BAC Information

Click to search

BAC

Clone NameB6Ng01-062I08
Chromosome14 (Build37)
Map Location 86,250,937 - 86,318,171
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062I08.bB6Ng01-062I08.g
ACCDH882891DH882892
length1,0991,121
definitionDH882891|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I08, 5' end.DH882892|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,250,937 - 86,252,042)(86,317,039 - 86,318,171)
sequence
gaattcttatatttatagaaggaaatagggatgcagaatatgctatgatg
gagtttcaaggaaaagaaattactaggaatcaaatgcactctgcatcttg
gagttactcctgtagatggttcatcatggatagaccaaagtgttaagaga
atcatcttaggatgattgagaacacattactgaaggaatttctgatataa
aggtaatcaaaggccactgtaacagattgttgtaaattctgggaccaaac
aaatctgagtttttttttttaaatgaaagtaatagagtagaaggaatctg
gtgccatatacataatgggctgcttttaaacgtttgctaaggggaaaact
ctgaaatagtcactccaacataccagactaacattgaacaaatagcacta
gtacaccagaaaagttaggctaggcatagaattcacaagaactgaaaagt
gggacatgaagaatccctaacaaaagcagcacaataacagatgaaaaagt
cactggaaactagagacacattttttttctttttaaatagattacaatac
ctagttttataattgtaaggcatgttttctggagttttctgagggaactt
ctttttagttttcaaaaactgagtattggcaaacactttgcaagtcatat
cttaataaacagcaaagatcaaccaatcaatacactatgaaatgacaaat
attagttattagtgttgagtatgaactatggtcacatgagaaggcagatg
gttttctgttctttgctgcatcgagtgctgaaaaaatgtcccagcattgc
tgttagactctaagtacaataagcctcagtataaacataaagaatccaaa
tattaaactgctcactacgctgaacagtgcatagcatcatgtgccttcat
cacaagaatattgacaacactttcttttgtgtttactcaaggtcatttca
ttgcccttgaataaattgtatctctgttttattttatttatgcctgtaca
gagcttgcatttgatattttgcattgttcaagacactgtccttttttttc
ttctcttctcctataatagagtgtataagaagaactggtgtttcttctt
gaattctctttcattgaaccaatctgtaaataattattaagtgcctacta
tgtacttgatactacactggatgctaggcaaacagctatccaggtgataa
aatacatgttcttacagatcatgctggctttagctacattatttaaaaca
tatttttaaaaggaatttttcatgctggctttagctacattatttaaaaa
cataattttactctataccaatataggctatacagtctgactcactaata
ggctatgtgagaatacccactttcataaaaaaaattttctcttttttcat
aaagctacagaataaaattatagtttaaagtcagatgtttaaatgaataa
ttttacatacttttggggcatatttaatatataatttaatgagatatcat
gcattttaacttaaatataatgaaaatcagtattttacagtttcatcttc
tcaaacatttgggcttctgggagctggcaaagggagggagatccagagtg
actccctaaaatccaccacactaacattgtgttaatatgggagaaggaaa
caaggaatgtagagagtggaaatggaagcaatggctttgtgaaagagacg
gaacgactctaaaacattgtaaatttcatgttgtcttcaccatggttttc
aatatgacttggtgttttgtatttctgaggtgctgtcatctgtacatttt
cttatgagatgccaatctactcaggagtgacttcacaggaaagtagttac
tttaggtttcatggctgttacgtaggatagggcttcatttgctttgaagg
catggcttcagggtgggtttattagaatattgagagagacaaggattaaa
ttacccaaggattctttctagagtcatggtggttataaggacctagagac
attttaaggaccccactccagctttatgtctctttattttggtgggaatg
agggaaaacccttctatggaaacaagtgagggtgatctctgaaattacaa
gagtgaaaggactatttgacacgtgtttgtctatgaaagacgacacattt
tgctcataaaccaatgcaggatttagtgacaatgccctattattcaggtg
tttgatagaaagaactacgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86250937_86252042
seq2: B6Ng01-062I08.b_37_1135

seq1  GAATTCTTATATTTATAGAAGGAAATAGGGATGCAGAATATGCTATGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATATTTATAGAAGGAAATAGGGATGCAGAATATGCTATGATG  50

seq1  GAGTTTCAAGGAAAAGAAATTACTAGGAATCAAATGCACTCTGCATCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAAGGAAAAGAAATTACTAGGAATCAAATGCACTCTGCATCTTG  100

seq1  GAGTTACTCCTGTAGATGGTTCATCATGGATAGACCAAAGTGTTAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACTCCTGTAGATGGTTCATCATGGATAGACCAAAGTGTTAAGAGA  150

seq1  ATCATCTTAGGATGATTGAGAACACATTACTGAAGGAATTTCTGATATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTAGGATGATTGAGAACACATTACTGAAGGAATTTCTGATATAA  200

