981
seq2: B6Ng01-054M15.b_44_1155

seq1  GAATTCCTAACAAGGCTAAAGAAGCCACTGTTGTAGGGTAATGATCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACAAGGCTAAAGAAGCCACTGTTGTAGGGTAATGATCTAAT  50

seq1  GTCCTCCCAGCGGATATTTTGGAATGGATCCATAACAATGGGCCTTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCCAGCGGATATTTTGGAATGGATCCATAACAATGGGCCTTCTTG  100

seq1  CCACAATAATCCTGTGGGTTGCATCTCAGTAGGTAATATTATCAAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATAATCCTGTGGGTTGCATCTCAGTAGGTAATATTATCAAAATGA  150

seq1  TGGGTAACCCTTCTCTACAATGCTGAAGCTGGGCTTTAATCAACTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAACCCTTCTCTACAATGCTGAAGCTGGGCTTTAATCAACTCTTCT  200

seq1  TCCACTAGGGTAAGGGCCTTTCTAGCCTCAGGTGTTAATTTCCTTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAGGGTAAGGGCCTTTCTAGCCTCAGGTGTTAATTTCCTTTTGGA  250

seq1  ACTTAACTCTGAGTCTCCTTCTAAAATTTGAAACAAAGTATGCAAGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTCTGAGTCTCCTTCTAAAATTTGAAACAAAGTATGCAAGGAAT  300

seq1  CAACCTTCAATTGTATCTTTTGAGGACAAAAGGTCGCAGGGGCAATCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTCAATTGTATCTTTTGAGGACAAAAGGTCGCAGGGGCAATCCTT  350

seq1  GCTCCTAAATAGGACACTATTTTATCTTGTTGCACTTTCTTTGGTGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAAATAGGACACTATTTTATCTTGTTGCACTTTCTTTGGTGCAAT  400

seq1  ATGCAAACCCCATTGCCTCAAACTCTCCACCATCTTTCCATAGGCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACCCCATTGCCTCAAACTCTCCACCATCTTTCCATAGGCTTCCT  450

seq1  GCAAATACTTTTCATCCTTTGCTGCAAGTAGGATGTAATGAACACAGCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATACTTTTCATCCTTTGCTGCAAGTAGGATGTAATGAACACAGCGA  500

seq1  AGTTTGGGATATTCTTTCCTAATTGGTTCCAATGCTTTTCCTACATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGATATTCTTTCCTAATTGGTTCCAATGCTTTTCCTACATAAAG  550

seq1  CTGGCACATGATAGGACTATTAGCCATTCCTTGAGGCAACACCACCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACATGATAGGACTATTAGCCATTCCTTGAGGCAACACCACCCACT  600

seq1  CAAATCTAACACTATCTTTCAAATCCAAGGGAATGGAAAAGAAACAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTAACACTATCTTTCAAATCCAAGGGAATGGAAAAGAAACAATCT  650

seq1  TTAATATCAATTACTATTAGAGGCCACTTTTCTGGTAGGGCAGATAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCAATTACTATTAGAGGCCACTTTTCTGGTAGGGCAGATAAGAG  700

seq1  AGGTAGACCCCTCTGAATGGAGCCCATCACCTGCATCTGTGCATTAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGACCCCTCTGAATGGAGCCCATCACCTGCATCTGTGCATTAATAG  750

seq1  CTTGCAGATCCTGTAATAACCTCCATTTGCCAGATTTCTTTCTGATAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGATCCTGTAATAACCTCCATTTGCCAGATTTCTTTCTGATAACA  800

seq1  AAATTTTGGGTATTCCATGGAGATACAGAAGGTTGAATATGACCTAAAAG  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATTTTGGGTATTCCATGGAGATACAGAA-GTTGAATATGACCTAAAAG  849

seq1  ATATAGTTTTGTGCCCTTCGCTCTTAGTAGCTCATTGAGCGCTGAAAAAA  900
      |||||| |||||| |||||||||||||||||||||||||||||| |||||
seq2  ATATAG-TTTGTG-CCTTCGCTCTTAGTAGCTCATTGAGCGCTG-AAAAA  896

seq1  TTGGGTGTGACTGTGATGACCCCATACCTTGTCTTTCATGCTCCACACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGTGACTGTGATGACCCCATACCTTGTCTTTCATGCTCCACACAG  946

seq1  TCGCCATAGCAACAAAAAAAGGCTCAGAAAAATTACTCCAATGGCTAGAA  1000
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  TCGCCATAGCAAC-AAAAAAGGCTCAG-AAAATTACTCCAATGGCTAGAA  994

seq1  AAAGAAAGTAATCCATAGACTGTCCCTATTACCCTCTTGCTTTCACTTTC  1050
      ||   ||| ||||||||||||||||||||||||||| |||  ||||||  
seq2  AA--GAAGGAATCCATAGACTGTCCCTATTACCCTC-TGC--TCACTT--  1037

seq1  TTACTTTTATTTTCTCTCTTACTTTCACTTTCTCATCTCCAGAGCCAGAG  1100
       |||||    |||| ||| ||| | |    | |||| || ||   || ||
seq2  CTACTT---ATTTCCCTC-TACGTAC---CTGTCAT-TCAAG---CA-AG  1075

seq1  TGCCTTATTGTCTCCAGAGCCAGAGAGCCTATTTGTCTCTTTAC  1144
      || |||||||||||  |||||   ||  ||||||||| ||||||
seq2  TG-CTTATTGTCTC--GAGCC---GAAGCTATTTGTC-CTTTAC  1112