BAC Information

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BAC

Clone NameB6Ng01-064G02
Chromosome14 (Build37)
Map Location 104,560,039 - 104,684,185
singlet/doubletdoublet
Overlap genenone
Upstream genePhr1, LOC100043797, Scel, LOC100043448, Slain1, Ednrb
Downstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064G02.bB6Ng01-064G02.g
ACCDH884183DH884184
length1,075760
definitionDH884183|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G02, 5' end.DH884184|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,560,039 - 104,561,112)(104,683,426 - 104,684,185)
sequence
gaattcttattttcaatgtcacatgtcaaataatcgaatcattccttaaa
taaaatcactccgtaatataaattctagaaggataatcatccaggagaaa
gcctggtctgttagtgctaacagattagaagcatgaggactcgagtccca
tcccaggaccccctaaatatccagaaggcagagacaggcagagtcctttg
gcctcactggccagccagggaagacaaatcagtcagctctaggtaaagtg
agaaactgcatcaaagcaaaacagggtggggagtcctcaagaaagtcacc
attatcaccctctagctcccacactcatacatatacttgtatacacacac
atgaacatgagcatgcacacacatgtgcgtgtatccacacacacataagg
aatatgtgtgtatatgcgtttagagcttgtttaattgttatttctaaatg
aaaactgtaaagatttggaaggagataattccaatcaaggaattacttta
agtttatcttacaatcttaatgtccgaagctcaaagatctgtatgtttga
cagcccacagggagttcttacctttcagggcctgtggctgtgagtgcagc
cctaaggagacactgccaggagactggtacaaatttaggccagcctgcta
catgtatcatgttgttggctcaaaagcttaaagtaagaaacaaaaaagaa
aaggcaggggttgggggtggaggtaacttaacagactataccaaaaaaaa
aaaaaaaatcctatcaatccaaaatgaaagtaaattagggagacacaatt
cctctgtttagggttattatcacctttttagtttttccacattaccatca
ctaaaggaaaaatgcaacctgtgttagtgaggatgtgaagaaaaggaaac
ccttatcctttggtccatgtgtcttgtctttgggtatatagctaaagaaa
atgagtctggctcacacacagtccctactgatccctactccatttttact
gtagcactattcaaagcagacatggtaaaggaacctggatatgtctctca
ttgggtgggtgtgggtaaggaatga
gaattcttaggcaggaatggacagctgcctatatcctggcattcttttct
ttgaattcgccaaaacaccaatttgagagttgtaggaggagttgttcact
tgtatgggaatgattcatctccacttgactctttatttccattttgccta
atcatcaaagttcagctctgtgtctcttgcttctggggtgcatctctgtg
ttgcctcttgtgctaacaccccctttatctgagccatatttgcccttctt
aacaatcattggctccctatattaacctgattacttgaccatagagcatt
aaaagtgttctaggctaaactattcttccactattagattttcttttaga
gtttcaaatgtgatgctctgttatattttgtattttaagaacattgacct
gaaaagtagtaagtgcctaacattgaatttaattctaaatctaaatatca
cagttatgttagctaatattcttagaagtaaatacatttggttaaatggt
aagaatttcatttggtgttgcataaccaaatggcatgctcttccctgggg
cagattagttctttccctttcagcattccttatttgcctaaatttctctg
ttagagttaagaattcctgggattttttcctattcctctctggcatgctt
gttgttcctgtcctggtccatttcataattagacagtcaggttagaaaaa
gaggtcatgagttgaagaagaagaaggatggtttggagggagaaagggga
gggagaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_104560039_104561112
seq2: B6Ng01-064G02.b_48_1122

seq1  GAATTCTTATTTTCAATGTCACATGTCAAATAATCGAATCATTCCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTTCAATGTCACATGTCAAATAATCGAATCATTCCTTAAA  50

seq1  TAAAATCACTCCGTAATATAAATTCTAGAAGGATAATCATCCAGGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCACTCCGTAATATAAATTCTAGAAGGATAATCATCCAGGAGAAA  100

