BAC Information

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BAC

Clone NameB6Ng01-055C05
Chromosome14 (Build37)
Map Location 7,197,602 - 7,285,138
singlet/doubletdoublet
Overlap geneEG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964
Upstream geneLOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000
Downstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055C05.bB6Ng01-055C05.g
ACCDH877684DH877685
length1,0911,071
definitionDH877684|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C05, 5' end.DH877685|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,284,023 - 7,285,138)(7,197,602 - 7,198,693)
sequence
gaattcaagtagctatccaccataagagctaagaacaccatctaaaaatg
gggtatagaactacacaaaaatttcacaatgaatcttgaatggctgagag
cactgaagaagtgtgcaacgtccttagtattcagggaataaaaccaaaat
ggccctgaggttggtgtccagcagtatactttctactgaagaatgctaag
atcaaaaactcatgtttaaacacatggtcagaatttgaagaaagaggaac
attcttccatttctggtgggactgcaaactgctatgacaactatagaaat
caatatggaggttcctcagaaattcccacatagatctacttgaaggccat
gtaccaaccttactgttgaatggtctgctactttcagttttcacttgatg
gcttattactcagattttcttatttattgagctatgactttgctcttggt
aagcatttggtctctgattctcaatcagttctctgttcttaacacaattt
ttaaggtacctctagcaactggggcttatttataccttcaaatccctcta
aattgggggacttcttatacttgaggaagctgagtgacaaaatcaaagta
tgttgagccctttggtgtctagtgcacacgaatctatgggagtctaggta
tgataatcctctagaacattctttaggaaagcagcaggaaagcagcagta
tgctctcaggtccctgtgtgacctcacttacctttgccagctttgtgagc
ttctctactgctggtctgagaacaattaggaattcatggaatagatgtct
catatctcatttcctttgtcattgttagtatactagtgggagtaggtttg
atggaaatatactctcaaacattaatcaaagcagtgcttggtcacaaaac
aggcctcacagatacagaacattgaaataatctgatgcatcttttcaatc
accaggtctacatcaaaagatcagaaagcccacatacacatggagctgaa
catgcactactcatgatacttggtcatgagaataaagacgaataagacct
tttagagtgtctgtaatgagtacaaccacccactatgagac
gaattcactcggacaaccggatccttctacggcaaagcttttattgcttc
cacataaggaagaccccgaacccggaaaatggtgctgcttatatagcccg
cagcgtgacggttcagcacctgatgtggcgtgacagcacctgattagttg
ctcgcccatcaccccattactacgccccgagatgggcagtgactgggcgt
gaatttactcttgcacttgcgcataaggcttgtttactagttaggctcag
tggaagccggcgccatcttataatggcgattgctaatggcacggctctcc
acatttcctcctttttattttattaaaatttgaggctggtctaggcctct
gcagtcatgtccatctgctgtggttactgtcttaggtcattcctccaatg
tcacagcctttcctgtcataggttaaccctatcaccaccgggtcccatgt
cttaggttggtctgtacatgaggaaagttgcccatctctggataagaagt
tagactcagccgggcatggtggtgcacacttttaatcccagcactggaga
ggcagaggcaggccgatttctgagttggaggccagcctggtctacaaatt
gagttccaggacagccagaggtatatagaaaaaccctgtctcgaaaccac
aaccaccaccccaaaagaagaagttagactccagaaaaccaaagaacccc
attaaaaatggggtacagagctaaacaataattctcaactgaggaatact
gaatggctgagacacctaaaaaatgttcaacatccttaatcatcaggaaa
tgcaaatcaaaacaaccgtagattccacctcagtcagaatggctaagatc
aaaatttcagttgacagcagatgctggcaaggttgtggagaagaggaaca
ctcctccattgttggtgggattgcagcttgtacaccactctggaaatcag
tttggtagttctcagaaatgacatagtactaccagaggatcagcatatta
ctctgggcatatactcagaagacgctcacttgacagtcaatgctccacta
tgttcatagcagctatttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7284023_7285138
seq2: B6Ng01-055C05.b_48_1138 (reverse)

