BAC Information

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BAC

Clone NameB6Ng01-060I16
Chromosome14 (Build37)
Map Location 74,493,871 - 74,638,262
singlet/doubletdoublet
Overlap genenone
Upstream geneRcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
Downstream geneLOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060I16.bB6Ng01-060I16.g
ACCDH881489DH881490
length1,1191,103
definitionDH881489|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I16, 5' end.DH881490|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,493,871 - 74,495,009)(74,637,145 - 74,638,262)
sequence
gaattccactaattgcaacccagtggtgcatccgtggtcaggatggggtg
cgaaaatgtgtaatcactaatcaaagtactttcagttcattttcctgtta
cctggatcaggagagaatgatgacagactcactgcataagcacaacttta
caagaggtatgtaaattatttccaacaatcttctaaagttgaaaagattt
atgctagcttcctttagtgttgcaggatatttgatcacactgtgaaccct
gaggttgtgttatttactggaaaatcccgtttttagctatagtgtggctc
agccttagcacacacctataatccaagggctttctgcttggatgttgtaa
acagaattaaatagagtcaaccataggtcgaggcagaacaagcaaactct
tgacaagaagtaaacataggattattaggaaaaaagaaccatagagaata
agaggaagttggggaaaggatagagaaaattaaacactcaggaaatagac
aggatggacactcagtttgaaggaggtttgtgagatgacataaaagatgg
gattcctttggggacattgactgaggtggaaggtcaactgggtgctttct
ctgcctctctgagctggtggactttcagcctagcagctggctcctggttt
tctggtaaaatctaacagttgagattttgctaaaaaataaacaatcaaaa
acaaaacaaaacaaaaccagttcagtctatattttattttccaaaataag
acttgattcccttaaaaattataagtaggagatatatctgagagctcagc
tagcagacagcttcaaatgcaaacacattagcaaagctcttttcataaat
cagtacagatgtaattgtttaatcatgtgcagggaaagaaataacagaca
ggtgagtcatacctgctcggggattaatttctcaagaagatctaaatgtg
aaagtagaaactgatatattcagcagaaaaagatttgtatctgactcagg
caagaattcctttcagtagatgtcaaatttaatcagttaataagaggaat
actggatttggtaaatgtgaactcacatttcagtcaggctgttgctcttg
gaatcatagttcttattct
gaattcatagctatgagtgcttatattaagaaaaattactgaggtagggg
gctagaaaagtggtttagcagttaagagcactgttgttcttgtacaggac
ctgggcatggtttctagcacccaaatggtgacttacaatcaccccaaact
cctgttccaggagacctggtgccctcttcttgcctttgtgggaaccaggc
acatatgtggtgcacatacatacatgcaggcaaaagacatatatacatac
tataaaatgtaaaaatcagtatatactcctgacagtgtagagaagccact
taacaccatttacattgttgggaatgtaaatatattcagctattgtggag
aataatatgacaggttttggaaaatttaaaaacagaagtattttatgttc
caggaatcccactctggaatatattttgaaaggaaatgaaattgatataa
gcaaaagacacctgctccccccctttttaattgtagcactattcactgaa
gccaagaaatggaaataatcaggtttttcttcaaccaaggaatgggtagc
aagaatagactgcatatatggtggaagagaattcagcagcaaaaggagta
aaagctgtcatgtccatcaacatggttggaacgtgagcttgtcagagcac
agtcccagaaagaaattgtgtgacaattctgggtgcctgtgataacacac
acacacacacacacacacacacacacacacacacacacaaaacaaaaaca
gaaacaaaacaataaaacaagagtcttgtgatctcaggttcttcaaccac
agaattgttcttggactgtgttttcatgctcctctcatgtgcagcaggtg
ggagtgtgtttacttcagattactcattattgcttgttttagttattaat
tatttctccatggaaaaacacgttttaaccacatgtggctaatcttttct
aacattgagctatctctctaggctaagatttatttgtcttattttatgtg
tatgagtaattattggatgtgtgttatacatcatctggggtgcctggtgt
ctgtggaagtaaagaggcatcagatccctgcactgatcctgatggttgtg
agt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74493871_74495009
seq2: B6Ng01-060I16.b_45_1163

seq1  GAATTCCACTAATTGCAACCCAGTGGTGCATCCGTGGTCAGGATGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTAATTGCAACCCAGTGGTGCATCCGTGGTCAGGATGGGGTG  50

seq1  CGAAAATGTGTAATCACTAATCAAAGTACTTTCAGTTCATTTTCCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATGTGTAATCACTAATCAAAGTACTTTCAGTTCATTTTCCTGTTA  100

seq1  CCTGGATCAGGAGAGAATGATGACAGACTCACTGCATAAGCACAACTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATCAGGAGAGAATGATGACAGACTCACTGCATAAGCACAACTTTA  150

seq1  CAAGAGGTATGTAAATTATTTCCAACAATCTTCTAAAGTTGAAAAGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGTATGTAAATTATTTCCAACAATCTTCTAAAGTTGAAAAGATTT  200

