BAC Information

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BAC

Clone NameB6Ng01-058A15
Chromosome14 (Build37)
Map Location 96,913,789 - 96,914,847
singlet/doubletsinglet
Overlap geneKlhl1
Upstream gene4921530L21Rik
Downstream geneLOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058A15.bB6Ng01-058A15.g
ACCDH879727DH879728
length1,2521,050
definitionDH879727|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A15, 5' end.DH879728|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtattaataattttgaggtcggtaactggccctatccttcaac
tggcggccatgtctatccactggatatggtctctaagccatttcccactt
gttgggtattttgactaatgtccttccttttgtgatctgggaacctcttg
tatccctggcatctgggactttctaggggctacccacagtccatcctcct
ccactgctacacaactaccctctgtaattctcccccatctcttcccatat
ctgaactagccccccctttccctccctctactctctccttcctagatccc
tctctccctctacttcccagagattattctctttcccttactgagtagga
ctatagaatccacactttggtgtgatcatctttctgcttgggtttcatat
ggtctgtaagttgtatccaagcttctttttatgtaatattcacttatcag
tgagtacataccatgtgtattcttttgtgattgggttactttactcagga
tgatattttcaagttccatccatttgcctgcgaatttcctgaagtcattg
tttttaatagctgagtagtactcaattgtgtaattatgccatatttttgt
atccatccctctgttgagggacatctgagttctttccaacttctggttat
tctaaataaggatactgaacaaagtgtagcatgtgtccttgttatatgct
ggggcatgttttgggtatatgtccaggagtggtatagctgtgtctcaagt
agcattatgtccaattttctgaagaactgccacactaatttctggagtag
ttgtaccggtttgcaatcctaccagcaatggaggagtaatattttctata
tttttaatttaaatatggtttaatattcccccatttcctcacaggaaata
ctgatgagtttgttttgttttgttttgtttgtttctttggtttttaatct
ctctctctgaaggtttatacataaaaccattctttgaacaacagcataag
aagaagtcctcttttgattgttgtcatactatcctcgaagactcctaaaa
taatacatctattttctgcgtttcttgcaaaatttgttcttttgacaaga
aaccctatattcgaacgactcgaacctggtggaacgattgaagatattcc
agaatcagattcttgtccaggcaatgaacgtgagtccaattctatcctta
tgtcccgccaaaacaatgtaattagagcaggttcctcgtgccacccccat
aa
gaattcttgtctatgtccttgctaaagacatggaaccaggtaaatatact
gttaataaagcagaaagaacaaacaggtaaaacatgtttttttttcctat
tgtcatttataaagctatgatatatgaaccatacaatgtcatgtaccata
taaatataaatgtgagaataaagtgttcttttttttgccttattacatag
ctgatagaattttggaaacatatatgaaatgtatggaatcatatatttta
aatatgtttggacataaatatatgtaaattagtgagtaggaaagaaatga
atcatcaacttattttgtaaagtatcttcaaggatataatcaagacattg
gaagcttgagacttgtttatcatggtataaagtagcaggtattgaagagg
gtgagatggcaccattttggtagaaagttggtttatgtctgtcaaggaat
ctttatgttgcaagtccatgaaaatttgatttttccagcattcaaaaatc
atgagtatctttcttctgaatgttctccacctgcagttttaaaaaacagg
cttaactaactgaagatccatagtcatgtaaacagtatttctatttagta
ccagagcaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaa
agaaaagaaaagaaaagaagaaaagaaaagaaaaagggaaggctcacctt
tgctttaaggttgagataattttatgcagtggagagttgatgagaaatat
gatatatattcaattcaatcaagtttttatagtttttagcatatatatat
atatatatatatatatgctgctttcatctgaatatcattcacaactatga
atagtacagagttttccaacatgttagatctatattccagattagatagg
ataaaagttgtaagttgaataaagttttttctaagtattttacttctgca
gttcctatggtgcctgggcgatgagccctatgcttattagaattagatat
attgagatgactaattgcttcatttactgggtgtctcatcattatgaaca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96913789_96914847
seq2: B6Ng01-058A15.g_69_1118

seq1  GAATTCTTGTCTATGTCCTTGCTAAAGACATGGAACCAGGTAAATATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTATGTCCTTGCTAAAGACATGGAACCAGGTAAATATACT  50

seq1  GTTAATAAAGCAGAAAGAACAAACAGGTAAAACATGTTTTTTTTTCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAAAGCAGAAAGAACAAACAGGTAAAACATGTTTTTTTTTCCTAT  100

