BAC Information

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BAC

Clone NameB6Ng01-054P11
Chromosome14 (Build37)
Map Location 106,547,777 - 106,548,839
singlet/doubletsinglet
Overlap genenone
Upstream geneRbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52
Downstream geneLOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054P11.bB6Ng01-054P11.g
ACCDH877564DH877565
length9201,057
definitionDH877564|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P11, 5' end.DH877565|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagatacccac
gatataagatacaatttcctaaacacatgaaactcaagaaaaatgaagac
tgaagtgtggacactatgcccctccttagaagtgggaacaaaacacccat
ggaagaagttacagaaacaaagtatggagctgagatgaaaggatggacca
tgtagagactgccatatccagggatccaccccataatcagcttccaaatg
ctgacaccattgcatacactagcaagattttactgaaaggacccagatgt
agctgtctcttgtgagactatgccggggcctagcaaacacagaagtggat
gctcacagtcagctaatggatggatcacagggctcccaatggaggagcta
gagaaagtacccaaggagctaaagggatcttcaaccctataggtggaaca
acattatgaactaaccagtacccctgagctcttgactctagctgcatatg
tatcaaaagatggcctagtcggccatcactggaaagagaggcccattgga
cacgcagactttgtgtgccccggtacaggggaacgccagggccaaagggg
gggagtggggtgggtaaggg
gaattctttgtttagctctaagccccatttttttttgagctcaccacagt
gtccttttctctggcagactgggccaccacagcctttacgaaagccttgg
catgggcagccccaccacctgctgtgcctagttgctgcttctcagtgcca
gtgacacacacacacacacacacacacacacacacagcctcagaggatat
gggataggagtttctgaggttgtggggtcacccacagagtccagagagca
tatttctggccaaggaactgtctgtctctctttacaacagcaaagttggt
gtggttttggccaatgagagtaagaaactagtgagcactgagtttctgtg
ccactgatgctttactgagacattgggaagaagagtgagaaagtataact
acagagtctaaaacaaaaaagcccctgactatgcatagcgcatctccctg
acttccctgaaggatctgacttggatgtcagaggtatatgtggttaccat
gaagatgaaggggggaagaaagatgcaggtaggaaaactacctgtgttac
tttgggagactgaggcaggatgatcaggccagcctgggctacatgagata
tggtcttgaaaatatagttgaatatctgatctctatgaaataaccttacc
tatgacatttgaattttaaatagattctcatggtacatttatttatagtc
tttttttttaattaggtattttcctcatttacattttcaatgctatccca
aagggtcccccatacccacccacccccaatcccctacccacccactcccc
ctttttggccctggcgttcccctgtactggggcatataaagtttgcaagt
ccaatgggcctctctttgcagtgatggccgactaggccatcttttgatac
atatgcagctgaagacatgagctcccgggtactggttgttcatattgtgt
tccacctatagggtggcagttcctatagctccttgggtaattctctagct
cctcataaggggccgtgtgaccatccaaaagctgacgtgatctccatctt
ctgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106547777_106548839
seq2: B6Ng01-054P11.g_68_1124 (reverse)

seq1  AACACAGAAG-TGGATGATCACAGTCAGCTATTGGATGGGTCACACGGCC  49
      |||||||||| |||| |||||| ||||||| |||||| ||||||||||||
seq2  AACACAGAAGATGGA-GATCAC-GTCAGCTTTTGGAT-GGTCACACGGCC  47

seq1  CCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTATAGGGAACTGCAA  99
      ||| || |||||||||||| ||||||||||||||||||| |||||||| |
seq2  CCTTAT-GAGGAGCTAGAG-AATTACCCAAGGAGCTATA-GGAACTGCCA  94

seq1  CCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCGGGAGCTCATG  149
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  CCCTATAGGTGGAAC-ACAATATGAAC-AACCAGTACCCGGGAGCTCATG  142

seq1  TCTTCAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAA  192

seq1  AGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAAC  242

seq1  GCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGATTGGGGGTGGGTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGATTGGGGGTGGGTGG  292

seq1  GTATGGGGGA-CCTTTGGGATAGCATTGAAAATGTAAATGAGGAAAATAC  348
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGGGACCCTTTGGGATAGCATTGAAAATGTAAATGAGGAAAATAC  342

seq1  CTAATTAAAAAAAAAGACTATAAATAAATGTACCATGAGAATCTATTTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAAAAAAAAAGACTATAAATAAATGTACCATGAGAATCTATTTAA  392

seq1  AATTCAAATGTCATAGGTAAGGTTATTTCATAGAGATCAGATATTCAACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAATGTCATAGGTAAGGTTATTTCATAGAGATCAGATATTCAACT  442

seq1  ATATTTTCAAGACCATATCTCATGTAGCCCAGGCTGGCCTGATCATCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCAAGACCATATCTCATGTAGCCCAGGCTGGCCTGATCATCCTG  492

seq1  CCTCAGTCTCCCAAAGTAACACAGGTAGTTTTCCTACCTGCATCTTTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTCTCCCAAAGTAACACAGGTAGTTTTCCTACCTGCATCTTTCTT  542

seq1  CCCCCCTTCATCTTCATGGTAACCACATATACCTCTGACATCCAAGTCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTTCATCTTCATGGTAACCACATATACCTCTGACATCCAAGTCAG  592

seq1  ATCCTTCAGGGAAGTCAGGGAGATGCGCTATGCATAGTCAGGGGCTTTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCAGGGAAGTCAGGGAGATGCGCTATGCATAGTCAGGGGCTTTTT  642

seq1  TGTTTTAGACTCTGTAGTTATACTTTCTCACTCTTCTTCCCAATGTCTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGACTCTGTAGTTATACTTTCTCACTCTTCTTCCCAATGTCTCA  692

seq1  GTAAAGCATCAGTGGCACAGAAACTCAGTGCTCACTAGTTTCTTACTCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCATCAGTGGCACAGAAACTCAGTGCTCACTAGTTTCTTACTCTC  742

seq1  ATTGGCCAAAACCACACCAACTTTGCTGTTGTAAAGAGAGACAGACAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCAAAACCACACCAACTTTGCTGTTGTAAAGAGAGACAGACAGTT  792

seq1  CCTTGGCCAGAAATATGCTCTCTGGACTCTGTGGGTGACCCCACAACCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCCAGAAATATGCTCTCTGGACTCTGTGGGTGACCCCACAACCTC  842

seq1  AGAAACTCCTATCCCATATCCTCTGAGGCTGTGTGTGTGTGTGTGTGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTCCTATCCCATATCCTCTGAGGCTGTGTGTGTGTGTGTGTGTGT  892

seq1  GTGTGTGTGTGTCACTGGCACTGAGAAGCAGCAACTAGGCACAGCAGGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTCACTGGCACTGAGAAGCAGCAACTAGGCACAGCAGGTG  942

seq1  GTGGGGCTGCCCATGCCAAGGCTTTCGTAAAGGCTGTGGTGGCCCAGTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCTGCCCATGCCAAGGCTTTCGTAAAGGCTGTGGTGGCCCAGTCT  992

seq1  GCCAGAGAAAAGGACACTGTGGTGAGCTCAAAAAAAAATGGGGCTTAGAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGAAAAGGACACTGTGGTGAGCTCAAAAAAAAATGGGGCTTAGAG  1042

seq1  CTAAACAAAGAATTC  1063
      |||||||||||||||
seq2  CTAAACAAAGAATTC  1057