seq1  ATGCTAGCTTCCTTTAGTGTTGCAGGATATTTGATCACACTGTGAACCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGCTTCCTTTAGTGTTGCAGGATATTTGATCACACTGTGAACCCT  250

seq1  GAGGTTGTGTTATTTACTGGAAAATCCCGTTTTTAGCTATAGTGTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTGTTATTTACTGGAAAATCCCGTTTTTAGCTATAGTGTGGCTC  300

seq1  AGCCTTAGCACACACCTATAATCCAAGGGCTTTCTGCTTGGATGTTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAGCACACACCTATAATCCAAGGGCTTTCTGCTTGGATGTTGTAA  350

seq1  ACAGAATTAAATAGAGTCAACCATAGGTCGAGGCAGAACAAGCAAACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTAAATAGAGTCAACCATAGGTCGAGGCAGAACAAGCAAACTCT  400

seq1  TGACAAGAAGTAAACATAGGATTATTAGGAAAAAAGAACCATAGAGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAAGTAAACATAGGATTATTAGGAAAAAAGAACCATAGAGAATA  450

seq1  AGAGGAAGTTGGGGAAAGGATAGAGAAAATTAAACACTCAGGAAATAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGTTGGGGAAAGGATAGAGAAAATTAAACACTCAGGAAATAGAC  500

seq1  AGGATGGACACTCAGTTTGAAGGAGGTTTGTGAGATGACATAAAAGATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGACACTCAGTTTGAAGGAGGTTTGTGAGATGACATAAAAGATGG  550

seq1  GATTCCTTTGGGGACATTGACTGAGGTGGAAGGTCAACTGGGTGCTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTTGGGGACATTGACTGAGGTGGAAGGTCAACTGGGTGCTTTCT  600

seq1  CTGCCTCTCTGAGCTGGTGGACTTTCAGCCTAGCAGCTGGCTCCTGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTCTGAGCTGGTGGACTTTCAGCCTAGCAGCTGGCTCCTGGTTT  650

seq1  TCTGGTAAAATCTAACAGTTGAGATTTTGCTAAAAAATAAACAATCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAAAATCTAACAGTTGAGATTTTGCTAAAAAATAAACAATCAAAA  700

seq1  ACAAAACAAAACAAAACCAGTTCAGTCTATATTTTATTTTCCAAAATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACCAGTTCAGTCTATATTTTATTTTCCAAAATAAG  750

seq1  ACTTGATTCCCTTAAAAATTACAAGTAGGAGATATATCTGAGAGCTCAGC  800
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTTGATTCCCTTAAAAATTATAAGTAGGAGATATATCTGAGAGCTCAGC  800

seq1  TAGCAGACAGCTTCAAATGCAAACACATTAGCAAAGC-CCTTTCATAAAC  849
      ||||||||||||||||||||||||||||||||||||| | ||||||||| 
seq2  TAGCAGACAGCTTCAAATGCAAACACATTAGCAAAGCTCTTTTCATAAAT  850

seq1  CAGTACAGATGTAATTGTTTAATCATGTGCAGGGAAAGAAAATAACAGAC  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGTACAGATGTAATTGTTTAATCATGTGCAGGGAAAG-AAATAACAGAC  899

seq1  AGGTGAGTCATACCTGCCCGGGGATTAATTTCTCAAAGAAGATCTAAATG  949
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  AGGTGAGTCATACCTGCTCGGGGATTAATTTCTC-AAGAAGATCTAAATG  948

seq1  TGAAAGTAGAAAACTGATAATATTCAGCAGAAAAGAATTTGTAATCTTGA  999
      ||||||||| |||||||| |||||||||||||||  |||||| ||| |||
seq2  TGAAAGTAG-AAACTGAT-ATATTCAGCAGAAAAAGATTTGT-ATC-TGA  994

seq1  CCCAGGCAAGAATTCCTTTTCAGGTAAGATGTCAAATTTTAATCAGTTTA  1049
      | |||||||||||||| ||||||   |||||||||| ||||||||||| |
seq2  CTCAGGCAAGAATTCC-TTTCAG--TAGATGTCAAA-TTTAATCAGTTAA  1040

seq1  TAAAGAAGGATATACTGGATTTTGTAAAATGTGAAAACTCAACATTTCAA  1099
      |||   |||| ||||||||||| || |||||||  ||||| ||||||| |
seq2  TAA--GAGGA-ATACTGGATTTGGT-AAATGTG--AACTC-ACATTTC-A  1082

seq1  GTTCAAGGCTGTTGCTCTGGAAATCATAGTTTCTTATTCT  1139
      ||   ||||||||||||| | |||||||| ||||||||||
seq2  GT--CAGGCTGTTGCTCTTGGAATCATAG-TTCTTATTCT  1119

seq1: chr14_74637145_74638262
seq2: B6Ng01-060I16.g_68_1170 (reverse)

seq1  ACTCACAACCATCTGTGGCTTCAGTTGCAGGGGATCTGATGCCCTCTTTA  50
      |||||||||||||    |  |||| |||| ||||||||||| ||||||| 
seq2  ACTCACAACCATC---AGGATCAG-TGCA-GGGATCTGATG-CCTCTTT-  43

