BAC Information

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BAC

Clone NameB6Ng01-065B04
Chromosome14 (Build37)
Map Location 108,996,172 - 108,997,212
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1, LOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065B04.bB6Ng01-065B04.g
ACCDH884661DH884662
length1,1541,033
definitionDH884661|Mus musculus domesticus DNA, BAC clone: B6Ng01-065B04, 5' end.DH884662|Mus musculus domesticus DNA, BAC clone: B6Ng01-065B04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcactaaacccatctgattctgggcttttattggttgggagac
ttttaaagactgcttatatttctttagaggttataggaatgtttggatag
tttatctgatcctgacttaagtttagtatttggtatatgtctagaaaatt
ttccatttcatccagattttccagttgtgttgagtataggcttttgtagt
agaatctgatgattttttgaattttctcagtttctgatctcagttctgct
ctatctccctttcatttctgattttgttcatttggatactgactctgtgc
cctctggttagtctggctatgggcttatccagcttgttgatgttcttaca
gaaccaactccttgttttgtggattctttgtattgttctttttgtttcta
cttggttgattttagcccctagtttgattattttctactgtcaactcctc
atggatgtgtttggtactttttgttctagggttttcaggagtgctgttga
gctggtagtatatactctctccacattttttggagacactcaaagctgag
ttttcctttaccactgttttccttatgtctcgtaagttttggtatgttga
gccttcattttcattgaattctaaaaagtctttagtgtctttctgtattt
catccttgactatgctatcattgagtagggcattgttcagattccatgtg
tatatggtctttctgttggttttgttgctattgaggaccagctttagtca
gtggtgatctgatgggatacatgggattatttcagtcttcttgtatctgt
tgaggcctgttttgtgaccaattaaatggtcaattttggagatggtacca
tgaattgctgaaaataagtgtattattttgttttatgatgaattgtctat
agatatctgataaattcatttggaccataactttgttagtttcactatgt
ctttgtttagtttctgtttccatgctgtgtcattgatgagagtgtggtgg
taagtcttccactgttatgtggtgaggtgcattgtggctgtacttagtaa
gtcttttatgaagtgggcctttcattggcacagatcgagtgagaactctt
gtgaagtttccttagaatacgagtgcctctccttctggagggcttttagg
atgt
gaattctttatttcccagatttactatttctgcagtccagtcctaatctg
cctggaatgcagacacgcctataatcccaggagactgaggcaactagaac
tctgagtacaagatcagtctggtacaaagcaagttcctggtacaaaaaaa
aaaacttaggtacaggtgtggtggtacacatttttagtacaaacactcag
gagtcagtgatgagaagtgcagtggagtttagtgtggcagattggttgat
ggcagttaatttcattgagttcaaaggcagtttttactagatagttttta
cagagactgggtgaagaaagagctagctacacatagctgaagattgaatg
aacaagagaatgagaaggagccaaaagaataaaacatattgacaaaagtt
aaggccaggtagaacaattcattcagaagccaagagaagtgagtttgagt
cagtcagcttggagaggagttttagccagatcagctgagttgaaccctct
agccagagttcagaaagagctacaaagggtaagctgattcaggagtaagc
ctctgagataacaattgcattgggtgaataaaagtttcttttacatgata
tagatatgagaaagaatttactaacaggtaatgataatgtaggcttatgt
ttccattgagcttattcagctgtaagccagggagatgacaattacatcag
atgaaaaaagttaattttacatgggctgttttcagagaggcgggtgattt
attttttttctcactgtcacaaatctgttaagtagagggtaatagctagg
gctggccgggctatgtgtcttggtcccagttgtctgtagtacatgttgtt
tcatatatcactttccagctcgcttgtttggacaagttcataggtatcta
gaaagcataaaaagcatagtgatatttgatcgcctctttctggctcataa
cactgtacagcacaagtgtcatatacaagtaaaggccaaatttgaacttt
gagaacgtgttttccaagttaagttcatttaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108996172_108997212
seq2: B6Ng01-065B04.g_66_1098 (reverse)

seq1  GTTAAATGACACTTAACTTTGAAAACACTGTTCTCAAAGTTTCAAATTTA  50
      ||||||||| ||||||||| |||||||| |||||||||| ||||||||  
seq2  GTTAAATGA-ACTTAACTTGGAAAACAC-GTTCTCAAAG-TTCAAATT--  45

