BAC Information

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BAC

Clone NameB6Ng01-062I10
Chromosome14 (Build37)
Map Location 8,237,721 - 8,384,523
singlet/doubletdoublet
Overlap geneLOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874
Upstream geneLOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947
Downstream geneLOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062I10.bB6Ng01-062I10.g
ACCDH882895DH882896
length1,1481,097
definitionDH882895|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I10, 5' end.DH882896|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,237,721 - 8,238,898)(8,383,413 - 8,384,523)
sequence
gaattctctaccgacttggtggggggggttctcagtagagcaatcctttt
agcacagagacagcctctcttgtgcgtcagttattccctttagcgaggga
aaacacggggtgaaatggacttcaaaagtccttctggccctataatatga
aattctgtaactactagtacacactgccgagaacgttctaagaaacaata
gcatcaaatggccttggtcggagatccagatcagtgcctagagtacagaa
agcctatacacggccaaaaccaaaataatgtccttttagtgacctttgtc
ttagtctgactatttggtcacagacaagtcaagacaaagacccctagtaa
aaggcctaacacagttcagacttttccttttaatgtaaagaagacagagg
gcacaagctgggaccaaaatgtgattatgattctaatgttctcttcccca
cactctatatagtgaaaggtcactttggcacctatcctgtatttcaacct
acacattaaactttcaggttttatattgcaacatttcccagaatccagtc
aagggtgactgaagtgaaaggtggtctaaggcccatgcctatttggggaa
gaggacgggttttatttcttactctttgaaaggatgctgattgcttaaag
acacattgcacaccttcacatccaggagccaggcaattaatttctcaaag
tgcaggcatctgttacttatgaaaacatagccttgcaggctgctctgatc
aacacagaattcagtagccagctcctaaggcctgtagctttgaaaagcaa
agccagtctaagctggttcctgctaagtaaatgactgcaactcaacagca
tctgcagctgtagaggaaacccaggatggctgaaaatactgtgtaggcaa
agaaggaaagctgcctcatttctcactaaaggcagctcaggggaaagcct
ggtggagcccattgcttctgagaactttcaggatccccatttaaatagta
tctgacctactaactgcttctcctagtaagtgttcacatggttctctgac
taggacatcacttgcctttctttgttcagttgttctttgttgagggagtc
cctagccacctcagccaatctgactgcattttgccagctccagcatca
gaattcactgtctttatcttttctctccctccatcttcttcttgggactc
agaatggtctcccctgcccctgggccatcaagtatgcaaattcttttgtg
tttacctatctgcagggtctgctagaaatacttcaacccaaaattccaaa
atgactaagaagagatcaaaaataaatgaactagaagaactgaaattgga
tatgaggaagatcagcaatgacatggaggaaatgtgtggaatcctgaacc
tttacatgtatgaggatttgaactacaggtaggaattatgcccagtaccc
tgttgcctgtattgtgccatctgttaacccaatttccttccatgaatgga
gtgcgtcatctcccatcattcaattaagtagccctgacaggtgtttaatt
gttggataaacaaggtgctgtgtgtttattatcatcttcttttgtacttg
accttggggtttttgcattctgattgttgctgtgaacagctagaatgtcc
tgctcacacttactgtctctcagtgtgtgaatgcaatgcctgcaggcttc
aaggctttactctgatattgttcattatattctgagagatggcacctgtc
tggatttatttggcattctaattgtgtctgtgtgtgtgaacatagttgcg
tgtgttttgttcaggactggggctctgggacctttgatggggtctgagga
tttgtgtgatgcacagtttgcaggtcctgttagtgttgagtccatagagg
tccaaagtgatcaccagggaagtttgctcctggtgtttccttgttgtcac
acaggaatctcctggaggagatgtgataaagcctttctcctgtaaatact
agttgtgtcctctgggaattcacataacaacagaaaccaagaaatgataa
atccctgccttaaaaataagtggaaagtcattacagatatctactggact
cttgcctgtggcacagtgtagtgtaaattgtcatagagtactctattcct
acatgcttgcccggaagccttgaaggtcagctagctcatttgtctctgct
ctgctgtcttctgccagatagtaagttatagcacctaggaaccagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8237721_8238898
seq2: B6Ng01-062I10.b_50_1197

seq1  GAATTCTCTACCGACTTGGTGGGGGGGGTTCTCAGTAGAGCAATCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACCGACTTGGTGGGGGGGGTTCTCAGTAGAGCAATCCTTTT  50

seq1  AGCACAGAGACAGCCTCTCTTGTGCGTCAGTTATTCCCTTTAGCGAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGACAGCCTCTCTTGTGCGTCAGTTATTCCCTTTAGCGAGGGA  100

seq1  AAACACGGGGTGAAATGGACTTCAAAAGTCCTTCTGGCCCTATAATATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGGGGTGAAATGGACTTCAAAAGTCCTTCTGGCCCTATAATATGA  150

seq1  AATTCTGTAACTACTAGTACACACTGCCGAGAACGTTCTAAGAAACAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTAACTACTAGTACACACTGCCGAGAACGTTCTAAGAAACAATA  200

