BAC Information

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BAC

Clone NameB6Ng01-063J04
Chromosome14 (Build37)
Map Location 5,674,260 - 5,675,408
singlet/doubletsinglet
Overlap geneLOC100041195
Upstream geneEG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706
Downstream geneLOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063J04.bB6Ng01-063J04.g
ACCDH883623DH883624
length1,1551,122
definitionDH883623|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J04, 5' end.DH883624|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactactccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaatatgccccaactggtaagaaggacacatgctccactat
gttcatagcaatagccagaagctggaaagaaccaagatgcccctcaacag
aggaatggatacagaatatgtggtacatctacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggatggacct
ggagggcatcatcctgagtgaggtaacacattcacaaaggaactcacaca
atatgtactcactgataagtggatattagcccaaaacctaggatacccaa
gatataagatacaatttcctaaacacatgaaactcaagataaatgaagac
tgaagtgtggacactatgcccctccttagaagtgggaacaaaacaccctt
ggaaggagttacagagacaaagtttggagctgagatgaaagaatggacca
tgtagagactgccatatccagggatccaccccataatcagcatccaaacg
cttgacaccattgcatacactagcaagatttttatcgaaaggacccagat
gtagctgtctcttgtgagactatgccggggcctagcaaacccagaagtag
atctcacagtcagctaatggatgattcacagggcttccaatggagtagct
agagaaagtacccaaagagctaaagggatctgcaaccctatagtggaaca
acattatgaactaacagtacccggagctctgactctagagcatatgtatc
aaaacattgtctagtcgcatcactgaaaagaggcattgaacttgcaactt
tatatgccagtcaagggaacgcagggcataatggtgagatgtgtggtatg
tgaat
gaattctccagaattggaaggagaggttgcaaaaggggatcccacgggtc
catgagaggctccaggagaggcaccccagaaaaggaccaagctgggcaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggttcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaacagagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatcattctggagaagg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccttccaggagtaggtcttacaagctgaagccttggactttg
tcaatgtcagaaaaagagtcaagaatttctgatgattagtttgacagagc
caggaattgacaaacctgcagctacttttctgggagctatttaatttcat
tttgagtggcaaaaaatgtcaggagtgggcactatgagaataacagtgtg
tcctttcatggaagggagttgaagcacttcatcttccagattactgtagg
taacttgagtctctgatgaaaagaacagagaaggatgctcccctggtcat
gtcatgtggtgaggactcagacacattggatttgaagacacacgattaat
tagtgcttgatagtgctaagcactatgaacttcaggatttccctgcgtcc
catctgatatgacctgacaatgttccccatatctttatgtctgaggcagc
ttatacatttcaaggcacccgggcctgtacaggagtgtggcattttgtct
gacatggtggttaggagagacatagcttagcaaaccagctgagatagctt
tctgctctttagatcactgtctttttctttccccccctcatcttctcttg
gactcagaatgctcccctgccctgggcatcagttatgcattctttgtggt
aactatctgcagtctgctgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5674260_5675408
seq2: B6Ng01-063J04.g_69_1190

seq1  GAATTCTCCAGAATTGGAAGGAGAGGTTGCAAAAGGGGATCCCACGGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGAATTGGAAGGAGAGGTTGCAAAAGGGGATCCCACGGGTC  50

seq1  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGCTGGGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGCTGGGCAGA  100

seq1  ACTAGTTAACAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAACAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150

seq1  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200

seq1  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250

seq1  TTTGCTCTGGGTTCACCAGCAGGAATGTTTTCCTGGCTGCTCAGGCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTGGGTTCACCAGCAGGAATGTTTTCCTGGCTGCTCAGGCTATT  300

seq1  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGAAGGAAG  350

seq1  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATCATTCTGGAGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATCATTCTGGAGAAGG  400

seq1  CACAGTGAGTCCTGGGCAGAGTTGGGGAACTTCCTGGTAGAGGTAGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGTCCTGGGCAGAGTTGGGGAACTTCCTGGTAGAGGTAGGCTT  450

seq1  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500

seq1  TCAATGTCAGAAAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCAGAAAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGC  550

seq1  CAGGAATTGACAAACCTGCAGCTACTTTTCTGGGAGCTATTTAATTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTGACAAACCTGCAGCTACTTTTCTGGGAGCTATTTAATTTCAT  600

seq1  TTTGAGTGGCAAAAAATGTCAGGAGTGGGCACTATGAGAATAACAGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGGCAAAAAATGTCAGGAGTGGGCACTATGAGAATAACAGTGTG  650

seq1  TCCTTTCATGGAAGGGAGTTGAAGCACTTCATCTTCCAGATTACTGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATGGAAGGGAGTTGAAGCACTTCATCTTCCAGATTACTGTAGG  700

seq1  TAACTTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCAT  750

seq1  GTCATGTGGTGAGGACTCAGACACATTGGATTTGAAGACACACGATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGGTGAGGACTCAGACACATTGGATTTGAAGACACACGATTAAT  800

seq1  TAGTGCTTGATAGTGCTAAGCACTATGAACTTCAGGATTTCCCTGCGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTTGATAGTGCTAAGCACTATGAACTTCAGGATTTCCCTGCGTCC  850

seq1  CATCTGATATGACCTGACAATGTTCCCCATATCTTTATGTCTGAGGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATATGACCTGACAATGTTCCCCATATCTTTATGTCTGAGGCAGC  900

seq1  TTATACATTTCAAGGCAACCGGGCCTGTAACAGGGAGTGTGGCA-TATGT  949
      ||||||||||||||||| |||||||||| ||| ||||||||||| | |||
seq2  TTATACATTTCAAGGCACCCGGGCCTGT-ACA-GGAGTGTGGCATTTTGT  948

seq1  CTGACAATGGTGGTTAGGAAGAGGAACATAGCTTAGCAAACCAGCTGGAA  999
      ||||| |||||||||||| ||||  ||||||||||||||||||||||  |
seq2  CTGAC-ATGGTGGTTAGG-AGAG--ACATAGCTTAGCAAACCAGCTG--A  992

seq1  GATAGCTTTTCTGCTCTTTTAGGAATTCACTGTCTTTATCTTTTCTCTCC  1049
      |||||| ||||||||||||    |  ||||||||||| || |||| | ||
seq2  GATAGC-TTTCTGCTCTTT----AGATCACTGTCTTTTTC-TTTCCCCCC  1036

seq1  CTCCATCTTCTTCTTGGGACTCAGAATGGTCTCCCCTGCCCCTGGGCCAT  1099
      || ||||||| |||| ||||||||||||  |||||||| ||||||| |||
seq2  CT-CATCTTC-TCTT-GGACTCAGAATG--CTCCCCTG-CCCTGGG-CAT  1079

seq1  CAAGTATGCAAATTCTTTTGTGTTTACCTATCTGCAGGGTCTGCTAGAAA  1149
      ||  |||||  |||| ||||||  || |||||||||  ||||||| ||||
seq2  CAGTTATGC--ATTC-TTTGTG-GTAACTATCTGCA--GTCTGCT-GAAA  1122