BAC Information

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BAC

Clone NameB6Ng01-057K18
Chromosome14 (Build37)
Map Location 111,387,059 - 111,387,910
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491
Downstream geneLOC100043494, Slitrk5, LOC100043501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057K18.b
ACCDH879474
length1,002
definitionDH879474|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttctgatagaaggagacattgggatttatgtttctacagggg
tcattcggcatatcccataaacctcttgagggatatttccccaattataa
ctacaacatgactctcactgtgagccctaaaggctatatcatcttgtgat
gtcccctccaactgcatattttctggggatatcccctgattgtgttggag
aaaaatgaaatcgatgtaattttgctgggattatcttcctattctggata
ctgtatgaactcaggaatcatctttgcatgctaatatgcaaagtttgcat
ttgtgaaatattcaaatttacaaatgtgtcttccatgaatgatagaagtg
tgactaaaatatgtaaagctttctttcctgatatatctcatgcagtcatc
caattgcttggtcagtgagcccatgcccggcataagcgtctatgatgaaa
gactgagttcataattcttatttcacactcaacaggacagacgatacctt
gacattcattaaattcttagcctatcatcaacaaagacaactttgaatta
ttattatacaagaacccaatatgatacattgtcatcttaacaggaatttt
attccttaaaatttgacatctctgaatcatttacaaataaaatacaataa
aatttccttttccttatccatatatgaactcaaaggaattactattttgt
ttcttttatcacacactaatacattaaattatgtcaaagaaactatactt
gcttaatgaagactgtagggtgaagcagatatagagaccttgttttaaat
acagtaattagtcatgttaattaatactgcttaaattgaataaaattaag
tgaaagtgcacaactgcatctacctgtatcttttctgtatggaagaaata
tacatttgaagtaagcacagtttcttcaaaaatggtgctgttgagccagg
tacccattgttaaagggtgaatatttttctttatttctcaccctacgcaa
at
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111387059_111387910
seq2: B6Ng01-057K18.b_201_1046 (reverse)

seq1  ATTTGCGTAGGGTGAGAAATAAGGAAATAATTTCACCCTTCTACATATGG  50
      |||||||||||||||||||||| |||| |  |||||||||  ||| ||||
seq2  ATTTGCGTAGGGTGAGAAATAAAGAAAAATATTCACCCTTTAACA-ATGG  49

seq1  GTACCTGGCTC-ACAGCACCACTTTTTGATGAAACTGTGCTTACTTCAAA  99
      ||||||||||| ||||||||| ||||||| ||||||||||||||||||||
seq2  GTACCTGGCTCAACAGCACCA-TTTTTGAAGAAACTGTGCTTACTTCAAA  98

seq1  TGTATATTTCTTCCATTACAGAAAAGATACAGGTAGATGCAGTTGTGCAC  149
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTATATTTCTTCCA-TACAGAAAAGATACAGGTAGATGCAGTTGTGCAC  147

seq1  TTTCACTTAATTTTATTCAATTTAAGCAGTATTAATTAACATGACTAATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTAATTTTATTCAATTTAAGCAGTATTAATTAACATGACTAATT  197

seq1  ACTGTATTTAAAACAAGGTCTCTATATCTGCTTCACCCTACAGTCTTCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATTTAAAACAAGGTCTCTATATCTGCTTCACCCTACAGTCTTCAT  247

seq1  TAAGCAAGTATAGTTTCTTTGACATAATTTAATGTATTAGTGTGTGATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAGTATAGTTTCTTTGACATAATTTAATGTATTAGTGTGTGATAA  297

seq1  AAGAAACAAAATAGTAATTCCTTTGAGTTCATATATGGATAAGGAAAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAAATAGTAATTCCTTTGAGTTCATATATGGATAAGGAAAAGG  347

seq1  AAATTTTATTGTATTTTATTTGTAAATGATTCAGAGATGTCAAATTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATTGTATTTTATTTGTAAATGATTCAGAGATGTCAAATTTTAA  397

seq1  GGAATAAAATTCCTGTTAAGATGACAATGTATCATATTGGGTTCTTGTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAAATTCCTGTTAAGATGACAATGTATCATATTGGGTTCTTGTAT  447

seq1  AATAATAATTCAAAGTTGTCTTTGTTGATGATAGGCTAAGAATTTAATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATTCAAAGTTGTCTTTGTTGATGATAGGCTAAGAATTTAATGA  497

seq1  ATGTCAAGGTATCGTCTGTCCTGTTGAGTGTGAAATAAGAATTATGAACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAAGGTATCGTCTGTCCTGTTGAGTGTGAAATAAGAATTATGAACT  547

seq1  CAGTCTTTCATCATAGACGCTTATGCCGGGCATGGGCTCACTGACCAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTCATCATAGACGCTTATGCCGGGCATGGGCTCACTGACCAAGC  597

seq1  AATTGGATGACTGCATGAGATATCTCAGGAAAGAAAGCTTTACATATTTT  649
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATTGGATGACTGCATGAGATATATCAGGAAAGAAAGCTTTACATATTTT  647

seq1  AGTCACACTTCTCTCATTCATGGAAGACACATTTGTAAATTTGAATATTT  699
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTCACACTTCTATCATTCATGGAAGACACATTTGTAAATTTGAATATTT  697

seq1  CACAAATTCTATATTTTTATATTAGCATGCAAAGATGATTACTGAGTTCA  749
      ||||||| | |  |||  |||||||||||||||||||||| |||||||||
seq2  CACAAATGCAAACTTTGCATATTAGCATGCAAAGATGATTCCTGAGTTCA  747

seq1  TACAGTATCACTGAATAGGAAGATAATGCTTTAATAAATTACATCGATTT  799
      ||||||||| | ||||||||||||||| |    | |||||||||||||||
seq2  TACAGTATC-CAGAATAGGAAGATAATCCCAGCA-AAATTACATCGATTT  795

seq1  TATATTTTCTCCAACACAATCACTGGATAATTAGCAGAAAATATTATGTT  849
       || ||||||||||||||||||  |||| ||   ||||||||||   |||
seq2  CAT-TTTTCTCCAACACAATCAGGGGAT-ATCCCCAGAAAATATGCAGTT  843

seq1  GGA  852
      |||
seq2  GGA  846