seq1  GCATCAAATGGCCTTGGTCGGAGATCCAGATCAGTGCCTAGAGTACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAATGGCCTTGGTCGGAGATCCAGATCAGTGCCTAGAGTACAGAA  250

seq1  AGCCTATACACGGCCAAAACCAAAATAATGTCCTTTTAGTGACCTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATACACGGCCAAAACCAAAATAATGTCCTTTTAGTGACCTTTGTC  300

seq1  TTAGTCTGACTATTTGGTCACAGACAAGTCAAGACAAAGACCCCTAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTGACTATTTGGTCACAGACAAGTCAAGACAAAGACCCCTAGTAA  350

seq1  AAGGCCTAACACAGTTCAGACTTTTCCTTTTAATGTAAAGAAGACAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTAACACAGTTCAGACTTTTCCTTTTAATGTAAAGAAGACAGAGG  400

seq1  GCACAAGCTGGGACCAAAATGTGATTATGATTCTAATGTTCTCTTCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGCTGGGACCAAAATGTGATTATGATTCTAATGTTCTCTTCCCCA  450

seq1  CACTCTATATAGTGAAAGGTCACTTTGGCACCTATCCTGTATTTCAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTATATAGTGAAAGGTCACTTTGGCACCTATCCTGTATTTCAACCT  500

seq1  ACACATTAAACTTTCAGGTTTTATATTGCAACATTTCCCAGAATCCAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTAAACTTTCAGGTTTTATATTGCAACATTTCCCAGAATCCAGTC  550

seq1  AAGGGTGACTGAAGTGAAAGGTGGTCTAAGGCCCATGCCTATTTGGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGACTGAAGTGAAAGGTGGTCTAAGGCCCATGCCTATTTGGGGAA  600

seq1  GAGGACGGGTTTTATTTCTTACTCTTTGAAAGGATGCTGATTGCTTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACGGGTTTTATTTCTTACTCTTTGAAAGGATGCTGATTGCTTAAAG  650

seq1  ACACATTGCACACCTTCACATCCAGGAGCCAGGCAATTAATTTCTCAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTGCACACCTTCACATCCAGGAGCCAGGCAATTAATTTCTCAAAG  700

seq1  TGCAGGCATCTGTTACTTATGAAAACATAGCCTTGCAGGCTGCTCTGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCATCTGTTACTTATGAAAACATAGCCTTGCAGGCTGCTCTGATC  750

seq1  AACACAGAATTCAGTAGCCAGCTCCTAAGGCCTGTAGCTTTGAAAAGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAATTCAGTAGCCAGCTCCTAAGGCCTGTAGCTTTGAAAAGCAA  800

seq1  AGCCAGTCTAAGCTGGTTCCTGCTAAGTAAATGACTGCAACTCAACAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTCTAAGCTGGTTCCTGCTAAGTAAATGACTGCAACTCAACAGCA  850

seq1  TCTGCAGCTGTAGAGGAAACCCAGGATGGCTGAAAATACTGTGTAGGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCTGTAGAGGAAACCCAGGATGGCTGAAAATACTGTGTAGGCAA  900

seq1  AGAAAGGAAAGCTGCCTCATTTCCCACTAAAGGCAGCTCAGGGGAAAAGC  950
      || |||||||||||||||||||| |||||||||||||||||||| |||||
seq2  AG-AAGGAAAGCTGCCTCATTTCTCACTAAAGGCAGCTCAGGGG-AAAGC  948

seq1  CTGGTGGAAGCCCATTGCTTCTGAGAAACTTTCAAGGAATCCCCAATTTA  1000
      ||||||| ||||||||||||||||| ||||||||  | |||||||  || 
seq2  CTGGTGG-AGCCCATTGCTTCTGAG-AACTTTCA--GGATCCCCA--TTT  992

seq1  AAATAGTATCTGACCTACTAACTGCTTCTCCTAGTTAAAAGTGTTCACAA  1050
      |||||||||||||||||||||||||||||||||||   |||||||||| |
seq2  AAATAGTATCTGACCTACTAACTGCTTCTCCTAGT---AAGTGTTCAC-A  1038

seq1  TGGTTCTCTGACCTAAGGGACATCCACTTGCCTTTTCTTTGTTCAGTTTG  1100
      ||||||||||| |||  |||||| |||||||| |||||||||||||||  
seq2  TGGTTCTCTGA-CTA--GGACAT-CACTTGCC-TTTCTTTGTTCAGTT--  1081

seq1  TTTCTTTGTTTTGAGGGAGTCCCCTAGCACACCTCAGGCCCAATCTGACT  1150
       |||||||  |||||||||| ||||||| ||||||||  |||||||||||
seq2  GTTCTTTG--TTGAGGGAGT-CCCTAGC-CACCTCAG--CCAATCTGACT  1125

seq1  TGGCATTTATGGCAGGTCTCCAGCATCA  1178
        |||||| || |||  |||||||||||
seq2  --GCATTT-TGCCAG--CTCCAGCATCA  1148

seq1: chr14_8383413_8384523
seq2: B6Ng01-062I10.g_67_1163 (reverse)

