BAC Information

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BAC

Clone NameB6Ng01-064C13
Chromosome14 (Build37)
Map Location 123,795,915 - 123,797,046
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream geneClybl, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064C13.bB6Ng01-064C13.g
ACCDH884031DH884032
length1,1211,118
definitionDH884031|Mus musculus domesticus DNA, BAC clone: B6Ng01-064C13, 5' end.DH884032|Mus musculus domesticus DNA, BAC clone: B6Ng01-064C13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgatctaattcaggtcaatattaaagatttccatggtggcaa
ggagtcttcaaggtgtcccatagtgttgctgttagctgcaaatgatgtgt
tctgtagtttcacacattgaataagtaaccagaaagaaggttttagaaaa
gaggcaataacaggcaaagtcgattttagaactctctcttggatcagtgt
ggctcaggtggaagccatgtgccaagtatgagagaagcaccatgaacaat
cccatctgctggtgaactgaaacttcttgcctttcagccagcaaggaaac
ttccaacacttttgtgagagacctgtcttggaagcagatgctccattttt
ctagttgaccacagccccagacattttgacagtataagaggagacactga
aatacacccaagcaagcttgttccagttcccaaatgagagaaattgttca
agacagtaagggtttctttgatagcaagttcccagcatgtagataattta
ttatatggtatcgaattacaacttatgaatttttatggtaacagaaaatg
tttccactatgataatagaagtatatatggtaaaaatccagcaacataga
aaaggaattaaagagatgttcagaccacgtgatttagtgtggccataatg
tctgcctttgtgtagcaatgagaaatttccctctttatatgtttgagata
gttcacaaactaaacaaacaaacaaacaaaaaaaaggcgtctttggaata
ggtaaacacaggaaaaaaagaaagcaaacatacaatagcatttaacatat
ttaaatttctagtccttctttcgcctggaatccctgcagtttccatgttc
agttcatttttgttttcagtcagtcctaatttgcattcttcttttcaact
tccctttgagaagccattgattttcttatattgatgcttgaccaaatgac
atgaaattgaggcattgagttgtgagtattgggctagagagattattatg
cagagtagtggcttgcctctgtcccaggtttataaacagaaagcaagggg
ttagttgtgagagagcgatgattgctggggatatagtacccccatggctt
ctatcgaagacagttccagag
gaattcctagttgttttaagttaggatctttttgcattttgtattttctt
tgattgttctgtccatgttctctatggaatcttctgcacctgagattctc
tcttccatctcttgtattctgttggtgatgcttgcatctatggttcctga
tttctttcctagggtttctatctccagagttgtctccctttgggttttct
ttcaattgtttctacttccatttttagaacctggacagttttgttcaatt
ctatcacctgtttggtagtgttttcctgtaactctctaagggatttttgt
gtttcctctttaaaggcttctagctgtttacctgtgttttcctgtattta
ctttttaaagtcctccatcatcatcatgagaaatgactttagatccatgt
cttgtttttctggtgtgatggtttatccaggacttgctatggcgggagag
tttggttctgatgatgccaagtaactggtttctgttgcttatgttctcat
gcttgcctcctgccatctgattatctcaagtgcttgcttccctcaataca
tctgattggagcctgtccttcctatagacccagtttattcaggactcctc
agagtccagctttctctgtgatcctttgcttgtgagctcttgtgaacttg
agattctgggtgtgtcagagtttttggcagtcaagcttcctctgagaccc
tgaaatactggtgtgacctagctcctgttatcctgggatcctgttgtcct
aagatcctgggcgtgttacagtgcctgaaaatggtgtctcctttgaggac
cataaagctgtccagtcagagatcctaagatccttcggagagtcctctgg
ggaccatgggggtgtccgccgactctgggcctaggtgacctgttgctggc
accgacagaagggacttgtgtcctggtcagctggtttctgcttcccttct
gcttgtctcaggtccacgtgattggatggaacagatgttgtggtccactc
accagtgatcctactcatgtgggaagtcctctaaggaccatggggtgtct
gcgaaccccataacatttgtaacaaactgaatgttgtgtgaatgggtgta
gcccattctgagtatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123795915_123797046
seq2: B6Ng01-064C13.b_49_1169

seq1  GAATTCAATGATCTAATTCAGGTCAATATTAAAGATTTCCATGGTGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGATCTAATTCAGGTCAATATTAAAGATTTCCATGGTGGCAA  50

seq1  GGAGTCTTCAAGGTGTCCCATAGTGTTGCTGTTAGCTGCAAATGATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTTCAAGGTGTCCCATAGTGTTGCTGTTAGCTGCAAATGATGTGT  100

seq1  TCTGTAGTTTCACACATTGAATAAGTAACCAGAAAGAAGGTTTTAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTTTCACACATTGAATAAGTAACCAGAAAGAAGGTTTTAGAAAA  150

