BAC Information

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BAC

Clone NameB6Ng01-055K10
Chromosome2 (Build37)14 (Build37)
Map Location 142,774,366 - 142,774,88656,378,976 - 56,379,219
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055K10.bB6Ng01-055K10.g
ACCDH878037DH878038
length1,085788
definitionDH878037|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K10, 5' end.DH878038|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,774,366 - 142,774,886)(56,378,976 - 56,379,219)
sequence
gaattctttgttcagctctgagccccattttctgcactaaacccttctgg
tcctgggctatttttggttgggagactattaatgactgcttctatttctt
taggggatataggactgtttagatcattaacctgatcttgatttaacttt
ggtacctggtatctgtctagaaacttgtccatttcatccaggttttccag
ttttgttaagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtttcccttttcatttctgattttgttaatt
aggatgctttacctgtggctttagtgtgtctggctaagggtttatctatc
ttgttgattttctcaaagaaccagctccttgattcgttgattctttgaat
agttcttcttgtttccacttggttgatttcacccctgagtttaattattt
cctgccttctactcctattgggtgaatttgcttccttttgttctagagca
tttaggtgtgttgtcaagctgctaatgtgtgctctctctagtttcttttt
ggtggcactcagagctatgagttttcctcttagaaatgctttcattgtgt
cccataagtttgggtatgttgtggcttcattttcattaaactccaaaaag
tccttaatttctttctttattccttccttgaccaaggtatcattgagaag
agtgttgttcagtttccacgtgaatgttggctttctattatttattttgt
tattgaagatcagctttagtccatggtgatctgataggatgcctgggaca
atttcaatatttttgtatatgttgaggcttgtattgtgaccagttatgtg
gtcaattttggagaaggtaccatgaggtgctgagaagaaggtatatcctt
ttgttttggataaaatgttctgtagatattgtaggtccatttgtttcatc
actctgctagtttcactgtgtccctgtttagttctgtttccatgatctgt
cattggtgataggggtgtgttgaagtctcccacatatgggggaggggcaa
tgggggcttgagcttactaaagtttctttatgaaa
gaattccaggaagtctttaatttctttctttataatcactaagtagagag
ttgttcagattccattagtatgtggtttttctgctgtttttgttttattg
aagactagccatggtgatctgatagtgaggtagacaaagaaggctcagaa
aatgtgtggcttaaatacttttggtgatgtgtctaaactaggactggtag
caacacccaggattctcatgcaccctggggataggttaaagcccccaggg
gttgggcaaaagccccaagacagactggtgactttggctggctgtgctct
cgcagctgcgcacaaagaggtttagcaccatctagtggcggcacatatat
tgcagccctttacagggtcacatgttcagaattgagattttaacttggtg
gatgttttcattgatgagtatgaagtgctttcccagcctagcttggtaag
ttttggttgaaagtctatttcaatggatattaaattggcaactcccactt
gtttcttggaaccatttgcttggaaaaatttttccatccttgtattgtgc
ttagtgtctgtctttgtcattgaagtgtgtttcttgaatgacataaaatc
ctggatcctgcttttgtatcctttctgttagcttatgtctctttattggg
gaattgagatcattgcttttgagagatgtgaaatacatatgattgttagt
gcctgttatgtgtgttgtgggaattggaattatgtgtgtgagtgatactc
tccttttggatttgttgtaagattattatttttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142774366_142774886
seq2: B6Ng01-055K10.b_625_1132 (reverse)

seq1  TTCATTAAAGAAACTTTAGTAAAGCTCAAGCACACATTGCACCTCACACA  50
      |||| ||||||||||||||| |||||||||| | |||||| |||| | | 
seq2  TTCA-TAAAGAAACTTTAGT-AAGCTCAAGCCCCCATTGCCCCTC-CCCC  47

seq1  ATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGACAGATCATG  100
      |||   |||||||||||||||||||| || |||||||| |||||||||||
seq2  ATA--TGTGGGAGACTTCAACACACCCCTATCACCAAT-GACAGATCATG  94

seq1  GAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAAC  150
      ||||||| ||||||||||||||||| |||||||| ||| |||||||||||
seq2  GAAACAG-AACTAAACAGGGACACAGTGAAACTAGCAG-AGTGATGAAAC  142

seq1  AAATGGACCTGACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGA  200
      |||||||||| ||| |||||||||||||||||||||| ||||||||||||
seq2  AAATGGACCT-ACA-ATATCTACAGAACATTTTATCC-AAAACAAAAGGA  189

seq1  TATACCTTCTTCTCAGCACCTCATTGTACCTTCTCCAAAATTGACCACAT  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATACCTTCTTCTCAGCACCTCATGGTACCTTCTCCAAAATTGACCACAT  239

seq1  AATAGGTCACAAAACAGGCCTCAACGGATTCAAAAATATTGAAATTGTCC  300
      ||  |||||||| ||| ||||||||  || ||||||||||||||||||||
seq2  AACTGGTCACAATACAAGCCTCAACATATACAAAAATATTGAAATTGTCC  289

seq1  CATGTATCCTATCAGATCACCATGCACTAAGGCTGATCTTCAATAACAAA  350
      || | ||||||||||||||||||| ||||| ||||||||||||||||  |
seq2  CAGGCATCCTATCAGATCACCATGGACTAAAGCTGATCTTCAATAAC--A  337

seq1  AAAAAAATAGTAGAAAGCCAACACTCACGCGGAAACTGAATAACACTCTT  400
      ||| ||||| ||||||||||||| ||||| |||||||||| |||||||||
seq2  AAATAAATAATAGAAAGCCAACATTCACGTGGAAACTGAACAACACTCTT  387

seq1  CTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTT  450
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAGGACTT  437

seq1  TTTAGAGTTTAATGAAAATGAAGCCACAACGTACCCAAACCTATGGGACA  500
      ||| |||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TTTGGAGTTTAATGAAAATGAAGCCACAACATACCCAAACTTATGGGACA  487

seq1  CAATGAAAGCATTTCTAAGAG  521
      |||||||||||||||||||||
seq2  CAATGAAAGCATTTCTAAGAG  508

seq1: chr14_56378976_56379219
seq2: B6Ng01-055K10.g_188_430

seq1  ATAGTGAGGTAGACAAAGAAGGCTCAGAAAGTGTGTGGCTTAAATACTTT  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAGTGAGGTAGACAAAGAAGGCTCAGAAAATGTGTGGCTTAAATACTTT  50

seq1  TGGTGACGTGTCTAAACTAGGACTGGTAGCAACACCCATGATCCTCATGC  100
      |||||| ||||||||||||||||||||||||||||||| ||| |||||||
seq2  TGGTGATGTGTCTAAACTAGGACTGGTAGCAACACCCAGGATTCTCATGC  100

seq1  ACCCTGGGGATAGGTTAAAGCCCCCAGGGGTTGGGCAAAAGCCCCGGAGA  150
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  ACCCTGGGGATAGGTTAAAGCCCCCAGGGGTTGGGCAAAAGCCCC-AAGA  149

seq1  CGGACTGGTGGCTTTGGCTGGCTGTGTTCTCGCAGCTGCGCACAAAGAGG  200
      | |||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  CAGACTGGTGACTTTGGCTGGCTGTGCTCTCGCAGCTGCGCACAAAGAGG  199

seq1  TTTAGCACCATCTAGTGGCGGCACATATATTGCAGCCCTTTACA  244
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCACCATCTAGTGGCGGCACATATATTGCAGCCCTTTACA  243