seq1  AGGTAATCAAAGGCCACTGTAACAGATTGTTGTAAATTCTGGGACCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATCAAAGGCCACTGTAACAGATTGTTGTAAATTCTGGGACCAAAC  250

seq1  AAATCTGAGTTTTTTTTTTTAAATGAAAGTAATAGAGTAGAAGGAATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAGTTTTTTTTTTTAAATGAAAGTAATAGAGTAGAAGGAATCTG  300

seq1  GTGCCATATACATAATGGGCTGCTTTTAAACGTTTGCTAAGGGGAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATATACATAATGGGCTGCTTTTAAACGTTTGCTAAGGGGAAAACT  350

seq1  CTGAAATAGTCACTCCAACATACCAGACTAACATTGAACAAATAGCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAGTCACTCCAACATACCAGACTAACATTGAACAAATAGCACTA  400

seq1  GTACACCAGAAAAGTTAGGCTAGGCATAGAATTCACAAGAACTGAAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACCAGAAAAGTTAGGCTAGGCATAGAATTCACAAGAACTGAAAAGT  450

seq1  GGGACATGAAGAATCCCTAACAAAAGCAGCACAATAACAGATGAAAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATGAAGAATCCCTAACAAAAGCAGCACAATAACAGATGAAAAAGT  500

seq1  CACTGGAAACTAGAGACACATTTTTTTTCTTTTTAAATAGATTACAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAACTAGAGACACATTTTTTTTCTTTTTAAATAGATTACAATAC  550

seq1  CTAGTTTTATAATTGTAAGGCATGTTTTCTGGAGTTTTCTGAGGGAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTATAATTGTAAGGCATGTTTTCTGGAGTTTTCTGAGGGAACTT  600

seq1  CTTTTTAGTTTTCAAAAACTGAGTATTGGCAAACACTTTGCAAGTCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGTTTTCAAAAACTGAGTATTGGCAAACACTTTGCAAGTCATAT  650

seq1  CTTAATAAACAGCAAAGATCAACCAATCAATACACTATGAAATGACAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAAACAGCAAAGATCAACCAATCAATACACTATGAAATGACAAAT  700

seq1  ATTAGTTATTAGTGTTGAGTATGAACTATGGTCACATGAGAAGGCAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTATTAGTGTTGAGTATGAACTATGGTCACATGAGAAGGCAGATG  750

seq1  GTTTTCTGTTCTTTGCTGCATCGAGTGCTGAAAAAATGTCCCAGCATTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGTTCTTTGCTGCATCGAGTGCTGAAAAAATGTCCCAGCATTGC  800

seq1  TGTTAGACTCTAAGTACAATAAGCCTCAGTATAAACATAAAGAATCCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGACTCTAAGTACAATAAGCCTCAGTATAAACATAAAGAATCCAAA  850

seq1  TATTAAACTGCTCACTACGCTGAACAGTGCATAGCATCATGTGCCTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAACTGCTCACTACGCTGAACAGTGCATAGCATCATGTGCCTTCAT  900

seq1  CACAAGAATATTGACAACACTTTCTTTTGTGTTTACTCAAGGTCATTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAATATTGACAACACTTTCTTTTGTGTTTACTCAAGGTCATTTCA  950

seq1  TTGCCCTTGAATAAATTGTATCTCTGTTTTATTTTATTTATTGCCTGTAC  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGCCCTTGAATAAATTGTATCTCTGTTTTATTTTATTTA-TGCCTGTAC  999

seq1  AGAGCTTGCATTTGATATTTTGCATTGTTCAAGACAACTGTCCTTTTTTT  1050
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGCTTGCATTTGATATTTTGCATTGTTCAAGAC-ACTGTCCTTTTTTT  1048

seq1  TCTTCTCTTTCTCACTATAAATAGAAGTGTATAAGAAGAACTTGTGTTTT  1100
      ||||||| ||||| |||| ||||| ||||||||||||||||| ||| |||
seq2  TCTTCTC-TTCTC-CTAT-AATAG-AGTGTATAAGAAGAACTGGTG-TTT  1093

seq1  CTTCTT  1106
      ||||||
seq2  CTTCTT  1099

seq1: chr14_86317039_86318171
seq2: B6Ng01-062I08.g_69_1189 (reverse)

seq1  TCCGTAG-TCTTACTATTTAAACACCTTGGAATAAATAGGGCATTGTCCA  49
      ||||||| |||| ||| | ||||||||  |||| ||||||||||||||  
seq2  TCCGTAGTTCTTTCTA-TCAAACACCT--GAAT-AATAGGGCATTGTC--  44

seq1  ACTAAATCCTGCATTGGTTTATGAGCAAAATGTGTTCGTCTTTCATAAGA  99
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  ACTAAATCCTGCATTGGTTTATGAGCAAAATGTG-TCGTCTTTCAT-AGA  92

