BAC Information

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BAC

Clone NameB6Ng01-064H12
Chromosome14 (Build37)
Map Location 124,335,641 - 124,434,949
singlet/doubletdoublet
Overlap geneItgbl1, Fgf14
Upstream geneTmtc4, Vgcnl1, LOC668700
Downstream geneGA_x5J8B7W4W3R-189177-188236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H12.bB6Ng01-064H12.g
ACCDH884247DH884248
length3051,120
definitionDH884247|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H12, 5' end.DH884248|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,335,641 - 124,335,945)(124,433,813 - 124,434,949)
sequence
tttgttcagttctgagccccattttttaatggggttatttgattttctga
agtccaccttcttgattgatctcactcttatcaaattgttccctaccagg
aaggatgatttgtttgctctgcgcaatgaagtgtctgttgccccagaaag
agtgagagtaagaatgagagtgctaggggaaggagattatatagtggtgt
tttttgttttgttaattgcatggcctctgatgggcaggcatagccaagta
tcaagtttctcataaaattggagtggatgggttggggagcatggtggggc
gggag
gaattctagaaggtagtccctgctgactctgctacatttggattttagga
agttataaaatactttcctgaatgcttcttcttagaaaaccattggcata
aagcatttcataattactattaaaaatacagtatctaaaattgagagaac
ttataaatattctgtggatgtttgcttgactattctagttcacatgtata
attggtagtaataaatattttgaaaggataaagttgagtttacctcttgg
ctaaggaactgggttatgccaaatgaaagctcatttggaccaagggaacc
tctatattcttgtttttccaatttcttttcacattcatggtcttctgggt
aaccctcatgacataactgcacctttccaaggagcacatcttccccttgg
gcatccacctcttgttcttctgtgtgtacacaaagacagatatatgactc
taaaagcatttgtatttgttcttccctaagattggttgattaaaagtaag
agaaaaaagtatgtggtaacatacacatgggccagaatatctgaatttct
agctcctcaaagaagtatgttttcaccttaagtagaatttgatatgaatc
cacttaaaaatagcagtcatttaaattagaagagctttcccctctatcat
ttttgagccaagtttatttttttccttctaaaaacattcactttttttcc
tgcgcagcacagaagaaatattccaaatgaatttaaagtttacaaaatct
ctgaaagttatctttgggctgtggcagtaagtatacacatgcacacatgc
caaaattaaaattaatgaattaagaactaccttgtggaaccatctacaaa
tgtttatttttacatgaataaactaaatgcgtaaactgatactgcatcca
ctgctgtatctgtttctatatagagttttatgtagtttctatgtatatct
tttagagtgggatgtgtagacatatgattattgcttaaatctgcttttct
gtgtttagatgtgaaagaaaaacaaacatcttctttgcattcccttttta
ctaaaatgaattatggaatattataatctagcaagttaatttgagccgtt
tgtcttatcagataccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_124335641_124335945
seq2: B6Ng01-064H12.b_55_359

seq1  TTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGA  50

seq1  AGTCCACCTTCTTGATTGATCTCACTCTTATCAAATTGTTCCCTACCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACCTTCTTGATTGATCTCACTCTTATCAAATTGTTCCCTACCAGG  100

seq1  AAGGATGATTTGTTTGCTCTGCGCAATGAAGTGTCTGTTGCCCCAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGATTTGTTTGCTCTGCGCAATGAAGTGTCTGTTGCCCCAGAAAG  150

seq1  AGTGAGAGTAAGAATGAGAGTGCTAGGGGAAGGAGATTATATAGTGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGTAAGAATGAGAGTGCTAGGGGAAGGAGATTATATAGTGGTGT  200

seq1  TTTTTGTTTTGTTAATTGCATGGCCTCTGATGGGCAGGCATAGCCAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTGTTAATTGCATGGCCTCTGATGGGCAGGCATAGCCAAGTA  250

seq1  TCAAGTTTCTCATAAAATTGGAGTGGATGGGTTGGGGAGCATGGTGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTTCTCATAAAATTGGAGTGGATGGGTTGGGGAGCATGGTGGGGC  300

seq1  GGGAG  305
      |||||
seq2  GGGAG  305

seq1: chr14_124433813_124434949
seq2: B6Ng01-064H12.g_68_1187 (reverse)

seq1  -TTTTGTATCCTGATTTAAAGACAAACAGCTACAATTAAAAATTTGCTAA  49
       ||| |||| |||||   ||||||||| |||  ||||   || ||||| |
seq2  TTTTGGTAT-CTGAT---AAGACAAACGGCTCAAATT---AACTTGCT-A  42

seq1  GATTAT-ATA-TCCATAAATCATTTTTAGTAAAAAAGAGAATGCAAAGAA  97
      |||||| ||| ||||||| ||| ||||||| |||||| ||||||||||||
seq2  GATTATAATATTCCATAATTCA-TTTTAGT-AAAAAGGGAATGCAAAGAA  90