seq1  ACCTCCACAGGCACCAGGCA-CACAGATGATGTATAAACACACATTCAAA  99
      || ||||||| ||||||||| | |||||||||||| ||||||||| ||| 
seq2  ACTTCCACAGACACCAGGCACCCCAGATGATGTAT-AACACACATCCAA-  91

seq1  TAAATTACTCATACACATAAAATAAGACAAATAAATCTTAGCCTAGAGAG  149
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TAATTACTCATACACATAAAATAAGACAAATAAATCTTAGCCTAGAGAG  140

seq1  ATAGCTCAATGGTTAAGAAAAGGATAAGCCACATGTGGTTAAAAACGTGT  199
      |||||||||||  | |||||| ||| |||||||||||||| |||||||||
seq2  ATAGCTCAATG--TTAGAAAA-GATTAGCCACATGTGGTT-AAAACGTGT  186

seq1  TTTTCCATGGAGAAATAATTGAATAACTAAAACAAGCAATAATGAGTAAT  249
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTCCATGGAGAAATAATT-AATAACTAAAACAAGCAATAATGAGTAAT  235

seq1  CTGAAGTAAACACACTCCCACCTGCTGCACATGAGAGGAGCATGAAAACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTAAACACACTCCCACCTGCTGCACATGAGAGGAGCATGAAAACA  285

seq1  CAGTCCAAGAACAATTCTGTGGTTTGAAGAACCTGAGGTCACAAGACTCT  349
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  CAGTCCAAGAACAATTCTGTGG-TTGAAGAACCTGAGATCACAAGACTCT  334

seq1  TGTTTTATTGTTTTGTTTCTGTTTTTGTTTTGTGTGTGTGTGTGTGTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATTGTTTTGTTTCTGTTTTTGTTTTGTGTGTGTGTGTGTGTGTG  384

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTTATCACAGGCACCCAGAATTGTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTTATCACAGGCACCCAGAATTGTCAC  434

seq1  ACAATTTCTTTCTGGGACTGTGCTCTGACAAGCTCACGTTCCAACCATGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCTTTCTGGGACTGTGCTCTGACAAGCTCACGTTCCAACCATGT  484

seq1  TGATGGACATGACAGCTTTTACTCCTTTTGCTGCTGAATTCTCTTCCACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGACATGACAGCTTTTACTCCTTTTGCTGCTGAATTCTCTTCCACC  534

seq1  ATATATGCAGTCTATTCTTGCTACCCATTCCTTGGTTGAAGAAAAACCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCAGTCTATTCTTGCTACCCATTCCTTGGTTGAAGAAAAACCTG  584

seq1  ATTATTTCCATTTCTTGGCTTCAGTGAATAGTGCTACAATTAAAAAGGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCCATTTCTTGGCTTCAGTGAATAGTGCTACAATTAAAAAGGGG  634

seq1  GGGAGCAGGTGTCTTTTGCTTATATCAATTTCATTTCCTTTCAAAATATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAGGTGTCTTTTGCTTATATCAATTTCATTTCCTTTCAAAATATA  684

seq1  TTCCAGAGTGGGATTCCTGGAACATAAAATACTTCTGTTTTTAAATTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGTGGGATTCCTGGAACATAAAATACTTCTGTTTTTAAATTTTC  734

seq1  CAAAACCTGTCATATTATTCTCCACAATAGCTGAATATATTTACATTCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTGTCATATTATTCTCCACAATAGCTGAATATATTTACATTCCC  784

seq1  AACAATGTAAATGGTGTTAAGTGGCTTCTCTACACTGTCAGGAGTATATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTAAATGGTGTTAAGTGGCTTCTCTACACTGTCAGGAGTATATA  834

seq1  CTGATTTTTACATTTTATAGTATGTATATATGTCTTTTGCCTGCATGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTTACATTTTATAGTATGTATATATGTCTTTTGCCTGCATGTAT  884

seq1  GTATGTGCACCACATATGTGCCTGGTTCCCACAAAGGCAAGAAGAGGGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGCACCACATATGTGCCTGGTTCCCACAAAGGCAAGAAGAGGGCA  934

seq1  CCAGGTCTCCTGGAACAGGAGTTTGGGGTGATTGTAAGTCACCATTTGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTCCTGGAACAGGAGTTTGGGGTGATTGTAAGTCACCATTTGGG  984

seq1  TGCTAGAAACCATGCCCAGGTCCTGTACAAGAACAACAGTGCTCTTAACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAACCATGCCCAGGTCCTGTACAAGAACAACAGTGCTCTTAACT  1034

seq1  GCTAAACCACTTTTCTAGCCCCCTACCTCAGTAATTTTTCTTAATATAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACCACTTTTCTAGCCCCCTACCTCAGTAATTTTTCTTAATATAAG  1084

seq1  CACTCATAGCTATGAATTC  1118
      |||||||||||||||||||
seq2  CACTCATAGCTATGAATTC  1103