seq1  GTCTCATAAGTTTGGGTGTGTTGTACCTTCATTTACACGACACTCTAAAA  50
      ||||||||    |||||| |||||||  ||| ||||| ||||||||||||
seq2  GTCTCATA---GTGGGTG-GTTGTAC--TCA-TTACA-GACACTCTAAAA  42

seq1  GGTCTTTAATTTCTGTCTTTATTTCTTCATTGACCAAGTTATCATTGAGT  100
      ||||||  |||   |||||||||   ||| |||||||| ||||| |||||
seq2  GGTCTT--ATT--CGTCTTTATT--CTCA-TGACCAAG-TATCA-TGAGT  83

seq1  AGTGCATTGTTCAGCTTCCATGTGTATGTGGGCTTTCTGATCTTTTTGAT  150
      |||||| |||||||| |||||||||||||||||||||||||| |||||||
seq2  AGTGCA-TGTTCAGC-TCCATGTGTATGTGGGCTTTCTGATC-TTTTGAT  130

seq1  GTTAGACCCTGGTGATTTGAAAAGATGCATCAGATTATTTCAATGTTCTT  200
      | |||| |||||||| |||||||||||||||||||||||||||||||| |
seq2  G-TAGA-CCTGGTGA-TTGAAAAGATGCATCAGATTATTTCAATGTTC-T  176

seq1  GTATCTGTTGAGGCCTGTTTTGTGACCAAGCACTGCTTTGATTAATGTTT  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTG-TGAGGCCTGTTTTGTGACCAAGCACTGCTTTGATTAATGTTT  225

seq1  GAGAGTATATTTCCATCAAACCTACTCCCACTAGTATACTAACAATGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTATATTTCCATCAAACCTACTCCCACTAGTATACTAACAATGACA  275

seq1  AAGGAAATGAGATATGAGACATCTATTCCATGAATTCCTAATTGTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATGAGATATGAGACATCTATTCCATGAATTCCTAATTGTTCTCA  325

seq1  GACCAGCAGTAGAGAAGCTCACAAAGCTGGCAAAGGTAAGTGAGGTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCAGTAGAGAAGCTCACAAAGCTGGCAAAGGTAAGTGAGGTCACA  375

seq1  CAGGGACCTGAGAGCATACTGCTGCTTTCCTGCTGCTTTCCTAAAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCTGAGAGCATACTGCTGCTTTCCTGCTGCTTTCCTAAAGAATG  425

seq1  TTCTAGAGGATTATCATACCTAGACTCCCATAGATTCGTGTGCACTAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGGATTATCATACCTAGACTCCCATAGATTCGTGTGCACTAGAC  475

seq1  ACCAAAGGGCTCAACATACTTTGATTTTGTCACTCAGCTTCCTCAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGGCTCAACATACTTTGATTTTGTCACTCAGCTTCCTCAAGTAT  525

seq1  AAGAAGTCCCCCAATTTAGAGGGATTTGAAGGTATAAATAAGCCCCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCCCCCAATTTAGAGGGATTTGAAGGTATAAATAAGCCCCAGTT  575

seq1  GCTAGAGGTACCTTAAAAATTGTGTTAAGAACAGAGAACTGATTGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGGTACCTTAAAAATTGTGTTAAGAACAGAGAACTGATTGAGAAT  625

seq1  CAGAGACCAAATGCTTACCAAGAGCAAAGTCATAGCTCAATAAATAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCAAATGCTTACCAAGAGCAAAGTCATAGCTCAATAAATAAGAA  675

seq1  AATCTGAGTAATAAGCCATCAAGTGAAAACTGAAAGTAGCAGACCATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAGTAATAAGCCATCAAGTGAAAACTGAAAGTAGCAGACCATTCA  725