seq1  GATGTTTGTTTCTCTTTTCACATCTAAAACACAGAAAAGCAGAATTTAAG  147
      ||||||||||| || |||||||||| |||||||||||||||| |||||||
seq2  GATGTTTGTTTTTC-TTTCACATCT-AAACACAGAAAAGCAG-ATTTAAG  137

seq1  CAATAATTCATATTGTCTACACATCCCACCTTCTTAAAAGATATACATAG  197
      |||||| ||||| ||||||||||||||||  || ||||||||||||||||
seq2  CAATAA-TCATA-TGTCTACACATCCCAC--TC-TAAAAGATATACATAG  182

seq1  AAAACTACATAAAACTCTATATAGAAAACAGATACAGCAGTGGATGCAGT  247
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  -AAACTACATAAAACTCTATATAG-AAACAGATACAGCAGTGGATGCAGT  230

seq1  ATCAGTTTACGCATTTAGTTTATTCATGTAAAAATAAACATTTGTAGATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTACGCATTTAGTTTATTCATGTAAAAATAAACATTTGTAGATG  280

seq1  GTTCCACAAGGTAGTTCTTAATTCATTAATTTTAATTTTGGCATGTGTGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACAAGGTAGTTCTTAATTCATTAATTTTAATTTTGGCATGTGTGC  330

seq1  ATGTGTATACTTACTGCCACAGCCCAAAGATAACTTTCAGAGATTTTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATACTTACTGCCACAGCCCAAAGATAACTTTCAGAGATTTTGTA  380

seq1  AACTTTAAATTCATTTGGAATATTTCTTCTGTGCTGCGCAGGAAAAAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAAATTCATTTGGAATATTTCTTCTGTGCTGCGCAGGAAAAAAAG  430

seq1  TGAATGTTTTTAGAAGGAAAAAAATAAACTTGGCTCAAAAATGATAGAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTTTTAGAAGGAAAAAAATAAACTTGGCTCAAAAATGATAGAGG  480

seq1  GGAAAGCTCTTCTAATTTAAATGACTGCTATTTTTAAGTGGATTCATATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCTCTTCTAATTTAAATGACTGCTATTTTTAAGTGGATTCATATC  530

seq1  AAATTCTACTTAAGGTGAAAACATACTTCTTTGAGGAGCTAGAAATTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTACTTAAGGTGAAAACATACTTCTTTGAGGAGCTAGAAATTCAG  580

seq1  ATATTCTGGCCCATGTGTATGTTACCACATACTTTTTTCTCTTACTTTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGGCCCATGTGTATGTTACCACATACTTTTTTCTCTTACTTTTA  630

seq1  ATCAACCAATCTTAGGGAAGAACAAATACAAATGCTTTTAGAGTCATATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCAATCTTAGGGAAGAACAAATACAAATGCTTTTAGAGTCATATA  680

seq1  TCTGTCTTTGTGTACACACAGAAGAACAAGAGGTGGATGCCCAAGGGGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTGTGTACACACAGAAGAACAAGAGGTGGATGCCCAAGGGGAA  730

seq1  GATGTGCTCCTTGGAAAGGTGCAGTTATGTCATGAGGGTTACCCAGAAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCTCCTTGGAAAGGTGCAGTTATGTCATGAGGGTTACCCAGAAGA  780

seq1  CCATGAATGTGAAAAGAAATTGGAAAAACAAGAATATAGAGGTTCCCTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATGTGAAAAGAAATTGGAAAAACAAGAATATAGAGGTTCCCTTG  830

seq1  GTCCAAATGAGCTTTCATTTGGCATAACCCAGTTCCTTAGCCAAGAGGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAATGAGCTTTCATTTGGCATAACCCAGTTCCTTAGCCAAGAGGTA  880

seq1  AACTCAACTTTATCCTTTCAAAATATTTATTACTACCAATTATACATGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAACTTTATCCTTTCAAAATATTTATTACTACCAATTATACATGTG  930

seq1  AACTAGAATAGTCAAGCAAACATCCACAGAATATTTATAAGTTCTCTCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAATAGTCAAGCAAACATCCACAGAATATTTATAAGTTCTCTCAA  980

seq1  TTTTAGATACTGTATTTTTAATAGTAATTATGAAATGCTTTATGCCAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATACTGTATTTTTAATAGTAATTATGAAATGCTTTATGCCAATG  1030

seq1  GTTTTCTAAGAAGAAGCATTCAGGAAAGTATTTTATAACTTCCTAAAATC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAAGAAGAAGCATTCAGGAAAGTATTTTATAACTTCCTAAAATC  1080

seq1  CAAATGTAGCAGAGTCAGCAGGGACTACCTTCTAGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAGCAGAGTCAGCAGGGACTACCTTCTAGAATTC  1120