BAC Information

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BAC

Clone NameB6Ng01-057B15
Chromosome14 (Build37)
Map Location 12,860,329 - 13,036,036
singlet/doubletdoublet
Overlap genePtprg
Upstream geneFhit, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996, LOC100042441
Downstream gene3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022, LOC100042026, EG328354
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057B15.bB6Ng01-057B15.g
ACCDH879071DH879072
length7551,120
definitionDH879071|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B15, 5' end.DH879072|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,860,329 - 12,861,083)(13,034,896 - 13,036,036)
sequence
gaattcacaatagaccctcagttggcctgtcttctgttcttatggccctt
agacctggtgtgcacttcgggctcatctactccaaaaagtagaactccag
gtacaaagatgttggaagcatctttgcattaattgcagaaagcaatgaat
aaagatccgggtattgtgtgctaaacagtatggtattaaacaagccctct
gggatgtttatttgaatgtcgcgttgctgacagagatgctgaatatccat
tcctcttcacaacttagttcttctaaaactactctttcaatgaaagctga
ctgagcctataccttgggagtgactcactgggaaactggctggcatgtgg
aaaagatcgatgtcaccgtaatggacacatccctctgctcgtgcagattc
acaatgggaaatgtaagctgtctccttcaccccgactttcccaaagcagt
gcttagcgtatggagctgagagtggcctctggtttccagatgggaaccct
gagccaagggtctcatgtggccctgcctgtctttatggatctacaggtag
ttaatgggtactgggagagaaagattttctccagccatgcagtcactagt
aagctgcccgttttcctgtgactaaccccacacccaagtaaccctaatta
aactgactggatcaccaagtagggacatgagaggtaataggtagaatact
ttgaaagaaaaagcagatcagcaagaaatagagagatgagagggtggtgg
ttgtg
gaattccaggagaaccagggctacacagaaaacaaaaacaaaaacaaaaa
caaaacaaaaaaccccgtcttgagaaaccaaaccaaactaaccaaacaaa
cacacgtttctttaacattcaagaccgaacacacagctcccccaaggtca
gatcctgccaccgctcagtccttgtgcagcatgatgtatctttccaggga
cttccctgttccacatcagcagcagtcactgaagtctccattcgtgacac
aaaacaatggggccactagtccctcagcgcatgggctcaggtggccaaga
tttgtgttctcaatttaagatgaacaaccggtccacatttagctcagcag
ttaattggagcagagtccatccccaaaggattgtggcaagggccttgggc
ctctggcctcatctccatgtccagcctttaaacttctgatccctctaacc
cctgtgtattagccagcactgtactttaagaagccttctgctttgtgatt
ttaggagctgggaaagaggttctgatattaaacaaaacaaacaaaacaaa
ccaaaacaaccaaaaagaaaatcaagccactctgggaaagccactctcca
ggaagcccagtggacaagacacactatgattttcacagtctagagaacct
ttgagagatgcaatgtccccatcttttggagactgttcacgatttatctg
gagaagatgaaacactggtttgcagcttcacctctggacagagactcaaa
attattcaagtgggctgtttccaaccaccgccccccctccccccaccagc
aattgcatccttaaaatatgacagttactcactccatttttttttttaaa
ccccaagattcaaaacccagcagggcaaggggaactggtactgaactagc
cagtcaagctcacaggcttctctagacgtactggagaggctcagagtgct
agagcggatggtttagaccatttctttttcattctctctggtcgcctcca
gcaccaccaaatggacggttctaattcgtcactgtaccttgcacacggac
aaggacagtaaataccttatttactcgcctacaaatctgaacgtgggggg
tattccacaagatcatgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12860329_12861083
seq2: B6Ng01-057B15.b_45_799

seq1  GAATTCACAATAGACCCTCAGTTGGCCTGTCTTCTGTTCTTATGGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATAGACCCTCAGTTGGCCTGTCTTCTGTTCTTATGGCCCTT  50

seq1  AGACCTGGTGTGCACTTCGGGCTCATCTACTCCAAAAAGTAGAACTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGGTGTGCACTTCGGGCTCATCTACTCCAAAAAGTAGAACTCCAG  100

seq1  GTACAAAGATGTTGGAAGCATCTTTGCATTAATTGCAGAAAGCAATGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGATGTTGGAAGCATCTTTGCATTAATTGCAGAAAGCAATGAAT  150

