BAC Information

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BAC

Clone NameB6Ng01-056O13
Chromosome14 (Build37)
Map Location 44,783,986 - 44,785,057
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647
Downstream geneEG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056O13.bB6Ng01-056O13.g
ACCDH878928DH878929
length1,0581,127
definitionDH878928|Mus musculus domesticus DNA, BAC clone: B6Ng01-056O13, 5' end.DH878929|Mus musculus domesticus DNA, BAC clone: B6Ng01-056O13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaacaatatactacccaatgaaaagcccagggccaagtttggg
ttaccttgtttggggttgctcatcattgagtctcatacatactccccaat
cattaaagactgctgccattgctcttccttcctttctggaagtcaatggt
aagaccacattgctgaaggagatggtatctggcacaggcatcaataaaaa
atgaaaaaaaaaaaaaaagatctggcaactgttattctaatttcagcttc
tctaagtgggctaaactgaagagggagcccagggcctcatgtataccaag
cagcaaacactacaggagaatacactgtacttcaccacaacacactgcac
cacaccacactacagtatactacactagagaacccccagtcctcctgttt
ctctgagatcaactttctttcttagccctttctcagccttcctgcatgga
ttaactgcccaaacaaggtgaatgtaataaaagaaagtgaaccttttcca
ttttcataatccacattgaaatttactgtgcactctgtgcagagttcatg
accaccaggaacacctggcctcccttctccccattgtcacttaccgggtt
ccctctccattttttctgttgtctttctaatctgaggatacagccttgga
tactcaggttttgggtactttgtcctttccttcagacctctgtatttgct
gtgtctccccttaggactctgtgcatcaggctgagtttcttagtagagct
gtttctaactctgcatcagcagatactcacaggagcttctggccctcaga
caggtggttcttcaaagctttagagaagagatgtgactctgaagaacacc
ctaactgctgcagatggatggctgctgaacaaactccatgactagttgtc
ccaggaggttttgggactcctccaaatctggctgcactgcagcttctcct
agaattcaatgtgatgccttacaggtaagagcatcagtcaagtacaaaag
gtgccacatgacgcatcagaagcatgttcagaagcttgaagtctacatat
tcatgtaa
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacaagatgatcatgtggttttttgtctt
tgagtttgtttatataatgaattacattgatggattttcgtatattaaac
catccctgcatccctgtaataaaacctactcggtcaggatggatgattgc
tttaatgtgttcttggattcggttagcgagaattttattaaagatttttg
catcaatattcataacagaaattgatctgaagttctctatcttttttgga
tctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagtt
gggtagagcaccttctacttctatcttttgaaaaagtttgtgcagaactg
gaattagatcttctttgaaggtctgataaaactctgcactaaatccgtct
ggtcctgggctttttttggctgggagactattaataactgcttctatttc
tttaggggatatgggactgtttagaaggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccattacatttctgattttgttca
ttaggattttgtccctttgccctctagtgagtctagctaacggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttt
gaatagttcttcttgtttccacttggttgatttcacccctgagtttgatt
atttcctgccgtctactcctcttgggtgaatttgcttcctttttttctag
agcttttagatgtgctatcaagctgctagtatgtgctctctccgtttctt
cttggagcactcagaagcttgagtttcctcttagaatgtttcatgtggtc
ccaggtttgggacgttggggctctatttcataaacctaaaactcctattc
gcataatcttccctgacaaggtctttgaaagagggtgctcattcacggaa
gttggtttgtgtattattagtattgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44783986_44785057
seq2: B6Ng01-056O13.b_49_1106

seq1  GAATTCAGAACAATATACTACCCAATGAAAAGCCCAGGGCCAAGTTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACAATATACTACCCAATGAAAAGCCCAGGGCCAAGTTTGGG  50

seq1  TTACCTTGTTTGGGGTTGCTCATCATTGAGTCTCATACATACTCCCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTGTTTGGGGTTGCTCATCATTGAGTCTCATACATACTCCCCAAT  100

seq1  CATTAAAGACTGCTGCCATTGCTCTTCCTTCCTTTCTGGAAGTCAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAGACTGCTGCCATTGCTCTTCCTTCCTTTCTGGAAGTCAATGGT  150