seq1  AACTGGGTCCCCTAGGTGCTAATTAAACTTACTATCCTGGGCAGAGGACA  50
      |||||| |  |||||||||||    |||||||||||   |||||| ||||
seq2  AACTGGTT--CCTAGGTGCTA---TAACTTACTATC--TGGCAGAAGACA  43

seq1  GCAGAGCCAGGAGACCAAATGGAGCTAGCTGACCTTCAAGGGCTTCCCGG  100
      |||||||   |||| ||||| |||||||||||||||||| ||||| ||||
seq2  GCAGAGC--AGAGA-CAAAT-GAGCTAGCTGACCTTCAA-GGCTT-CCGG  87

seq1  GCAAGCATGTAGGAATAGAGTACTTCTATGACAATTTTACACTACACTGT  150
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  GCAAGCATGTAGGAATAGAGTAC-TCTATGACAA-TTTACACTACACTGT  135

seq1  GCCACAGGCAAGGGTCCAGTAGATATCTGTAATGACTTTCCACTTATTTT  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCCACAGGCAAGAGTCCAGTAGATATCTGTAATGACTTTCCACTTATTTT  185

seq1  TAAGGCAGGGA-TTATCATTTCTTGGTTTCTGTTGTTATGTGAATTCCCA  249
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGGGATTTATCATTTCTTGGTTTCTGTTGTTATGTGAATTCCCA  235

seq1  GAGGACACAACTAGTATTTACAGGAGAAAGGCTTTATCACATCTCCTCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACAACTAGTATTTACAGGAGAAAGGCTTTATCACATCTCCTCCA  285

seq1  GGAGATTCCTGTGTGACAACAAGGAAACACCAGGAGCAAACTTCCCTGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTCCTGTGTGACAACAAGGAAACACCAGGAGCAAACTTCCCTGGT  335

seq1  GATCACTTTGGACCTCTATGGACTCAACACTAACAGGACCTGCAAACTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTTGGACCTCTATGGACTCAACACTAACAGGACCTGCAAACTGT  385

seq1  GCATCACACAAATCCTCAGACCCCATCAAAGGTCCCAGAGCCCCAGTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACACAAATCCTCAGACCCCATCAAAGGTCCCAGAGCCCCAGTCCT  435

seq1  GAACAAAACACACGCAACTATGTTCACACACACAGACACAATTAGAATGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAACACACGCAACTATGTTCACACACACAGACACAATTAGAATGC  485

seq1  CAAATAAATCCAGACAGGTGCCATCTCTCAGAATATAATGAACAATATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATCCAGACAGGTGCCATCTCTCAGAATATAATGAACAATATCA  535

seq1  GAGTAAAGCCTTGAAGCCTGCAGGCATTGCATTCACACACTGAGAGACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGCCTTGAAGCCTGCAGGCATTGCATTCACACACTGAGAGACAG  585

seq1  TAAGTGTGAGCAGGACATTCTAGCTGTTCACAGCAACAATCAGAATGCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGAGCAGGACATTCTAGCTGTTCACAGCAACAATCAGAATGCAA  635

seq1  AAACCCCAAGGTCAAGTACAAAAGAAGATGATAATAAACACACAGCACCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCAAGGTCAAGTACAAAAGAAGATGATAATAAACACACAGCACCT  685

seq1  TGTTTATCCAACAATTAAACACCTGTCAGGGCTACTTAATTGAATGATGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCCAACAATTAAACACCTGTCAGGGCTACTTAATTGAATGATGG  735

seq1  GAGATGACGCACTCCATTCATGGAAGGAAATTGGGTTAACAGATGGCACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGACGCACTCCATTCATGGAAGGAAATTGGGTTAACAGATGGCACA  785

seq1  ATACAGGCAACAGGGTACTGGGCATAATTCCTACCTGTAGTTCAAATCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGCAACAGGGTACTGGGCATAATTCCTACCTGTAGTTCAAATCCT  835

seq1  CATACATGTAAAGGTTCAGGATTCCACACATTTCCTCCATGTCATTGCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTAAAGGTTCAGGATTCCACACATTTCCTCCATGTCATTGCTG  885

seq1  ATCTTCCTCATATCCAATTTCAGTTCTTCTAGTTCATTTATTTTTGATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTCATATCCAATTTCAGTTCTTCTAGTTCATTTATTTTTGATCT  935

seq1  CTTCTTAGTCATTTTGGAATTTTGGGTTGAAGTATTTCTAGCAGACCCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGTCATTTTGGAATTTTGGGTTGAAGTATTTCTAGCAGACCCTG  985

seq1  CAGATAGGTAAACACAAAAGAATTTGCATACTTGATGGCCCAGGGGCAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGGTAAACACAAAAGAATTTGCATACTTGATGGCCCAGGGGCAGG  1035

seq1  GGAGACCATTCTGAGTCCCAAGAAGAAGATGGAGGGAGAGAAAAGATAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCATTCTGAGTCCCAAGAAGAAGATGGAGGGAGAGAAAAGATAAA  1085

seq1  GACAGTGAATTC  1111
      ||||||||||||
seq2  GACAGTGAATTC  1097