BAC Information

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BAC

Clone NameB6Ng01-062O11
Chromosome14 (Build37)
Map Location 7,422,370 - 7,509,518
singlet/doubletdoublet
Overlap geneLOC100042024, LOC100041664, LOC100042077
Upstream geneLOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906
Downstream geneLOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062O11.bB6Ng01-062O11.g
ACCDH883157DH883158
length1,0671,054
definitionDH883157|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O11, 5' end.DH883158|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,422,370 - 7,423,458)(7,508,462 - 7,509,518)
sequence
gaattcctaaaagagcagaaaagctatcttccagctggtttgctaagcta
tgttcctcttcctaaccaccattgtcagacatatgccacactccctgtta
caggcccggttgccttgaaatgtataagctgcctcagacataaagatatg
gggaacattgtcaggtcatatcagatgggacgcagggaaatcctgaagtt
catagtgcttagcactatcaagcactaattaatcgtgtgtcttcaaatcc
aaagtgtctgagtcctcaccacatgacatgaccaggggagcatccttctc
tgttcttttcatcagagactcaagttacctacagtaatctggaagatgaa
gtgcttcaactcccttccatgaaaggacacactgttattctcatagtgcc
cactcctgacattttttgccactcaaaatgaaattaaatagctcccagaa
aagtagctgcaggtttgtcaattcctggctctgtcaaactaatcatcaga
aattcttgactctttttctgatgttgacaaagtccaaggcttcagcttgt
aagacctactcctggaaggcccagctcaagcctacctctaccaggaagtt
ccccaactctgcccaggactcactgtgccttctccagaatgatttccttc
ttcctttttcatgagaaaggattccctcttccttctctgttggtctggtc
tctccttcatcgccattctctttctgaaatagcctgagcagccaggaaaa
cattcctgctggtgatctcagagcaaacagaagtgatgaaccacaggcag
ttgctgtcaccacaacacaggtgacaacacagaagattctagttctatcc
tagatacaagagattctccaaggaaggcattactgatgatgtcactagca
actgccatgacctacctgtaactagttctgcccagcttgtccttttctgg
ggtgctctctgagctctcatggaccgtgggatccctttggcacctctctt
caagctgagatctactgcttcatagatgtcatggtgctttgaggaaactg
gtaggactctgactgct
gaattcaccattggaaaatcactaacagcactgtgaaggtttctaaggtg
ggcagcaggaagcctgtccttttcctaccctctccctcagcccctcttcc
cccacctgtgtaggattttgaggtcgaatgtgcattgtgcactgctgctg
caaggtagctcttccctgtggctgtgctgaagcagctggccagggaagcc
tgggagctgaggctccagcctgtggattctctttcctcagactttagtct
gtaccagggagtggtgttctctcctgtgggtgtgtgtatatatattcttt
actttatattttgttcacgtagttcggtgcattcttccaggcattctgga
tgggcgctttagaatcactctttctgaaccaaaagctctcagagcagagc
tgaacctcccagaaaatgctcttctctaccaaatcgccagatgggggtgg
gcccgaagctaaacagcactgtagaggtggcataatggaccagaaccccc
aggcagaggtgggaggtaagttcctagcagtggtgctgattgagggtcag
taagacccagttcttctcctgtgcagagggaacttttacttagctggaat
tgaacctcgtggtccgagtatgtgaagggattcagggtccagagtgcacc
ccagaacataggagatagctctatgtccccatttccctcaggagccttct
cctcactcctgctgcctagaacaaggggaggagaatctccactgcctgac
ctgctgcttcatgcccctccctatctctactctccattccctctgagccc
tccagaccctagaggagtaagaggggaggtcttttcgaggcttatctcga
tttccatcctctcattccggtgctggtcatatcctgggtcagcaaccaca
gaacatcccaaggctgggtgctcagtggtgagtgtgcagaggaccaaaga
gatataggcaggggcgacttgtgattcagagttctgggttcaggttgctt
gcatggagggataagggaagatggtgctagcaggtgtagggtcaaatttc
gggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7422370_7423458
seq2: B6Ng01-062O11.b_50_1116

