BAC Information

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BAC

Clone NameB6Ng01-064O23
Chromosome14 (Build37)
Map Location 106,488,825 - 106,489,915
singlet/doubletsinglet
Overlap genenone
Upstream geneRbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2
Downstream geneEG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064O23.bB6Ng01-064O23.g
ACCDH884575DH884576
length1,1431,068
definitionDH884575|Mus musculus domesticus DNA, BAC clone: B6Ng01-064O23, 5' end.DH884576|Mus musculus domesticus DNA, BAC clone: B6Ng01-064O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccacattccccatcatcctgaagcagctgggctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaacggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcttagaagttttggctccagagaggggagtgctccta
ccaggagctacaacaaacatttcattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgcaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacgcagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaggccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat
tgtacgagggatagttatatcatgttaggcgtattacaaccttgtatgtt
tcatgtgacatgagatatatttgtgtcaagtgacaaggggtggattgtag
tggctatcctggttgtaactgacatatttgggatgactaccatcggatgg
aaggctcaccagtgaccttatctgggaggctggaaattcttatttggatc
tgggttgagaatcttgaccctagggcttggattccgatatggatctcgag
taaggacacactctttatctgggctagccttttactgggatta
gaattctgtaggacatgaacgaagagtcaaggaccacttacgaaaaggac
agggacagccttagacagggaggcaggcagagcgtgggtgggcaagtcag
aaaatagaattgatacagatacaacacatcaagattaaatccactgcttt
gtgtgctacctaaaactttaatagaaaaacaatggtatttttaaatacta
tctttggcttacaatagctaatagatggaaaaataaaataataatttaaa
aaaacttggtataaggagaaggcagacattgaagcaacaactttcataat
ctggaatcatgttactatagaaccctaaaggtaaaaaataaaatatgctg
ctagcctgtgatcttcccaagctgtacctgcagctgcattactgctcagc
ataaaagcaacctgtataaaatgtttcaatcatgattacatttattgccc
agttattgtatcattcaaatatactggcttgaataaaatattccaggaaa
attagcaatgtcagcttctttgtccttttaattaatgtggctaatgaaac
tgttgaaatctcacggtacctttgtttatattgtgtatcttctgaatatt
actagctaaaaactaaatagaaaaggcaaacataaaatttgttaaatatt
ttaggcagttcttcacttatcattagagtcatcacaactacaaataattt
caacagctattattcttatattctagatctcaaagaaccttcataatttc
ttccacaccaaattttagggccacggagatgggtggctccgtgaatcaga
gtagttgctctgacacaggactcagattcatttcccagtaccaagcttgc
aattgtctctaattccgtccggttccaggagatctagaactctcttgtgc
ctctgaggcacaagaaacacacatggtacgtatacatacatgcagtcgac
actataactttaaaagtaaggaatcttttttaaaataagacaataaatat
atatttatctaacttaactcctaatataatattgcttcattctgagacgg
ggcaggggaaataaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106488825_106489915
seq2: B6Ng01-064O23.g_67_1134 (reverse)

seq1  GTATTTATCTCCCCCTGCCCCCGTCTCAGAATGACAGCAAATATTTATAT  50
      |||||||| | |||||| |||||||||||||||| ||| |||| ||||||
seq2  GTATTTAT-TTCCCCTG-CCCCGTCTCAGAATGA-AGC-AATA-TTATAT  45

seq1  TAGGAGTTAAAATTTTAGATAAAATTATAATTAATTTTATTTGTCTTAAT  100
      ||||||||||    |||||||||  |||| |||       ||||||| ||
seq2  TAGGAGTTAA---GTTAGATAAATATATATTTA-------TTGTCTT-AT  84

seq1  TTTAAAAAAGATTTCTTTACTTTTTAAAGTGTATTAGTGTTCGACTGCAT  150
      ||||||||||| ||| |||| ||||||||| || ||||| ||||||||||
seq2  TTTAAAAAAGA-TTCCTTAC-TTTTAAAGT-TA-TAGTG-TCGACTGCAT  129