seq1  AAAGATCCGGGTATTGTGTGCTAAACAGTATGGTATTAAACAAGCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCCGGGTATTGTGTGCTAAACAGTATGGTATTAAACAAGCCCTCT  200

seq1  GGGATGTTTATTTGAATGTCGCGTTGCTGACAGAGATGCTGAATATCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTTATTTGAATGTCGCGTTGCTGACAGAGATGCTGAATATCCAT  250

seq1  TCCTCTTCACAACTTAGTTCTTCTAAAACTACTCTTTCAATGAAAGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCACAACTTAGTTCTTCTAAAACTACTCTTTCAATGAAAGCTGA  300

seq1  CTGAGCCTATACCTTGGGAGTGACTCACTGGGAAACTGGCTGGCATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTATACCTTGGGAGTGACTCACTGGGAAACTGGCTGGCATGTGG  350

seq1  AAAAGATCGATGTCACCGTAATGGACACATCCCTCTGCTCGTGCAGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATCGATGTCACCGTAATGGACACATCCCTCTGCTCGTGCAGATTC  400

seq1  ACAATGGGAAATGTAAGCTGTCTCCTTCACCCCGACTTTCCCAAAGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGGAAATGTAAGCTGTCTCCTTCACCCCGACTTTCCCAAAGCAGT  450

seq1  GCTTAGCGTATGGAGCTGAGAGTGGCCTCTGGTTTCCAGATGGGAACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGCGTATGGAGCTGAGAGTGGCCTCTGGTTTCCAGATGGGAACCCT  500

seq1  GAGCCAAGGGTCTCATGTGGCCCTGCCTGTCTTTATGGATCTACAGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAGGGTCTCATGTGGCCCTGCCTGTCTTTATGGATCTACAGGTAG  550

seq1  TTAATGGGTACTGGGAGAGAAAGATTTTCTCCAGCCATGCAGTCACTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGGTACTGGGAGAGAAAGATTTTCTCCAGCCATGCAGTCACTAGT  600

seq1  AAGCTGCCCGTTTTCCTGTGACTAACCCCACACCCAAGTAACCCTAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCCGTTTTCCTGTGACTAACCCCACACCCAAGTAACCCTAATTA  650

seq1  AACTGACTGGATCACCAAGTAGGGACATGAGAGGTAATAGGTAGAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTGGATCACCAAGTAGGGACATGAGAGGTAATAGGTAGAATACT  700

seq1  TTGAAAGAAAAAGCAGATCAGCAAGAAATAGAGAGATGAGAGGGTGGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAAAAAGCAGATCAGCAAGAAATAGAGAGATGAGAGGGTGGTGG  750

seq1  TTGTG  755
      |||||
seq2  TTGTG  755

seq1: chr14_13034896_13036036
seq2: B6Ng01-057B15.g_69_1188 (reverse)

seq1  AATCACTGATCTTCGTGAGAATACCCCCTCATGCTCAGAGTTAGTGAGGC  50
      ||||| ||||||| ||| |||||||||| || | ||||| || || ||||
seq2  AATCA-TGATCTT-GTG-GAATACCCCC-CACGTTCAGA-TTTGT-AGGC  44

seq1  GAGGTAAAATAAGTGATTATTAACTAGTCCTTGTCTGTGTGCAAGGTACA  100
      |||   |||||||    |||| ||| ||||||||| ||||||||||||||
seq2  GAG--TAAATAAG---GTATTTACT-GTCCTTGTCCGTGTGCAAGGTACA  88

seq1  GTGACGAATTAGAACCGTTCCATTTGGTGGTGCTGGGAGGCGACCAGAGA  150
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  GTGACGAATTAGAACCG-TCCATTTGGTGGTGCT-GGAGGCGACCAGAGA  136

seq1  GAAATGAAAAGGAAATGGTCTAAAACCAATCCGCTCTAGCACTTCTGAGC  200
      | |||||||| |||||||||||||  | |||||||||||||| |||||||
seq2  G-AATGAAAAAGAAATGGTCTAAA--CCATCCGCTCTAGCAC-TCTGAGC  182