seq1  GAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCTA  50

seq1  TGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTTA  100

seq1  CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACATAAAGATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACATAAAGATATG  150

seq1  GGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAGTT  200

seq1  CATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAATCC  250

seq1  AAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAGCATCCTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAGCATCCTTCTC  300

seq1  TGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATGAA  350

seq1  GTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTGCC  400

seq1  CACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAATAGCTCCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAATAGCTCCCAGAA  450

seq1  AAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAGA  500

seq1  AATTCTTGACTCTTTTTCTGATGTTGACAAAGTCCAAGGCTTCAGCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGACTCTTTTTCTGATGTTGACAAAGTCCAAGGCTTCAGCTTGT  550

seq1  AAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTT  600

seq1  CCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCAGAATGATTTCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCAGAATGATTTCCTTC  650

seq1  TTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGGTC  700

seq1  TCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAAAA  750

seq1  CATTCCTGCTGGTGATCTCAGAGCAAACAGAAGTGATGAACCACAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGCTGGTGATCTCAGAGCAAACAGAAGTGATGAACCACAGGCAG  800

seq1  TTGCTGTCACCACAACACAGGTGACAACACAGAAGATTCTAGTTCTATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTCACCACAACACAGGTGACAACACAGAAGATTCTAGTTCTATCC  850

seq1  TAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCA  900

seq1  ACTGCCATGACCTACCTGTTAACTAGTTCTGCCCAGCTTGGTCCTTTTCT  950
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  ACTGCCATGACCTACCTG-TAACTAGTTCTGCCCAGCTT-GTCCTTTTCT  948

seq1  GGGGTGCCTCTCCTGGAGCCTCTCATGGACCCGTGGGATCCCCTTTGGCA  1000
      |||||| |||||   ||| |||||||||| ||||||||| ||||||||| 
seq2  GGGGTG-CTCTC--TGAG-CTCTCATGGA-CCGTGGGAT-CCCTTTGGC-  991

seq1  ACCTCTCCTTCCAAAGCTGGAGAATTCTACTGCTTCATTAGATGTCAT-G  1049
      |||||| ||||  ||||| ||||  |||||||||||| |||||||||| |
seq2  ACCTCT-CTTC--AAGCT-GAGA--TCTACTGCTTCA-TAGATGTCATGG  1034

seq1  TGCTTTTGAGGGGAAACATTGGTTAGGACTCTGACATGCT  1089
      ||||||   | ||||||  ||| |||||||||||| ||||
seq2  TGCTTT---GAGGAAAC--TGG-TAGGACTCTGAC-TGCT  1067

seq1: chr14_7508462_7509518
seq2: B6Ng01-062O11.g_68_1121 (reverse)

seq1  GCCCGAAAGTCTGAGCCCTGCACCTGGCTAGCACCATCTTCCCTTATCCC  50
      |||||||| | ||| |||| ||||| ||||||||||||||||||||| ||
seq2  GCCCGAAA-TTTGA-CCCTACACCT-GCTAGCACCATCTTCCCTTAT-CC  46

seq1  CTCCATGC-AGCAACCTGGACCCGGGACTCTGGATCACAAGTCGCCCCTG  99
      |||||||| ||||||||| |||| | |||||| |||||||||||||||||
seq2  CTCCATGCAAGCAACCTGAACCCAGAACTCTGAATCACAAGTCGCCCCTG  96

seq1  CCTATATCTCTTTGGTCCTCTGCACACTTCACACCTGAGCACCCAGCCTT  149
      ||||||||||||||||||||||||||| ||||  ||||||||||||||||
seq2  CCTATATCTCTTTGGTCCTCTGCACAC-TCACCACTGAGCACCCAGCCTT  145

seq1  GGGATGTTCTGTGGTTGCTGACCCAGGATATGACCAGCACCGGAATGAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTCTGTGGTTGCTGACCCAGGATATGACCAGCACCGGAATGAGA  195