seq1  ACAGTAAGGTTGGTACATGGCCTTCAAGTAGATCTATGTGGGAATTTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGGTTGGTACATGGCCTTCAAGTAGATCTATGTGGGAATTTCTG  775

seq1  AGGAACCTCCATATTGATTTCTATAGTTGTCATAGCAGTTTGCAGTCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTCCATATTGATTTCTATAGTTGTCATAGCAGTTTGCAGTCCCA  825

seq1  CCAGAAATGGAAGAATGTTCCTCTTTCTTCAAATTCTGACCATGTGTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGGAAGAATGTTCCTCTTTCTTCAAATTCTGACCATGTGTTTA  875

seq1  AACATGAGTTTTTGATCTTAGCATTCTTCAGTAGAAAGTATACTGCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGTTTTTGATCTTAGCATTCTTCAGTAGAAAGTATACTGCTGGA  925

seq1  CACCAACCTCAGGGCCATTTTGGTTTTATTCCCTGAATACTAAGGACGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACCTCAGGGCCATTTTGGTTTTATTCCCTGAATACTAAGGACGTT  975

seq1  GCACACTTCTTCAGTGCTCTCAGCCATTCAAGATTCATTGTGAAATTTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTTCTTCAGTGCTCTCAGCCATTCAAGATTCATTGTGAAATTTTT  1025

seq1  GTGTAGTTCTATACCCCATTTTTAGATGGTGTTCTTAGCTCTTATGGTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTCTATACCCCATTTTTAGATGGTGTTCTTAGCTCTTATGGTGG  1075

seq1  ATAGCTACTTGAATTC  1116
      ||||||||||||||||
seq2  ATAGCTACTTGAATTC  1091

seq1: chr14_7197602_7198693
seq2: B6Ng01-055C05.g_66_1136

seq1  GAATTCACTCGGACAACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCGGACAACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50

seq1  CACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGCTTATATAGCCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGCTTATATAGCCCG  100

seq1  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150

seq1  CTCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGT  200

seq1  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250

seq1  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300

seq1  ACATTTCCTCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCTCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350

seq1  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400

seq1  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450

seq1  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500

seq1  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550

seq1  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600

seq1  GAGTTCCAGGACAGCCAGAGGTATATAGAAAAACCCTGTCTCGAAACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGAGGTATATAGAAAAACCCTGTCTCGAAACCAC  650

seq1  AACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700

seq1  ATTAAAAATGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750

seq1  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCA-GGAA  799

seq1  ATGCAAATCAAAACAACCGTAGATTCCACCTCAGGTCAGAATGGCTAAGA  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGCAAATCAAAACAACCGTAGATTCCACCTCA-GTCAGAATGGCTAAGA  848

seq1  TCAAAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAGAAAGAGGA  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAAAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAG-AAGAGGA  897

seq1  ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA  950
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  ACACTCCTCCATTGTTGGTGGGATTGC-AGCTTGTAC-ACCACTCTGGAA  945

seq1  ATCAGTTTGGTAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGATC  1000
      ||||||||||||||| ||||||||    ||||||||||||||||||||| 
seq2  ATCAGTTTGGTAGTT-CTCAGAAA---TGACATAGTACTACCAGAGGAT-  990

seq1  CAGCAATATTACTCCTGGGCATATACCCAGAAGACGCTCCAACTTGTAAC  1050
      |||| |||||||| |||||||||||| ||||||||||||  |||||  ||
seq2  CAGC-ATATTACT-CTGGGCATATACTCAGAAGACGCTC--ACTTG--AC  1034

seq1  AAGGTCACATGCTCCACTATGTTCATAGCAGCCTTATTTATA  1092
      |  |||| ||||||||||||||||||||||||  ||||||||
seq2  A--GTCA-ATGCTCCACTATGTTCATAGCAGC--TATTTATA  1071