seq1  GAGGCAATAACAGGCAAAGTCGATTTTAGAACTCTCTCTTGGATCAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAATAACAGGCAAAGTCGATTTTAGAACTCTCTCTTGGATCAGTGT  200

seq1  GGCTCAGGTGGAAGCCATGTGCCAAGTATGAGAGAAGCACCATGAACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGGTGGAAGCCATGTGCCAAGTATGAGAGAAGCACCATGAACAAT  250

seq1  CCCATCTGCTGGTGAACTGAAACTTCTTGCCTTTCAGCCAGCAAGGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTGCTGGTGAACTGAAACTTCTTGCCTTTCAGCCAGCAAGGAAAC  300

seq1  TTCCAACACTTTTGTGAGAGACCTGTCTTGGAAGCAGATGCTCCATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACACTTTTGTGAGAGACCTGTCTTGGAAGCAGATGCTCCATTTTT  350

seq1  CTAGTTGACCACAGCCCCAGACATTTTGACAGTATAAGAGGAGACACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGACCACAGCCCCAGACATTTTGACAGTATAAGAGGAGACACTGA  400

seq1  AATACACCCAAGCAAGCTTGTTCCAGTTCCCAAATGAGAGAAATTGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACCCAAGCAAGCTTGTTCCAGTTCCCAAATGAGAGAAATTGTTCA  450

seq1  AGACAGTAAGGGTTTCTTTGATAGCAAGTTCCCAGCATGTAGATAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTAAGGGTTTCTTTGATAGCAAGTTCCCAGCATGTAGATAATTTA  500

seq1  TTATATGGTATCGAATTACAACTTATGAATTTTTATGGTAACAGAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGTATCGAATTACAACTTATGAATTTTTATGGTAACAGAAAATG  550

seq1  TTTCCACTATGATAATAGAAGTATATATGGTAAAAATCCAGCAACATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACTATGATAATAGAAGTATATATGGTAAAAATCCAGCAACATAGA  600

seq1  AAAGGAATTAAAGAGATGTTCAGACCACGTGATTTAGTGTGGCCATAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATTAAAGAGATGTTCAGACCACGTGATTTAGTGTGGCCATAATG  650

seq1  TCTGCCTTTGTGTAGCAATGAGAAATTTCCCTCTTTATATGTTTGAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTTGTGTAGCAATGAGAAATTTCCCTCTTTATATGTTTGAGATA  700

seq1  GTTCACAAACTAAACAAACAAACAAACAAAAAAAAGGCGTCTTTGGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACAAACTAAACAAACAAACAAACAAAAAAAAGGCGTCTTTGGAATA  750

seq1  GGTAAACACAGGAAAAAAAGAAAGCAAACATACAATAGCATTTAACATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACACAGGAAAAAAAGAAAGCAAACATACAATAGCATTTAACATAT  800

seq1  TTAAATTTCTAGTCCTTCTTTCGCCTGGAATCCCTGCAGTTTCCATGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTCTAGTCCTTCTTTCGCCTGGAATCCCTGCAGTTTCCATGTTC  850

seq1  AGTTCATTTTTGTTTTCAGTCAGTCCTAATTTGCATTCTTCTTTTTCAAC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTTCATTTTTGTTTTCAGTCAGTCCTAATTTGCATTCTTC-TTTTCAAC  899

seq1  TTCCCTTTGAAGAAGCCATTGATTTTTCTTAATATTTGATGCTTGAACCA  950
      ||||||||| |||||||||||| ||||||| ||| |||||||||| ||||
seq2  TTCCCTTTG-AGAAGCCATTGA-TTTTCTT-ATA-TTGATGCTTG-ACCA  944

seq1  AATGACATGAAAATTGAGGCAATTGAGTTGTGAGTTATTGTGCTAGAGAG  1000
      ||||||||| |||||||||| ||||||||||||| ||||| |||||||||
seq2  AATGACATG-AAATTGAGGC-ATTGAGTTGTGAG-TATTGGGCTAGAGAG  991

seq1  ATTATTATGCAGAAGTTAGTGGCTTG-CTCTGTCCCAGGTTTAATAAACA  1049
      |||||||||||||   |||||||||| ||||||||||||||| |||||||
seq2  ATTATTATGCAGA--GTAGTGGCTTGCCTCTGTCCCAGGTTT-ATAAACA  1038

seq1  GATAGCAAGGGGTAAGGTTGTGAGAG-GCGATGATTGGCTGGGGAT-TAG  1097
      || |||||||||| | |||||||||| ||||||||| ||||||||| |||
seq2  GAAAGCAAGGGGTTA-GTTGTGAGAGAGCGATGATT-GCTGGGGATATAG  1086

seq1  TACCCCCAT-GCTTCCTTACTGAAGACAGTT-CAGAG  1132
      ||||||||| |||||  ||  |||||||||| |||||
seq2  TACCCCCATGGCTTC--TATCGAAGACAGTTCCAGAG  1121