BAC Information

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BAC

Clone NameB6Ng01-061P15
Chromosome14 (Build37)
Map Location 121,052,891 - 121,053,840
singlet/doubletsinglet
Overlap genenone
Upstream geneHs6st3, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a
Downstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061P15.bB6Ng01-061P15.g
ACCDH882506DH882507
length1,294946
definitionDH882506|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P15, 5' end.DH882507|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagactttcaaagaggtattgccaatacatctcaaactatt
ccacaaaatagaaacagaaggaacattgccaaactcattctgtgaggcca
cagttactctggtacttaccctggtacccacacaaagactccacaaagaa
agagaatttcagaccaatttcccttatgaagcccatatatgatgcaaaaa
tactcaataaaatactcacaaaccaaatacagaacacatcaaagatatca
tccaccacgatcaagtaggcttcatcctagggatggaggggtgattcaat
atatgaaaatacatcaacataaatataccatataaactgaaacaaaaaac
cccactattacccgcgctcgaccggccaggaaagacgcaacaagccagaa
tcttctgcggcaaaagctttattacttacatcttcaggagcaagagagag
aatggcaaaaccccatcccttttaaggagaattatcctccgcctaggacg
tgtcgctccctgattggctgcagcccattggccgagttgtcgtcatgggg
aaggcagagcacatggagtgaagaactacccttggcacatgcgcagatta
tttgtttaccacttagaacacaggatgtcagcgccatcttgtaacggcga
atgtgagggcggctccccacaccccacatgatcatctaattggatgcagt
ttgacaaaatcttctttcatgttaaaagtcttggagagatcagagattca
aagcatatatctaaacacaaaacaatatacagcaagccaacagccaaaat
caaattaaatggagagaaacataaagcaatttcactaaaatcagggacaa
gacaaggctgcccactctctctctatctattcaatagtacttgaagttct
aaccagagcaataagacaacaaaaagagatcgaagggatacaaattggaa
aggaagacatcaaagtatactatttgcagatgatatgtatacataggtga
cttcaaaattctaccagagagctcctacagctgataactttcagctaagt
gggctggatacaaaatactcctacaattcagtagcttttcccttaataca
aaggacaatgatgggaaagaaattgagaaatatgtgtcttccagaggccc
caataaataacatgtcttgaagtataccatcccagcaaggagacctgcat
acatgaattcaagttctgaaattaatggaaaactcgaatgaaagactttc
tgtactccattcgataatacagtagaagtgctctcctcctacga
gaattccaccgcacatggggttaaagaggtgatgtgtaggctcccaatgg
acactcaaatatccatctaattttcagcctacccccatcctgaggtgtcc
atagctctctatctgtttagctttcctgactcatccaaacctctcttgtg
agagacttttcttaaagtgtgtgttgaaattcatactataaaagtgccta
acctgacttgggaatctttgtagtgaacaattaattgcttcatcttgcat
ttgtatctgccatttggtgggcaccactgtgtaacaaactgttaacaaca
caggaatctaatgtaatatacatttatgaaatcgtgctgggtaggtcaga
agtttgggtggccttatttggtttctctgcctaggatttcacaagaaaaa
gctcaaaccaaaatgtggtgtgctggtcttttaactagaggctttggaga
aaaatttgttgccaagttcatttgggatgagacaggtgttgtggtctgca
agttacatccccacccaaagtcttgtgttgaaatcctgactcctgaggtg
atgtgttttaggggcttctttctttctttttgctttgataaaatagtgaa
aaggggcaactgttgtgtagacctttcctctgaattaaaacattctatct
ggtagagagatttgtaagacccagaaaataaacaaaagaggcaaagtgca
ggacaggcacactagtctccggaaggccttgaaacttaaaaaattcacaa
gggtcttttctcaaggttacatatctccctacatgtcaagctgcccgaga
gttgtaccagtcagctcaggaacacagattttatgactcgtccctgcact
gaggtgggggttttggtgaagtaaatgctttgatctattgtagttcctta
tctgaggttaatagacatggtcaccttcttcttaaagacgttacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121052891_121053840
seq2: B6Ng01-061P15.g_71_1016 (reverse)

