BAC Information

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BAC

Clone NameB6Ng01-064I11
Chromosome14 (Build37)
Map Location 119,349,015 - 119,349,486
singlet/doubletsinglet
Overlap geneDnajc3a
Upstream geneGpc6, LOC100043822, Dct, Tgds, Gpr180, LOC100043824, LOC100043539, Sox21, LOC100043825, EG668814, LOC435422, Abcc4, Cldn10, Dzip1
Downstream geneLOC100043828, Ugcgl2, Hs6st3, LOC619601, EG621324, LOC100043830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064I11.bB6Ng01-064I11.g
ACCDH884291DH884292
length1,0031,157
definitionDH884291|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I11, 5' end.DH884292|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatacagaagggctgagaagatcttgaaaaaaaa
atgttcaacatccttaatcatcagggaaatgcaaatcaaaacaagcctga
gattcaaactcacaccagtcagaatggctaggatcaaaaattcaggtgac
agcagatgctggcaaggatgtggagaaagaggaacactccttcactgctg
gcgggattgcaagcttgtacaaccactctgaaaatcagtctggcagttcc
tcagaaaactggacatagtactactggaggatcccacaataactctcctg
ggcatatacccaaaagatgttccaaccagtaagaaggacacatgctccac
tatgttcatagcaaccctatttataatagccagaagctggaaagaaccca
gatgtccctaaacagaggaatggctacagaaaatgtggtacacttactca
atggagtactactcagctattaaaaacaatgaatttatgaaattcttagg
caaaaggatgtatctggaggatatcatcctgagtgaggtaacccaatcac
aaaagaagtcacttgatatgcactcactgctaagtggattattagcccag
aaacctagaacacccaagatacaatttgcaaaacacaagaaaatcaagaa
aaaagaccaatgtgtggatacttcattcctccctagaatagggaataaaa
tacccatggaaggagttacagagacactctttcactgcctttgtaatctg
tagttttttcctctcctcttctacttctttttttttagattttttttttt
actagatgttttcttcatttacatttcagatgttctcccttttcctagtt
tcctctctgacaatcccctatatcattccccctccccaacccacccactc
ccacatcctattatttttttagatccctgtgtgtattttatgagaggaat
tgaggaataaaaaccgtagtcagatatatatgcaaacattgtcaaagtgt
ttg
gaattcttacctgaggaatacctaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgctgaggatgtggagaaagaggaacactttgttggtgggattg
caagcttgtacaaccactctggaaatcagtctggtggttcctcagaaaat
tggacatagtactactggaggatcccgcaatacctctcttgggcatatat
tcagaagatgtcccaacaggtaagaaggacacatgctccactatgttcac
agcagccttatttataatagccagaagctggaaagaacccagatgccctt
caacagaggaatggatacaaaaacgtggtacatttacacaatggagtact
actcagctattaaaaagaatgaatttatgaaattcctagccaaatggatg
gacctggagggcatcatcctgagtgaggtaacacaatcacaaaagaactc
aaataatatgtactcattgataagtggatattagccaagaaacttagtat
acccgagatatatgatacaatttgcaaaacacatgaaactgaagaagaac
gaagagcaaagtgtggacactttgccccttcttagaattgggaaacaatc
accaatggaaggagttacagagacaaagtttggagctgagacagaaggat
ggaccatctagagactgccatatccagggatccatcccataattagcctc
caaacgatgacaccattgcatacactagcaagcgttggctgagaggaccc
tgatatagctgtctcttgagagactatgccgaggcctagcaacatataag
tggatgctcacagtcagctattggatggagcacagggtccccaacggagg
agctagagaagtacccaagagctaagaagttctgcaaccctgtagttgaa
aacattatgaactaacagtacccggagctttgactctagctgcatataat
atcaaaagatggcctagtggcatacctggaaaaaggccattgaaccctac
tgtatatgccagtcaggtacgccaggccaaaaatggaatgagtgagggaa
ggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_119349015_119349486
seq2: B6Ng01-064I11.b_300_772 (reverse)

seq1  TGTCTCTGCAACTCCTTCCACGGATATTTTATTCCCTATTCTAGGGAGGA  50
      |||||||| ||||||||||| || ||||||||||||||||||||||||||
seq2  TGTCTCTGTAACTCCTTCCATGGGTATTTTATTCCCTATTCTAGGGAGGA  50

seq1  ATGAAGTATCCACGCGTTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGGA  100
      ||||||||||||| | ||||||||  |||||||||||||||||||||| |
seq2  ATGAAGTATCCACACATTGGTCTTTTTTCTTGATTTTCTTGTGTTTTGCA  100

seq1  AGTTGTATCTTGGGTATTCTAGGTTTCTGAGCTAAT-ATTCACTTATCAG  149
      | ||||||||||||| ||||||||||||| |||||| || |||||| |||
seq2  AATTGTATCTTGGGTGTTCTAGGTTTCTGGGCTAATAATCCACTTAGCAG  150

seq1  TGAGTACATATCAAGTGACTTCTTTTGTGATTGGGTTACCTCACTCAGGA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCATATCAAGTGACTTCTTTTGTGATTGGGTTACCTCACTCAGGA  200

seq1  TGATATCCTCCAGATACATCCATTTGCCCAAGAATTTCATAAATTCATTC  249
      ||||||||||||||||||||| |||||| |||||||||||||||||||| 
seq2  TGATATCCTCCAGATACATCCTTTTGCCTAAGAATTTCATAAATTCATTG  250

seq1  TTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTG  299
      |||||||||||||||||||||||||||| |||| ||||||||||||||||
seq2  TTTTTAATAGCTGAGTAGTACTCCATTGAGTAAGTGTACCACATTTTCTG  300

seq1  TATCGATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTG  349
      || | ||||||||||| |||||||||||||||||||||||||||||||| 
seq2  TAGCCATTCCTCTGTTTAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTA  350

seq1  TTATAAATAAGGCTGCTATGAACATAGTGGAACATGTGTCCTTCTTACCG  399
      ||||||||| || |||||||||||||||||| |||||||||||||||| |
seq2  TTATAAATAGGGTTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACTG  400

seq1  GTTGGGATATCTTCTGGGTATGTGCCCAGGAGAGGTATTGCTGGATCTAC  449
      ||||| | ||||| ||||||| |||||||||||| |||||  |||||  |
seq2  GTTGGAACATCTTTTGGGTATATGCCCAGGAGAGTTATTGTGGGATCCTC  450

seq1  CGGTAGTACTATGTCCAGTTTTC  472
      | |||||||||||||||||||||
seq2  CAGTAGTACTATGTCCAGTTTTC  473