seq1  GCCTGGTCTGTTAGTGCTAACAGATTAGAAGCATGAGGACTCGAGTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTGTTAGTGCTAACAGATTAGAAGCATGAGGACTCGAGTCCCA  150

seq1  TCCCAGGACCCCCTAAATATCCAGAAGGCAGAGACAGGCAGAGTCCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGACCCCCTAAATATCCAGAAGGCAGAGACAGGCAGAGTCCTTTG  200

seq1  GCCTCACTGGCCAGCCAGGGAAGACAAATCAGTCAGCTCTAGGTAAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTGGCCAGCCAGGGAAGACAAATCAGTCAGCTCTAGGTAAAGTG  250

seq1  AGAAACTGCATCAAAGCAAAACAGGGTGGGGAGTCCTCAAGAAAGTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGCATCAAAGCAAAACAGGGTGGGGAGTCCTCAAGAAAGTCACC  300

seq1  ATTATCACCCTCTAGCTCCCACACTCATACATATACTTGTATACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCACCCTCTAGCTCCCACACTCATACATATACTTGTATACACACAC  350

seq1  ATGAACATGAGCATGCACACACATGTGCGTGTATCCACACACACATAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATGAGCATGCACACACATGTGCGTGTATCCACACACACATAAGG  400

seq1  AATATGTGTGTATATGCGTTTAGAGCTTGTTTAATTGTTATTTCTAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTGTATATGCGTTTAGAGCTTGTTTAATTGTTATTTCTAAATG  450

seq1  AAAACTGTAAAGATTTGGAAGGAGATAATTCCAATCAAGGAATTACTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTAAAGATTTGGAAGGAGATAATTCCAATCAAGGAATTACTTTA  500

seq1  AGTTTATCTTACAATCTTAATGTCCGAAGCTCAAAGATCTGTATGTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATCTTACAATCTTAATGTCCGAAGCTCAAAGATCTGTATGTTTGA  550

seq1  CAGCCCACAGGGAGTTCTTACCTTTCAGGGCCTGTGGCTGTGAGTGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCACAGGGAGTTCTTACCTTTCAGGGCCTGTGGCTGTGAGTGCAGC  600

seq1  CCTAAGGAGACACTGCCAGGAGACTGGTACAAATTTAGGCCAGCCTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGAGACACTGCCAGGAGACTGGTACAAATTTAGGCCAGCCTGCTA  650

seq1  CATGTATCATGTTGTTGGCTCAAAAGCTTAAAGTAAGAAACAAAAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCATGTTGTTGGCTCAAAAGCTTAAAGTAAGAAACAAAAAAGAA  700

seq1  AAGGCAGGGGTTGGGGGTGGAGGTAACTTAACAGACTATACCAAAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGGGTTGGGGGTGGAGGTAACTTAACAGACTATACCAAAAAAAA  750

seq1  AAAAAAAATCCTATCAATCCAAAATGAAAGTAAATTAGGGAGACACAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATCCTATCAATCCAAAATGAAAGTAAATTAGGGAGACACAATT  800

seq1  CCTCTGTTTAGGGTTATTATCACCTTTTTAGTTTTTCCACATTACCATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTTAGGGTTATTATCACCTTTTTAGTTTTTCCACATTACCATCA  850

seq1  CTAAAGGAAAAATGCAACCTGTGTTAGTGAGGATGTGAAGAAAAGGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGAAAAATGCAACCTGTGTTAGTGAGGATGTGAAGAAAAGGAAAC  900

seq1  CCTTATCCTTTGGTCCATGTGTCTTGTCTTTGGGTATATAGCTAAAGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCCTTTGGTCCATGTGTCTTGTCTTTGGGTATATAGCTAAAGAAA  950

seq1  ATGAGTCTGGCTCACACACCAGTCCCTACTGATCCCTACTCCCATGTTTA  1000
      |||||||||||||||||| ||||||||||||||||||||| |||| ||||
seq2  ATGAGTCTGGCTCACACA-CAGTCCCTACTGATCCCTACT-CCATTTTTA  998