seq1  GTGTGACGTCTTCTAAGAAG-AGGTGAACAATGGTCTATTAACCTCAGAT  49
      |||| ||||||| ||||||| |||||| ||   |||||||||||||||||
seq2  GTGTAACGTCTT-TAAGAAGAAGGTGACCA--TGTCTATTAACCTCAGAT  47

seq1  AAGGAACTAACAATAGATCAAAGCATTTACTTCACCAAAACCCCCACCTC  99
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACT-ACAATAGATCAAAGCATTTACTTCACCAAAACCCCCACCTC  96

seq1  AGTGCAGGGGACGAGTCATAAAATCTGTGTTCCTGGGCTGACTGGTACAA  149
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTGCA-GGGACGAGTCATAAAATCTGTGTTCCTGAGCTGACTGGTACAA  145

seq1  CTCTCGGGCAGCTTGACATGTAGGGAGATATGTAACCTTGAGAAAAGACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGGCAGCTTGACATGTAGGGAGATATGTAACCTTGAGAAAAGACC  195

seq1  CTTGTGAATTTTTTAAGTTTCAAGGCCTTCCGGAGACTAGTGTGCCTGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAATTTTTTAAGTTTCAAGGCCTTCCGGAGACTAGTGTGCCTGTC  245

seq1  CTGCACTTTGCCTCTTTTGTTTATTTTCTGGGTCTTACAAATCTCTCTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTTTGCCTCTTTTGTTTATTTTCTGGGTCTTACAAATCTCTCTAC  295

seq1  CAGATAGAATGTTTTAATTCAGAGGAAAGGTCTACACAACAGTTGCCCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGAATGTTTTAATTCAGAGGAAAGGTCTACACAACAGTTGCCCCT  345

seq1  TTTCACTATTTTATCAAAGCAAAAAGAAAGAAAGAAGCCCCTAAAACACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTATTTTATCAAAGCAAAAAGAAAGAAAGAAGCCCCTAAAACACA  395

seq1  TCACCTCAGGAGTCAGGATTTCAACACAAGACTTTGGGTGGGGATGTAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCAGGAGTCAGGATTTCAACACAAGACTTTGGGTGGGGATGTAAC  445

seq1  TTGCAGACCACAACACCTGTCTCATCCCAAATGAACTTGGCAACAAATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACCACAACACCTGTCTCATCCCAAATGAACTTGGCAACAAATTT  495

seq1  TTCTCCAAAGCCTCTAGTTAAAAGACCAGCACACCACATTTTGGTTTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAAAGCCTCTAGTTAAAAGACCAGCACACCACATTTTGGTTTGAG  545

seq1  CTTTTTCTTGTGAAATCCTAGGCAGAGAAACCAAATAAGGCCACCCAAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTGTGAAATCCTAGGCAGAGAAACCAAATAAGGCCACCCAAAC  595

seq1  TTCTGACCTACCCAGCACGATTTCATAAATGTATATTACATTAGATTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCTACCCAGCACGATTTCATAAATGTATATTACATTAGATTCCT  645

seq1  GTGTTGTTAACAGTTTGTTACACAGTGGTGCCCACCAAATGGCAGATACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTAACAGTTTGTTACACAGTGGTGCCCACCAAATGGCAGATACA  695

seq1  AATGCAAGATGAAGCAATTAATTGTTCACTACAAAGATTCCCAAGTCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAGATGAAGCAATTAATTGTTCACTACAAAGATTCCCAAGTCAGG  745

seq1  TTAGGCACTTTTATAGTATGAATTTCAACACACACTTTAAGAAAAGTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCACTTTTATAGTATGAATTTCAACACACACTTTAAGAAAAGTCTC  795

seq1  TCACAAGAGAGGTTTGGATGAGTCAGGAAAGCTAAACAGATAGAGAGCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAGAGGTTTGGATGAGTCAGGAAAGCTAAACAGATAGAGAGCTA  845

seq1  TGGACACCTCAGGATGGGGGTAGGCTGAAAATTAGATGGATATTTGAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCTCAGGATGGGGGTAGGCTGAAAATTAGATGGATATTTGAGTG  895

seq1  TCCATTGGGAGCCTACACATCACCTCTTTAACCCCATGTGCGGTGGAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGGAGCCTACACATCACCTCTTTAACCCCATGTGCGGTGGAATT  945

seq1  C  950
      |
seq2  C  946