seq1  TGTCATTTATAAAGCTATGATATATGAACCATACAATGTCATGTACCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTATAAAGCTATGATATATGAACCATACAATGTCATGTACCATA  150

seq1  TAAATATAAATGTGAGAATAAAGTGTTCTTTTTTTTGCCTTATTACATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAAATGTGAGAATAAAGTGTTCTTTTTTTTGCCTTATTACATAG  200

seq1  CTGATAGAATTTTGGAAACATATATGAAATGTATGGAATCATATATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGAATTTTGGAAACATATATGAAATGTATGGAATCATATATTTTA  250

seq1  AATATGTTTGGACATAAATATATGTAAATTAGTGAGTAGGAAAGAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTGGACATAAATATATGTAAATTAGTGAGTAGGAAAGAAATGA  300

seq1  ATCATCAACTTATTTTGTAAAGTATCTTCAAGGATATAATCAAGACATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAACTTATTTTGTAAAGTATCTTCAAGGATATAATCAAGACATTG  350

seq1  GAAGCTTGAGACTTGTTTATCATGGTATAAAGTAGCAGGTATTGAAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTGAGACTTGTTTATCATGGTATAAAGTAGCAGGTATTGAAGAGG  400

seq1  GTGAGATGGCACCATTTTGGTAGAAAGTTGGTTTATGTCTGTCAAGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATGGCACCATTTTGGTAGAAAGTTGGTTTATGTCTGTCAAGGAAT  450

seq1  CTTTATGTTGCAAGTCCATGAAAATTTGATTTTTCCAGCATTCAAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTTGCAAGTCCATGAAAATTTGATTTTTCCAGCATTCAAAAATC  500

seq1  ATGAGTATCTTTCTTCTGAATGTTCTCCACCTGCAGTTTTAAAAAACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTATCTTTCTTCTGAATGTTCTCCACCTGCAGTTTTAAAAAACAGG  550

seq1  CTTAACTAACTGAAGATCCATAGTCATGTAAACAGTATTTCTATTTAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTAACTGAAGATCCATAGTCATGTAAACAGTATTTCTATTTAGTA  600

seq1  CCAGAGCAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA  650

seq1  AGAAAAGAAAAGAAAAGAAGAAAAGAAAAGAAAAAGGGAAGGCTCACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAAAGAAGAAAAGAAAAGAAAAAGGGAAGGCTCACCTT  700

seq1  TGCTTTAAGGTTGAGATAATTTTATGCAGTGGAGAGTTGATGAGAAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAGGTTGAGATAATTTTATGCAGTGGAGAGTTGATGAGAAATAT  750

seq1  GATATATATTCAATTCAATCAAGTTTTTATAGTTTTTAGCATATATATAT  800
      ||||||||||||||||||||||||||||||||||||||||    ||||||
seq2  GATATATATTCAATTCAATCAAGTTTTTATAGTTTTTAGC----ATATAT  796

seq1  ATATATATATATATATATATGCTGC-TTCATCTGAATATCATTCACAACT  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATATATATATATATATATATGCTGCTTTCATCTGAATATCATTCACAACT  846

seq1  ATGAATAGTACAGAGTTTTCCAACATGTTAGATCTATATTCCAGATTAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAGTACAGAGTTTTCCAACATGTTAGATCTATATTCCAGATTAGA  896

seq1  TAGGAT-AAAGTTGTAAGTTGAAATAAAGTTTTTTCTAAGTATTTTAC-T  947
      |||||| |||||||||||||| |||||||||||||||||||||||||| |
seq2  TAGGATAAAAGTTGTAAGTTG-AATAAAGTTTTTTCTAAGTATTTTACTT  945

seq1  CTGCAGTTCCTATGGTGCCTGGGCGATGAGCCCTATGCTTATTAGAAATT  997
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CTGCAGTTCCTATGGTGCCTGGGCGATGAGCCCTATGCTTATTAGAA--T  993

seq1  AAGATATATTGAGAATGACTAATTGCTCCATTTACTGGGTGGTTCTCAAT  1047
       |||||||||||| ||||||||||||| |||||||||||||  |||| ||
seq2  TAGATATATTGAG-ATGACTAATTGCTTCATTTACTGGGTG--TCTC-AT  1039

seq1  CAGTCATGAACA  1059
      || | |||||||
seq2  CA-TTATGAACA  1050