seq1  CTGTAGCACTATTCAGAGCAGACATGGTAAAGGAACCT-GAGATGTCTCT  1049
      ||||||||||||||| |||||||||||||||||||||| || ||||||||
seq2  CTGTAGCACTATTCAAAGCAGACATGGTAAAGGAACCTGGATATGTCTCT  1048

seq1  CAGTGGGTGG--GTGGGTAGGGAATGA  1074
      || |||||||  ||||||| |||||||
seq2  CATTGGGTGGGTGTGGGTAAGGAATGA  1075

seq1: chr14_104683426_104684185
seq2: B6Ng01-064G02.g_69_828 (reverse)

seq1  AATTTCTCCCTCCCCTTTCTCCCTCCAAACCATCCTTCTTCTTCTTCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCCCTCCCCTTTCTCCCTCCAAACCATCCTTCTTCTTCTTCAAC  50

seq1  TCATGACCTCTTTTTCTAACCTGACTGTCTAATTATGAAATGGACCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACCTCTTTTTCTAACCTGACTGTCTAATTATGAAATGGACCAGGA  100

seq1  CAGGAACAACAAGCATGCCAGAGAGGAATAGGAAAAAATCCCAGGAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACAACAAGCATGCCAGAGAGGAATAGGAAAAAATCCCAGGAATTC  150

seq1  TTAACTCTAACAGAGAAATTTAGGCAAATAAGGAATGCTGAAAGGGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCTAACAGAGAAATTTAGGCAAATAAGGAATGCTGAAAGGGAAAG  200

seq1  AACTAATCTGCCCCAGGGAAGAGCATGCCATTTGGTTATGCAACACCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATCTGCCCCAGGGAAGAGCATGCCATTTGGTTATGCAACACCAAA  250

seq1  TGAAATTCTTACCATTTAACCAAATGTATTTACTTCTAAGAATATTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCTTACCATTTAACCAAATGTATTTACTTCTAAGAATATTAGCT  300

seq1  AACATAACTGTGATATTTAGATTTAGAATTAAATTCAATGTTAGGCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAACTGTGATATTTAGATTTAGAATTAAATTCAATGTTAGGCACTT  350

seq1  ACTACTTTTCAGGTCAATGTTCTTAAAATACAAAATATAACAGAGCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTTCAGGTCAATGTTCTTAAAATACAAAATATAACAGAGCATCA  400

seq1  CATTTGAAACTCTAAAAGAAAATCTAATAGTGGAAGAATAGTTTAGCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAACTCTAAAAGAAAATCTAATAGTGGAAGAATAGTTTAGCCTA  450

seq1  GAACACTTTTAATGCTCTATGGTCAAGTAATCAGGTTAATATAGGGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTTTAATGCTCTATGGTCAAGTAATCAGGTTAATATAGGGAGCC  500

seq1  AATGATTGTTAAGAAGGGCAAATATGGCTCAGATAAAGGGGGTGTTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGTTAAGAAGGGCAAATATGGCTCAGATAAAGGGGGTGTTAGCA  550

seq1  CAAGAGGCAACACAGAGATGCACCCCAGAAGCAAGAGACACAGAGCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGCAACACAGAGATGCACCCCAGAAGCAAGAGACACAGAGCTGAA  600

seq1  CTTTGATGATTAGGCAAAATGGAAATAAAGAGTCAAGTGGAGATGAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGATTAGGCAAAATGGAAATAAAGAGTCAAGTGGAGATGAATCA  650

seq1  TTCCCATACAAGTGAACAACTCCTCCTACAACTCTCAAATTGGTGTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATACAAGTGAACAACTCCTCCTACAACTCTCAAATTGGTGTTTTG  700

seq1  GCGAATTCAAAGAAAAGAATGCCAGGATATAGGCAGCTGTCCATTCCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAATTCAAAGAAAAGAATGCCAGGATATAGGCAGCTGTCCATTCCTGC  750

seq1  CTAAGAATTC  760
      ||||||||||
seq2  CTAAGAATTC  760