seq1  CAAACACGTTGTCAAATAGTTCCTTTCACTCTTGTTAATTTCAGAGATCA  149
      |||||||| |||||||||| |||||||||||||| |||||||||||||||
seq2  CAAACACG-TGTCAAATAG-TCCTTTCACTCTTG-TAATTTCAGAGATCA  139

seq1  CCCTCACCTTGTTTCCATAGAAGGGTTTTCCCTCATTCCCACCAAAATAA  199
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCA-CTTGTTTCCATAGAAGGGTTTTCCCTCATTCCCACCAAAATAA  188

seq1  AGAGACATAAAGCTGGAGTGGGGTCCTTAAAATGTCTCTAGGTCCTTATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATAAAGCTGGAGTGGGGTCCTTAAAATGTCTCTAGGTCCTTATA  238

seq1  ACCACCATGACTCTAGAAAGAATCCTTGGGTAATTTAATCCTTGGTCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCACCATGACTCTAGAAAGAATCCTTGGGTAATTTAATCCTT-GTCTCT  287

seq1  CTCAATATTCTAATAAACCCACCCTGAAGCCATGCCTTCAAAGCAAATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATATTCTAATAAACCCACCCTGAAGCCATGCCTTCAAAGCAAATGA  337

seq1  AGCCCTATCCTACGTAACAGCCATGAAACCTAAAGTAACTACTTTCCTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTATCCTACGTAACAGCCATGAAACCTAAAGTAACTACTTTCCTGT  387

seq1  GAAGTCACTCCTGAGTAGATTGGCATCTCATAAGAAAATGTACAGATGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCACTCCTGAGTAGATTGGCATCTCATAAGAAAATGTACAGATGAC  437

seq1  AGCACCTCAGAAATACAAAACACCAAGTCATATTGAAAACCATGGTGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTCAGAAATACAAAACACCAAGTCATATTGAAAACCATGGTGAAG  487

seq1  ACAACATGAAATTTACAATGTTTTAGAGTCGTTCCGTCTCTTTCACAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGAAATTTACAATGTTTTAGAGTCGTTCCGTCTCTTTCACAAAG  537

seq1  CCATTGCTTCCATTTCCACTCTCTACATTCCTTGTTTCCTTCTCCCATAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTTCCATTTCCACTCTCTACATTCCTTGTTTCCTTCTCCCATAT  587

seq1  TAACACAATGTTAGTGTGGTGGATTTTAGGGAGTCACTCTGGATCTCCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAATGTTAGTGTGGTGGATTTTAGGGAGTCACTCTGGATCTCCCT  637

seq1  CCCTTTGCCAGCTCCCAGAAGCCCAAATGTTTGAGAAGATGAAACTGTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCCAGCTCCCAGAAGCCCAAATGTTTGAGAAGATGAAACTGTAA  687

seq1  AATACTGATTTTCATTATATTTAAGTTAAAATGCATGATATCTCATTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGATTTTCATTATATTTAAGTTAAAATGCATGATATCTCATTAAA  737

seq1  TTATATATTAAATATGCCCCAAAAGTATGTAAAATTATTCATTTAAACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTAAATATGCCCCAAAAGTATGTAAAATTATTCATTTAAACAT  787

seq1  CTGACTTTAAACTATAATTTTATTCTGTAGCTTTATGAAAAAAGAGAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTTAAACTATAATTTTATTCTGTAGCTTTATGAAAAAAGAGAAAA  837

seq1  TTTTTTTTATGAAAGTGGGTATTCTCACATAGCCTATTAGTGAGTCAGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATGAAAGTGGGTATTCTCACATAGCCTATTAGTGAGTCAGAC  887

seq1  TGTATAGCCTATATTGGTATAGAGTAAAATTATGTTTTTAAATAATGTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCCTATATTGGTATAGAGTAAAATTATGTTTTTAAATAATGTAG  937

seq1  CTAAAGCCAGCATGAAAAATTCCTTTTAAAAATATGTTTTAAATAATGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCCAGCATGAAAAATTCCTTTTAAAAATATGTTTTAAATAATGTA  987

seq1  GCTAAAGCCAGCATGATCTGTAAGAACATGTATTTTATCACCTGGATAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGCCAGCATGATCTGTAAGAACATGTATTTTATCACCTGGATAGC  1037

seq1  TGTTTGCCTAGCATCCAGTGTAGTATCAAGTACATAGTAGGCACTTAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCCTAGCATCCAGTGTAGTATCAAGTACATAGTAGGCACTTAATA  1087

seq1  ATTATTTACAGATTGGTTCAATGAAAGAGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  ATTATTTACAGATTGGTTCAATGAAAGAGAATTC  1121