BAC Information

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BAC

Clone NameB6Ng01-054M21
Chromosome14 (Build37)
Map Location 87,655,177 - 87,771,525
singlet/doubletdoublet
Overlap geneEG665324
Upstream geneEG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
Downstream geneTdrd3, LOC100043317, LOC100043780, LOC668624
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054M21.bB6Ng01-054M21.g
ACCDH877448DH877449
length1,0931,149
definitionDH877448|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M21, 5' end.DH877449|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,770,435 - 87,771,525)(87,655,177 - 87,656,345)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttatgtgg
ggcattttcattcaaataaccacatcacgttttaggtccatgaattagtg
aagaccaaggaacagaaccccaacctgcctttaatgtacactaaagaaat
tctccaggatttttcatggaaacaacatcagcgtataaaggaaaatggtt
ttcaggttacagtgcctgaggatgaggcaagaaacagcactgaatcagac
tcaacagacccaaggaaaccaaggaacctcaagatcagtggctggtgctg
tgtcagagacgaaagtgcaggaacttgagcagccttgctcaaagcagcag
tccccttccaggttcttccttccaaacatcacaaacttttagagaaattg
aaaacgttggtttcatggaaatctaccaaaaatttaaaagttttgtcaga
taatcgaaacttaaaacaaacaaacaaaaaaacaaacaaaaaaccaccat
tatggccaatgcctttcagactaagcaagaaaatgtctccatgcagatat
aatttatagacgagctatttttgctttcattgccatttccattctttgag
tcctgtcttgtgactggaacaaaaggccatgtgaagattcaacgtaatta
tggttctgcttccttactctctgctttatacaatagatttaatactttaa
tatttatcactattaaagacttatccttatttatgtttccatgggattgt
aaatgtatgccacaatctggggtgtgtgctctcagaacccagaaaaccat
ggagttgcagttacagcacttggggagccacaaatgcatgttg
gaattccaccctcatttaccaggtccttcagactccctaccctcgcccca
atctttatatacaggatacttttattcattagcttttcttgtcaccccaa
tcatctatttgacacaaaaaaatgtgcaagaggtaagacttaacatttga
aatgtaaataaagaaatgtccaattaaaaaaaaaagaggtaagactaatt
tcggctcactgaaagggttcagtgcactgtggcagaggaggcatgggtgg
aggagtttacatcatggctgacagtaagcagaaaggcggaggaaggcatc
aaaaacaaatacagctcccctagacatgccttgcatgactttcagattaa
gccccgcctcttacttttcatctccttgcaatgatgtcaccatattatga
atccatcaagggaccacgcctttcactaggtcagagccttcaaatgcatt
ttactaatctcttagatgtttattagtcttattggcttgatcagtgaaat
taattatctcaatatcattagaaagttaatagggaactgctcacttcttt
gataggctctctctcaacagaaaagtctttatatatttttgaaaaggatc
ctttaggctgcagactggtgatggtcagccatataattagtactgactag
agtcttcccagtcttgttgatcttacacagcatgatattttcattcaggg
tttagtaaatataatgcatagtcctgggaattcacaagggcactgagtta
tttcaaactaagccagactgaaaactattataaggatttagttgctgagc
ctagaagtgacgaaatgacttctgatgaggcactttcaatagacatatat
ttaaataggattcttacagttgccaagtagtggcactaagagtgtaagaa
atgtataaaggatatacgatcctccttcagcaaacatctagaagcaacca
gttgtcagggagactctggcaaactagataaatgtgaaatagcccctgct
catgcaagatgtactttctggtgcaaatggatgttcacgctgactcatct
aggtcatgaaaactccaacgagggcatagcattcaacggaaaaggaggga
gcattccacacctcccctgagtcaaggaagcctatgacgctgcttccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87770435_87771525
seq2: B6Ng01-054M21.b_45_1137 (reverse)

seq1  CAACATGCATTTGTGGCT-CACAAGTGCTTGTAACTGCAACTCCATGGTT  49
      |||||||||||||||||| | ||||||| |||||||||||||||||||||
seq2  CAACATGCATTTGTGGCTCCCCAAGTGC-TGTAACTGCAACTCCATGGTT  49

seq1  TTCTGGGTTCTGAGAGCACACA-CACAGA-TGTGGCATACATTTACATTC  97
      |||||||||||||||||||||| | |||| ||||||||||||||||| ||
seq2  TTCTGGGTTCTGAGAGCACACACCCCAGATTGTGGCATACATTTACAATC  99

seq1  ACATGGAAACATAAATAAGGATAAGTCTTTAATAGTGATAAATATTAAAG  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAAACATAAATAAGGATAAGTCTTTAATAGTGATAAATATTAAAG  149