seq1  CTCTCCAGTTACGTCTAGAGAGGCCCTGTGAGCTTTGACTGGCTAGTTCA  250
      |||||||| |||||||||||| | ||||||||| ||||||||||||||||
seq2  CTCTCCAG-TACGTCTAGAGAAG-CCTGTGAGC-TTGACTGGCTAGTTCA  229

seq1  GTACCAGTTCCCCTTGCCTCTGCTGGGTTTTGAATCTTGGGGTTTAAAAA  300
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTACCAGTTCCCCTTGCC-CTGCTGGGTTTTGAATCTTGGGGTTTAAAAA  278

seq1  AAAAAATGGAGTGAGTAACTGTCATATTTTAAGGATGCAATTGCTGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGGAGTGAGTAACTGTCATATTTTAAGGATGCAATTGCTGGTGG  328

seq1  GGGGAGGGGGGGCGGTGGTTGGAAACAGCCCACTTGAATAATTTTGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGGGGGCGGTGGTTGGAAACAGCCCACTTGAATAATTTTGAGTC  378

seq1  TCTGTCCAGAGGTGAAGCTGCAAACCAGTGTTTCATCTTCTCCAGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCAGAGGTGAAGCTGCAAACCAGTGTTTCATCTTCTCCAGATAAA  428

seq1  TCGTGAACAGTCTCC-AAAGATGGGGACATTGCATCTCTCAAAGGTTCTC  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCGTGAACAGTCTCCAAAAGATGGGGACATTGCATCTCTCAAAGGTTCTC  478

seq1  TAGACTGTGAAAATCATAGTGTGTCTTGTCCACTGGGCTTCCTGGAGAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTGAAAATCATAGTGTGTCTTGTCCACTGGGCTTCCTGGAGAGT  528

seq1  GGCTTTCCCAGAGTGGCTTGATTTTCTTTTTGGTTGTTTTGGTTTGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCCAGAGTGGCTTGATTTTCTTTTTGGTTGTTTTGGTTTGTTTT  578

seq1  GTTTGTTTTGTTTAATATCAGAACCTCTTTCCCAGCTCCTAAAATCACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTGTTTAATATCAGAACCTCTTTCCCAGCTCCTAAAATCACAA  628

seq1  AGCAGAAGGCTTCTTAAAGTACAGTGCTGGCTAATACACAGGGGTTAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGGCTTCTTAAAGTACAGTGCTGGCTAATACACAGGGGTTAGAG  678

seq1  GGATCAGAAGTTTAAAGGCTGGACATGGAGATGAGGCCAGAGGCCCAAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGAAGTTTAAAGGCTGGACATGGAGATGAGGCCAGAGGCCCAAGG  728

seq1  CCCTTGCCACAATCCTTTGGGGATGGACTCTGCTCCAATTAACTGCTGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCCACAATCCTTTGGGGATGGACTCTGCTCCAATTAACTGCTGAG  778

seq1  CTAAATGTGGACCGGTTGTTCATCTTAAATTGAGAACACAAATCTTGGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTGGACCGGTTGTTCATCTTAAATTGAGAACACAAATCTTGGCC  828

seq1  ACCTGAGCCCATGCGCTGAGGGACTAGTGGCCCCATTGTTTTGTGTCACG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGCCCATGCGCTGAGGGACTAGTGGCCCCATTGTTTTGTGTCACG  878

seq1  AATGGAGACTTCAGTGACTGCTGCTGATGTGGAACAGGGAAGTCCCTGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGACTTCAGTGACTGCTGCTGATGTGGAACAGGGAAGTCCCTGGA  928

seq1  AAGATACATCATGCTGCACAAGGACTGAGCGGTGGCAGGATCTGACCTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACATCATGCTGCACAAGGACTGAGCGGTGGCAGGATCTGACCTTG  978

seq1  GGGGAGCTGTGTGTTCGGTCTTGAATGTTAAAGAAACGTGTGTTTGTTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCTGTGTGTTCGGTCTTGAATGTTAAAGAAACGTGTGTTTGTTTG  1028

seq1  GTTAGTTTGGTTTGGTTTCTCAAGACGGGGTTTTTTGTTTTGTTTTTGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTTGGTTTGGTTTCTCAAGACGGGGTTTTTTGTTTTGTTTTTGTT  1078

seq1  TTTGTTTTTGTTTTCTGTGTAGCCCTGGTTCTCCTGGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGTTTTCTGTGTAGCCCTGGTTCTCCTGGAATTC  1120