seq1  AAGACCACATTGCTGAAGGAGATGGTATCTGGCACAGGCATCAATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACATTGCTGAAGGAGATGGTATCTGGCACAGGCATCAATAAAAA  200

seq1  ATGAAAAAAAAAAAAAAAGATCTGGCAACTGTTATTCTAATTTCAGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAAAAAAAAAAGATCTGGCAACTGTTATTCTAATTTCAGCTTC  250

seq1  TCTAAGTGGGCTAAACTGAAGAGGGAGCCCAGGGCCTCATGTATACCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGGGCTAAACTGAAGAGGGAGCCCAGGGCCTCATGTATACCAAG  300

seq1  CAGCAAACACTACAGGAGAATACACTGTACTTCACCACAACACACTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAACACTACAGGAGAATACACTGTACTTCACCACAACACACTGCAC  350

seq1  CACACCACACTACAGTATACTACACTAGAGAACCCCCAGTCCTCCTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCACACTACAGTATACTACACTAGAGAACCCCCAGTCCTCCTGTTT  400

seq1  CTCTGAGATCAACTTTCTTTCTTAGCCCTTTCTCAGCCTTCCTGCATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGATCAACTTTCTTTCTTAGCCCTTTCTCAGCCTTCCTGCATGGA  450

seq1  TTAACTGCCCAAACAAGGTGAATGTAATAAAAGAAAGTGAACCTTTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGCCCAAACAAGGTGAATGTAATAAAAGAAAGTGAACCTTTTCCA  500

seq1  TTTTCATAATCCACATTGAAATTTACTGTGCACTCTGTGCAGAGTTCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAATCCACATTGAAATTTACTGTGCACTCTGTGCAGAGTTCATG  550

seq1  ACCACCAGGAACACCTGGCCTCCCTTCTCCCCATTGTCACTTACCGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGGAACACCTGGCCTCCCTTCTCCCCATTGTCACTTACCGGGTT  600

seq1  CCCTCTCCATTTTTTCTGTTGTCTTTCTAATCTGAGGATACAGCCTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCCATTTTTTCTGTTGTCTTTCTAATCTGAGGATACAGCCTTGGA  650

seq1  TACTCAGGTTTTGGGTACTTTGTCCTTTCCTTCAGACCTCTGTATTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGGTTTTGGGTACTTTGTCCTTTCCTTCAGACCTCTGTATTTGCT  700

seq1  GTGTCTCCCCTTAGGACTCTGTGCATCAGGCTGAG-TTCTTAGTAGAGCT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGTCTCCCCTTAGGACTCTGTGCATCAGGCTGAGTTTCTTAGTAGAGCT  750

seq1  GTTTCTAACTCTGCATCAGCAGATACTCACAGGAGCTTCTGGCCCTCAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAACTCTGCATCAGCAGATACTCACAGGAGCTTCTGGCCCTCAGA  800

seq1  CAGGTGGTTCTTCAAAGCTTTAGAGAAGAGATGTGACTCTGAAGAACACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTTCTTCAAAGCTTTAGAGAAGAGATGTGACTCTGAAGAACACC  850

seq1  CTAACTGCTGCAGATGGATGGCTGCTGAACAAACTCCATGACTAGTTGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGCTGCAGATGGATGGCTGCTGAACAAACTCCATGACTAGTTGTC  900

seq1  CCAGGAGGGTTTTGGGACTCCTCCAAATCTGGCTGCACTGCAGCTTCTCC  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGA-GGTTTTGGGACTCCTCCAAATCTGGCTGCACTGCAGCTTCTCC  949

seq1  TAGAATTCAATGTGGATGCCTTACAGGTTAAGAGCATCAGTCAAGTACCA  999
      ||||||||||||| ||||||||||||| ||||||||||||||||||||  
seq2  TAGAATTCAATGT-GATGCCTTACAGG-TAAGAGCATCAGTCAAGTAC--  995

seq1  AAAAGGTGGCCACATGGACGCATCCAGAAAGGCATGGTACAGGAGAAGCT  1049
      ||||||| ||||||| ||||||| |||||  ||||| |     |||||||
seq2  AAAAGGT-GCCACAT-GACGCAT-CAGAA--GCATGTT----CAGAAGCT  1036

seq1  GAGAGTCCTACATATTCATGTAA  1072
         ||| ||||||||||||||||
seq2  TGAAGT-CTACATATTCATGTAA  1058