seq1  TATTAAATCTATTGTATAAAGCAGAGAGTAAGGAAGCAGAACCATAATTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATCTATTGTATAAAGCAGAGAGTAAGGAAGCAGAACCATAATTA  199

seq1  CGTTGAATCTTCACATGGCCTTTTGTTCCAGTCACAAGACAGGACTCAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGAATCTTCACATGGCCTTTTGTTCCAGTCACAAGACAGGACTCAAA  249

seq1  GAATGGAAATGGCAATGAAAGCAAAAATAGCTCGTCTATAAATTATATCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAAATGGCAATGAAAGCAAAAATAGCTCGTCTATAAATTATATCT  299

seq1  GCATGGAGACATTTTCTTGCTTAGTCTGAAAGGCATTGGCCATAATGGTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAGACATTTTCTTGCTTAGTCTGAAAGGCATTGGCCATAATGGTG  349

seq1  GTTTTTTGTTTGTTTTTTTGTTTGTTTGTTTTAAGTTTCGATTATCTGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTGTTTTTTTGTTTGTTTGTTTTAAGTTTCGATTATCTGAC  399

seq1  AAAACTTTTAAATTTTTGGTAGATTTCCATGAAACCAACGTTTTCAATTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTTAAATTTTTGGTAGATTTCCATGAAACCAACGTTTTCAATTT  449

seq1  CTCTAAAAGTTTGTGATGTTTGGAAGGAAGAACCTGGAAGGGGACTGCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAAGTTTGTGATGTTTGGAAGGAAGAACCTGGAAGGGGACTGCTG  499

seq1  CTTTGAGCAAGGCTGCTCAAGTTCCTGCACTTTCGTCTCTGACACAGCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGCAAGGCTGCTCAAGTTCCTGCACTTTCGTCTCTGACACAGCAC  549

seq1  CAGCCACTGATCTTGAGGTTCCTTGGTTTCCTTGGGTCTGTTGAGTCTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTGATCTTGAGGTTCCTTGGTTTCCTTGGGTCTGTTGAGTCTGA  599

seq1  TTCAGTGCTGTTTCTTGCCTCATCCTCAGGCACTGTAACCTGAAAACCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCTGTTTCTTGCCTCATCCTCAGGCACTGTAACCTGAAAACCAT  649

seq1  TTTCCTTTATACGCTGATGTTGTTTCCATGAAAAATCCTGGAGAATTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTATACGCTGATGTTGTTTCCATGAAAAATCCTGGAGAATTTCT  699

seq1  TTAGTGTACATTAAAGGCAGGTTGGGGTTCTGTTCCTTGGTCTTCACTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTACATTAAAGGCAGGTTGGGGTTCTGTTCCTTGGTCTTCACTAA  749

seq1  TTCATGGACCTAAAACGTGATGTGGTTATTTGAATGAAAATGCCCCACAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGACCTAAAACGTGATGTGGTTATTTGAATGAAAATGCCCCACAT  799

seq1  AAAAGCCTTGAAGATATGGGTACAGGGGAAAAATTCCTGAACAGAACAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTTGAAGATATGGGTACAGGGGAAAAATTCCTGAACAGAACAGC  849

seq1  AATGGCTTGCTCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTGCTCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAAC  899

seq1  TCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCA  949

seq1  CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACT  999

seq1  AATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAA  1049

seq1  ATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1093

seq1: chr14_87655177_87656345
seq2: B6Ng01-054M21.g_67_1215

seq1  GAATTCCACCCTCATTTACCAGGTCCTTCAGACTCCCTACCCTCGCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCCTCATTTACCAGGTCCTTCAGACTCCCTACCCTCGCCCCA  50

seq1  ATCTTTATATACAGGATACTTTTATTCATTAGCTTTTCTTGTCACCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATATACAGGATACTTTTATTCATTAGCTTTTCTTGTCACCCCAA  100

seq1  TCATCTATTTGACACAAAAAAATGTGCAAGAGGTAAGACTTAACATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATTTGACACAAAAAAATGTGCAAGAGGTAAGACTTAACATTTGA  150

seq1  AATGTAAATAAAGAAATGTCCAATTAAAAAAAAAAGAGGTAAGACTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATAAAGAAATGTCCAATTAAAAAAAAAAGAGGTAAGACTAATT  200

seq1  TCGGCTCACTGAAAGGGTTCAGTGCACTGTGGCAGAGGAGGCATGGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCACTGAAAGGGTTCAGTGCACTGTGGCAGAGGAGGCATGGGTGG  250