seq1  GTATGTATACGTACCATGTGTGTTTCTTGTGCCCTCAGAGGCCACAAGAG  200
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  GTATGTATACGTACCATGTGTGTTTCTTGTG-CCTCAGAGG-CACAAGAG  177

seq1  AGTTCTAGATCTCCTGGAACCGGACGGAATTAGAGACAATTGCAAGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGATCTCCTGGAACCGGACGGAATTAGAGACAATTGCAAGCTTG  227

seq1  GTACTGGGAAATGAATCTGAGTCCTGTGTCAGAGCAACTACTCTGATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGAAATGAATCTGAGTCCTGTGTCAGAGCAACTACTCTGATTCA  277

seq1  CGGAGCCACCCATCTCCGTGGCCCTAAAATTTGGTGTGGAAGAAATTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCCACCCATCTCCGTGGCCCTAAAATTTGGTGTGGAAGAAATTATG  327

seq1  AAGGTTCTTTGAGATCTAGAATATAAGAATAATAGCTGTTGAAATTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTTTGAGATCTAGAATATAAGAATAATAGCTGTTGAAATTATTT  377

seq1  GTAGTTGTGATGACTCTAATGATAAGTGAAGAACTGCCTAAAATATTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGTGATGACTCTAATGATAAGTGAAGAACTGCCTAAAATATTTAA  427

seq1  CAAATTTTATGTTTGCCTTTTCTATTTAGTTTTTAGCTAGTAATATTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTATGTTTGCCTTTTCTATTTAGTTTTTAGCTAGTAATATTCAG  477

seq1  AAGATACACAATATAAACAAAGGTACCGTGAGATTTCAACAGTTTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACACAATATAAACAAAGGTACCGTGAGATTTCAACAGTTTCATTA  527

seq1  GCCACATTAATTAAAAGGACAAAGAAGCTGACATTGCTAATTTTCCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATTAATTAAAAGGACAAAGAAGCTGACATTGCTAATTTTCCTGGA  577

seq1  ATATTTTATTCAAGCCAGTATATTTGAATGATACAATAACTGGGCAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTCAAGCCAGTATATTTGAATGATACAATAACTGGGCAATAA  627

seq1  ATGTAATCATGATTGAAACATTTTATACAGGTTGCTTTTATGCTGAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATCATGATTGAAACATTTTATACAGGTTGCTTTTATGCTGAGCAG  677

seq1  TAATGCAGCTGCAGGTACAGCTTGGGAAGATCACAGGCTAGCAGCATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAGCTGCAGGTACAGCTTGGGAAGATCACAGGCTAGCAGCATATT  727

seq1  TTATTTTTTACCTTTAGGGTTCTATAGTAACATGATTCCAGATTATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTACCTTTAGGGTTCTATAGTAACATGATTCCAGATTATGAAA  777

seq1  GTTGTTGCTTCAATGTCTGCCTTCTCCTTATACCAAGTTTTTTTAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGCTTCAATGTCTGCCTTCTCCTTATACCAAGTTTTTTTAAATTA  827

seq1  TTATTTTATTTTTCCATCTATTAGCTATTGTAAGCCAAAGATAGTATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTTTCCATCTATTAGCTATTGTAAGCCAAAGATAGTATTTA  877

seq1  AAAATACCATTGTTTTTCTATTAAAGTTTTAGGTAGCACACAAAGCAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCATTGTTTTTCTATTAAAGTTTTAGGTAGCACACAAAGCAGTG  927

seq1  GATTTAATCTTGATGTGTTGTATCTGTATCAATTCTATTTTCTGACTTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATCTTGATGTGTTGTATCTGTATCAATTCTATTTTCTGACTTGC  977

seq1  CCACCCACGCTCTGCCTGCCTCCCTGTCTAAGGCTGTCCCTGTCCTTTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACGCTCTGCCTGCCTCCCTGTCTAAGGCTGTCCCTGTCCTTTTC  1027

seq1  GTAAGTGGTCCTTGACTCTTCGTTCATGTCCTACAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGGTCCTTGACTCTTCGTTCATGTCCTACAGAATTC  1068