seq1  GGATGGAAATCGAGATAAGCCTCG-AAGGACCT-CCCTCTTACTCCTCCT  247
      |||||||||||||||||||||||| || ||||| ||||||||||||| ||
seq2  GGATGGAAATCGAGATAAGCCTCGAAAAGACCTCCCCTCTTACTCCT-CT  244

seq1  AGGGTCTGGAGGGCTCAGAGGGAATGGAGAGTAGAGATAGGGAGGGGCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGGAGGGCTCAGAGGGAATGGAGAGTAGAGATAGGGAGGGGCAT  294

seq1  GAAGCAGCAGGTCAGGCAGTGGAGATTCTCCTCCCCTTGTTCTAGGCAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGCAGGTCAGGCAGTGGAGATTCTCCTCCCCTTGTTCTAGGCAGC  344

seq1  AGGAGTGAGGAGAAGGCTCCTGAGGGAAATGGGGACATAGAGCTATCTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGAGGAGAAGGCTCCTGAGGGAAATGGGGACATAGAGCTATCTCC  394

seq1  TATGTTCTGGGGTGCACTCTGGACCCTGAATCCCTTCACATACTCGGACC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTGGGGTGCACTCTGGACCCTGAATCCCTTCACATACTCGGACC  444

seq1  ACGAGGTTCAATTCCAGCTAAGTAAAAGTTCCCTCTGCACAGGAGAAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGTTCAATTCCAGCTAAGTAAAAGTTCCCTCTGCACAGGAGAAGAA  494

seq1  CTGGGTCTTACTGACCCTCAATCAGCACCACTGCTAGGAACTTACCTCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTTACTGACCCTCAATCAGCACCACTGCTAGGAACTTACCTCCC  544

seq1  ACCTCTGCCTGGGGGTTCTGGTCCATTATGCCACCTCTACAGTGCTGTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCCTGGGGGTTCTGGTCCATTATGCCACCTCTACAGTGCTGTTT  594

seq1  AGCTTCGGGCCCACCCCCATCTGGCGATTTGGTAGAGAAGAGCATTTTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCGGGCCCACCCCCATCTGGCGATTTGGTAGAGAAGAGCATTTTCT  644

seq1  GGGAGGTTCAGCTCTGCTCTGAGAGCTTTTGGTTCAGAAAGAGTGATTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTTCAGCTCTGCTCTGAGAGCTTTTGGTTCAGAAAGAGTGATTCT  694

seq1  AAAGCGCCCATCCAGAATGCCTGGAAGAATGCACCGAACTACGTGAACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGCCCATCCAGAATGCCTGGAAGAATGCACCGAACTACGTGAACAA  744

seq1  AATATAAAGTAAAGAATATATATACACACACCCACAGGAGAGAACACCAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGTAAAGAATATATATACACACACCCACAGGAGAGAACACCAC  794

seq1  TCCCTGGTACAGACTAAAGTCTGAGGAAAGAGAATCCACAGGCTGGAGCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGTACAGACTAAAGTCTGAGGAAAGAGAATCCACAGGCTGGAGCC  844

seq1  TCAGCTCCCAGGCTTCCCTGGCCAGCTGCTTCAGCACAGCCACAGGGAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCCAGGCTTCCCTGGCCAGCTGCTTCAGCACAGCCACAGGGAAG  894

seq1  AGCTACCTTGCAGCAGCAGTGCACAATGCACATTCGACCTCAAAATCCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCTTGCAGCAGCAGTGCACAATGCACATTCGACCTCAAAATCCTA  944

seq1  CACAGGTGGGGGAAGAGGGGCTGAGGGAGAGGGTAGGAAAAGGACAGGCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGGGGGAAGAGGGGCTGAGGGAGAGGGTAGGAAAAGGACAGGCT  994

seq1  TCCTGCTGCCCACCTTAGAAACCTTCACAGTGCTGTTAGTGATTTTCCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTGCCCACCTTAGAAACCTTCACAGTGCTGTTAGTGATTTTCCAA  1044

seq1  TGGTGAATTC  1057
      ||||||||||
seq2  TGGTGAATTC  1054