seq1  TGGCCTTTACTTGTATATGACACTTGTGCTGTACAGTGTTATGGAGCCAG  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGGCCTTTACTTGTATATGACACTTGTGCTGTACAGTGTTAT-GAGCCAG  94

seq1  AAAGAGGCGATTCAAATATCACTATGCTTTATATTGCTTTCTAGATACCT  150
      |||||||||| ||||||||||||||||||| || ||||||||||||||||
seq2  AAAGAGGCGA-TCAAATATCACTATGCTTTTTA-TGCTTTCTAGATACCT  142

seq1  ATGAACTTGTCCAAACAAGCGAGCTGGAAAGTGATATATGAAACAACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTGTCCAAACAAGCGAGCTGGAAAGTGATATATGAAACAACATG  192

seq1  TACTACAGACAACTGGGACCAAGACACATAGCCCGGCCAGCCCTAGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAGACAACTGGGACCAAGACACATAGCCCGGCCAGCCCTAGCTAT  242

seq1  TACCCTCTACTTAACAGATTTGTGACAGTGAGAAAAAAAATAAATCACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCTACTTAACAGATTTGTGACAGTGAGAAAAAAAATAAATCACCC  292

seq1  GCCTCTCTGAAAACAGCCCATGTAAAATTAACTTTTTTCATCTGATGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCTGAAAACAGCCCATGTAAAATTAACTTTTTTCATCTGATGTAA  342

seq1  TTGTCATCTCCCTGGCTTACAGCTGAATAAGCTCAATGGAAACATAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCTCCCTGGCTTACAGCTGAATAAGCTCAATGGAAACATAAGCC  392

seq1  TACATTATCATTACCTGTTAGTAAATTCTTTCTCATATCTATATCATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATCATTACCTGTTAGTAAATTCTTTCTCATATCTATATCATGTA  442

seq1  AAAGAAACTTTTATTCACCCAATGCAATTGTTATCTCAGAGGCTTACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACTTTTATTCACCCAATGCAATTGTTATCTCAGAGGCTTACTCC  492

seq1  TGAATCAGCTTACCCTTTGTAGCTCTTTCTGAACTCTGGCTAGAGGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAGCTTACCCTTTGTAGCTCTTTCTGAACTCTGGCTAGAGGGTTC  542

seq1  AACTCAGCTGATCTGGCTAAAACTCCTCTCCAAGCTGACTGACTCAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGCTGATCTGGCTAAAACTCCTCTCCAAGCTGACTGACTCAAACT  592

seq1  CACTTCTCTTGGCTTCTGAATGAATTGTTCTACCTGGCCTTAACTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCTTGGCTTCTGAATGAATTGTTCTACCTGGCCTTAACTTTTGT  642

seq1  CAATATGTTTTAATCTTCTGGCTCCTTCTCATTCTCTTGTTCATTCAATC  700
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  CAATATGTTTTATTCTTTTGGCTCCTTCTCATTCTCTTGTTCATTCAATC  692

seq1  TTCAGCTATGTGTAGCTAGCTCTTTCTTCACCCAGTCTCTGTAAAAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTATGTGTAGCTAGCTCTTTCTTCACCCAGTCTCTGTAAAAACTA  742

seq1  TCTAGTAAAAACTGCCTTTGAACTCAATGAAATTAACTGCCATCAACCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAAAAACTGCCTTTGAACTCAATGAAATTAACTGCCATCAACCAA  792

seq1  TCTGCCACACTAAACTCCACTGCACTTCTCATCACTGACTCCTGAGTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACACTAAACTCCACTGCACTTCTCATCACTGACTCCTGAGTGTT  842

seq1  TGTACTAAAAATGTGTACCACCACACCTGTACCTAAGTTTTTTTTTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAAAAATGTGTACCACCACACCTGTACCTAAGTTTTTTTTTTTGT  892

seq1  ACCAGGAACTTGCTTTGTACCAGACTGATCTTGTACTCAGAGTTCTAGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAACTTGCTTTGTACCAGACTGATCTTGTACTCAGAGTTCTAGTT  942

seq1  GCCTCAGTCTCCTGGGATTATAGGCGTGTCTGCATTCCAGGCAGATTAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGTCTCCTGGGATTATAGGCGTGTCTGCATTCCAGGCAGATTAGG  992

seq1  ACTGGACTGCAGAAATAGTAAATCTGGGAAATAAAGAATTC  1041
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACTGCAGAAATAGTAAATCTGGGAAATAAAGAATTC  1033