seq1  AGGAGTTTACATCATGGCTGACAGTAAGCAGAAAGGCGGAGGAAGGCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTACATCATGGCTGACAGTAAGCAGAAAGGCGGAGGAAGGCATC  300

seq1  AAAAACAAATACAGCTCCCCTAGACATGCCTTGCATGACTTTCAGATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAATACAGCTCCCCTAGACATGCCTTGCATGACTTTCAGATTAA  350

seq1  GCCCCGCCTCTTACTTTTCATCTCCTTGCAATGATGTCACCATATTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGCCTCTTACTTTTCATCTCCTTGCAATGATGTCACCATATTATGA  400

seq1  ATCCATCAAGGGACCACGCCTTTCACTAGGTCAGAGCCTTCAAATGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAAGGGACCACGCCTTTCACTAGGTCAGAGCCTTCAAATGCATT  450

seq1  TTACTAATCTCTTAGATGTTTATTAGTCTTATTGGCTTGATCAGTGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATCTCTTAGATGTTTATTAGTCTTATTGGCTTGATCAGTGAAAT  500

seq1  TAATTATCTCAATATCATTAGAAAGTTAATAGGGAACTGCTCACTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCTCAATATCATTAGAAAGTTAATAGGGAACTGCTCACTTCTTT  550

seq1  GATAGGCTCTCTCTCAACAGAAAAGTCTTTATATATTTTTGAAAAGGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCTCTCTCTCAACAGAAAAGTCTTTATATATTTTTGAAAAGGATC  600

seq1  CTTTAGGCTGCAGACTGGTGATGGTCAGCCATATAATTAGTACTGACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGCTGCAGACTGGTGATGGTCAGCCATATAATTAGTACTGACTAG  650

seq1  AGTCTTCCCAGTCTTGTTGATCTTACACAGCATGATATTTTCATTCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCCAGTCTTGTTGATCTTACACAGCATGATATTTTCATTCAGGG  700

seq1  TTTAGTAAATATAATGCATAGTCCTGGGAATTCACAAGGGCACTGAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAAATATAATGCATAGTCCTGGGAATTCACAAGGGCACTGAGTTA  750

seq1  TTTCAAACTAAGCCAGACTGAAAACTATTATAAGGATTTAGTTGCTGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACTAAGCCAGACTGAAAACTATTATAAGGATTTAGTTGCTGAGC  800

seq1  CTAGAAGTGACGAAATGACTTCTGATGAGGCACTTTCAATAGACATATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGTGACGAAATGACTTCTGATGAGGCACTTTCAATAGACATATAT  850

seq1  TTAAATAGGATTCTTACAGTTGCCAAGTAGTGGCACTAAGAGGTGTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTAAATAGGATTCTTACAGTTGCCAAGTAGTGGCACTAAGA-GTGTAAGA  899

seq1  AATGTATAAAGGATATACGATCCTCCTTCAGCAAACATCTAGAAAGCAAC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATGTATAAAGGATATACGATCCTCCTTCAGCAAACATCTAG-AAGCAAC  948

seq1  CAGTTGTCAGGGAGAACTCTGGCAAACTAGATAAAAGGTGAAAATAGCCC  1000
      |||||||||||||| ||||||||||||||||| ||| ||| |||||||||
seq2  CAGTTGTCAGGGAG-ACTCTGGCAAACTAGAT-AAATGTG-AAATAGCCC  995

seq1  CTGCTCATTGCAAAGATGTTACTTTCTGGTGGCAAAATGGATGTTCACGC  1050
      ||||||| ||| |||||| ||||||||||||   ||||||||||||||||
seq2  CTGCTCA-TGC-AAGATG-TACTTTCTGGTG--CAAATGGATGTTCACGC  1040

seq1  TGACATTCATCTAGGTCATGATAAACT-CAACAGAGGCATAGCATTCAAC  1099
      ||||  ||||||||||||||| ||||| ||||   |||||||||||||||
seq2  TGAC--TCATCTAGGTCATGA-AAACTCCAACGAGGGCATAGCATTCAAC  1087

seq1  AGGAGAAAGGAGGGAGGCATCCAACAACCACCCCAGAGCCAAGGAGAGCT  1149
       ||| |||||||||| |||| | || ||| |||| ||| |||||| ||| 
seq2  -GGA-AAAGGAGGGA-GCATTCCAC-ACCTCCCCTGAGTCAAGGA-AGCC  1132

seq1  TTAATGACAGCTGCTTCCCT  1169
      |  ||||| |||||||||||
seq2  T--ATGAC-GCTGCTTCCCT  1149