BAC Information

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BAC

Clone NameB6Ng01-061E13
Chromosome14 (Build37)
Map Location 31,531,594 - 31,532,136
singlet/doubletsinglet
Overlap genenone
Upstream geneCacna2d3, EG665431, Selk, Actr8, Il17rb, Chdh, Cacna1d, LOC665399, Dcp1a, Tkt, Prkcd, EG665466, Rft1
Downstream geneSfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061E13.bB6Ng01-061E13.g
ACCDH882003DH882004
length583449
definitionDH882003|Mus musculus domesticus DNA, BAC clone: B6Ng01-061E13, 5' end.DH882004|Mus musculus domesticus DNA, BAC clone: B6Ng01-061E13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataatatgggtatactgctttaactacctttaaaatgacagttt
tttttttttttagtttactaatattttctttgtttgtttgtttgtttttt
gagacagggtttctctgtatagctctggctgtcctggaacttactctgta
gatcaggggctggcctcgaactcagaaatccacctgcctctgcctcccaa
gtgctgggattaaaggcatgcgccaccacacctggctttcttttcttttt
ttgtcttttatttatctaatttttacactccagattttatctccccccca
cccctcactccaactgttctacatcccatatgtcctccccacacccctgt
ttccaggaggatgtccccaacccccaaccaaccagacctctaaactccta
ggggcctccagtctcctgagggttaggtgcatcttctttgactgaaccca
gacctggcattccactgctgtatatgtgttgggggcctcatataagctgg
tgtatgctgcctggttggtggtccagtgtttgagagatcttgaaggtcca
ggttaattgagatgctggtcctcctcctccttc
ctgaaagctgtgtacaggtagagtgtgggctgactttgtcatagcaggcc
cttgagagcggcccttaggtgctgctaataccttttctcaatatgtcctt
gagaaagtagaagcactgatttattttattttattttttgttgattttta
tttactttccatctcggttgcagcttcccctccctcctttccttccagtc
cctccctctcagctcatccccaacccacacccatccacccctcctcccct
ttctcctcagaaaacaggaggcctcccgtggatatcaaccggtcttagca
caccaagctgcaggcttatcttcttcttgatcttagccattctgaaggag
ctggaatttcagagttgttttgatttgcatttccctgatgactaaggatg
ttgaaaatttctctctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_31531594_31532136
seq2: B6Ng01-061E13.b_43_585

seq1  GAATTCATAATATGGGTATACTGCTTTAACTACCTTTAAAATGACAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATATGGGTATACTGCTTTAACTACCTTTAAAATGACAGTTT  50

seq1  TTTTTTTTTTTAGTTTACTAATATTTTCTTTGTTTGTTTGTTTGTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAGTTTACTAATATTTTCTTTGTTTGTTTGTTTGTTTTTT  100

seq1  GAGACAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGAACTTACTCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGAACTTACTCTGTA  150

seq1  GATCAGGGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAA  200

seq1  GTGCTGGGATTAAAGGCATGCGCCACCACACCTGGCTTTCTTTTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGATTAAAGGCATGCGCCACCACACCTGGCTTTCTTTTCTTTTT  250

seq1  TTGTCTTTTATTTATCTAATTTTTACACTCCAGATTTTATCTCCCCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTATTTATCTAATTTTTACACTCCAGATTTTATCTCCCCCCCA  300

seq1  CCCCTCACTCCAACTGTTCTACATCCCATATGTCCTCCCCACACCCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCACTCCAACTGTTCTACATCCCATATGTCCTCCCCACACCCCTGT  350

seq1  TTCCAGGAGGATGTCCCCAACCCCCAACCAACCAGACCTCTAAACTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGAGGATGTCCCCAACCCCCAACCAACCAGACCTCTAAACTCCTA  400

seq1  GGGGCCTCCAGTCTCCTGAGGGTTAGGTGCATCTTCTTTGACTGAACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCCAGTCTCCTGAGGGTTAGGTGCATCTTCTTTGACTGAACCCA  450

seq1  GACCTGGCATTCCACTGCTGTATATGTGTTGGGGGCCTCATATAAGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGCATTCCACTGCTGTATATGTGTTGGGGGCCTCATATAAGCTGG  500

seq1  TGTATGCTGCCTGGTTGGTGGTCCAGTGTTTGAGAGATCTTGA  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTGCCTGGTTGGTGGTCCAGTGTTTGAGAGATCTTGA  543