BAC Information

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BAC

Clone NameB6Ng01-065P01
Chromosome14 (Build37)
Map Location 41,967,504 - 41,968,360
singlet/doubletsinglet
Overlap geneMbl1
Upstream geneLOC218945, LOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079
Downstream geneSftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P01.bB6Ng01-065P01.g
ACCDH885268DH885269
length1,114853
definitionDH885268|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P01, 5' end.DH885269|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagttttttatcacaattg
ctctgtagtaaagcttttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctcggttttttgttattccaga
tgaatttgcaaattgctccttctaattcgtgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggctagatagccatt
tttacaatgttggtcctgccaatccatgagcatgggagatctttccatct
tctgagattctctttattttctttcttatggacttgaagttttatcatac
agatctttcacttcctttcgttagagtcacgccgaggatattttaatatt
atttgtgggctattggaggaaggttgttttccctatttctttcagcctgg
tcatatctttgtgtaaagaaagggcattgactgttgagtaattttatcca
gctactcccgaactgttataagggtgatgactctctgtggaatttagggc
cctttattgaccta
gaattcaggatcttcggaattgcagtcagtgctcttactgctgagccatc
tcaccaggcccttaacagctctcttgaatctcatacttctatacaggagt
ctgtgaggtggagctgtccctcaggacagatatacagacttgggaggcag
aggatctctcaactctgagtcaccaataactagctctctggctctttcgt
ggagtcactgtggatcaaactttgaacttctagagaaaaagaatgagcaa
cagccactgggacatgctgcctttgtctcccaacaggtcaagggctcagg
ggcttgcagggccctccagggaaattggggcctccaggaagtgttggaag
ccctggaagtccaggaccaaaaggccaaaagggggaccatggagacaata
gaggtaagagaatgccttagaatgattagcttgagtgcaggtatgtgtcc
gaggaagagggagtcatgtggggaggtacctttggttttcatgcctcaca
aggtcgtgcttagtgctgtttcctgactcaatgtcactatgtccccccca
aataccctccagagccatttccctatccgttctccttaggacacaaggtt
aactttttctacaggtagaagtccagtgttttgatccaggctatgagggg
agggaccgtgcccctcccccatgtctatagtaagaagagttgcatgaaaa
tgggtctgtctcattgatcccctgagtaaaggagaataccatacatagta
actgcttcagagtgatactgacaacaacacaccaataaaaggattttaat
attaaagagttgcccggaagctggggaagaccccagttgttaaatgttat
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_41967504_41968360
seq2: B6Ng01-065P01.g_71_923

seq1  GAATTCAGGATCTTCGGAATTGCAGTCAGTGCTCTTACTGCTGAGCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATCTTCGGAATTGCAGTCAGTGCTCTTACTGCTGAGCCATC  50

seq1  TCACCAGGCCCTTAACAGCTCTCTTGAATCTCATACTTCTATACAGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGGCCCTTAACAGCTCTCTTGAATCTCATACTTCTATACAGGAGT  100

seq1  CTGTGAGGTGGAGCTGTCCCTCAGGACAGATATACAGACTTGGGAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGTGGAGCTGTCCCTCAGGACAGATATACAGACTTGGGAGGCAG  150

seq1  AGGATCTCTCAACTCTGAGTCACCAATAACTAGCTCTCTGGCTCTTTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTCTCAACTCTGAGTCACCAATAACTAGCTCTCTGGCTCTTTCGT  200

seq1  GGAGTCACTGTGGATCAAACTTTGAACTTCTAGAGAAAAAGAATGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCACTGTGGATCAAACTTTGAACTTCTAGAGAAAAAGAATGAGCAA  250

seq1  CAGCCACTGGGACATGCTGCCTTTGTCTCCCAACAGGTCAAGGGCTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTGGGACATGCTGCCTTTGTCTCCCAACAGGTCAAGGGCTCAGG  300

seq1  GGCTTGCAGGGCCCTCCAGGGAAATTGGGGCCTCCAGGAAGTGTTGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCAGGGCCCTCCAGGGAAATTGGGGCCTCCAGGAAGTGTTGGAAG  350

seq1  CCCTGGAAGTCCAGGACCAAAAGGCCAAAAGGGGGACCATGGAGACAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAAGTCCAGGACCAAAAGGCCAAAAGGGGGACCATGGAGACAATA  400

seq1  GAGGTAAGAGAATGCCTTAGAATGATTAGCTTGAGTGCAGGTATGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAAGAGAATGCCTTAGAATGATTAGCTTGAGTGCAGGTATGTGTCC  450

seq1  GAGGAAGAGGGAGTCATGTGGGGAGGTACCTTTGGTTTTCATGCCTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAGGGAGTCATGTGGGGAGGTACCTTTGGTTTTCATGCCTCACA  500

seq1  AGGTCGTGCTTAGTGCTGTTTCCTGACTCAATGTCACTATGTCCCCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGTGCTTAGTGCTGTTTCCTGACTCAATGTCACTATGTCCCCCCCA  550

seq1  AATACCCTCCAGAGCCATTTCCCTATCCGTTCTCCTTAGGACACAAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCTCCAGAGCCATTTCCCTATCCGTTCTCCTTAGGACACAAGGTT  600

seq1  AAC-TTTTCTACAGGTAGAAGTCCAGTG-TTTGATCCAGGCTATGA-GGG  647
      ||| |||||||||||||||||||||||| ||||||||||||||||| |||
seq2  AACTTTTTCTACAGGTAGAAGTCCAGTGTTTTGATCCAGGCTATGAGGGG  650

seq1  AGGGACCGTGCCCCTCCCCCATGTCTATAGTAAGAAGAGTTGCATGAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCGTGCCCCTCCCCCATGTCTATAGTAAGAAGAGTTGCATGAAAA  700

seq1  T-GGTCTGTCTCATTGATCCCCTGAGTAAAGGAGAATACCATACATAGCA  746
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGGTCTGTCTCATTGATCCCCTGAGTAAAGGAGAATACCATACATAGTA  750

seq1  ACTGCTTCAGAGTGAAACTGAACAACAACAACAACAAAAAAAAGGATTAA  796
      ||||||||||||||| |||| |||||||||   || || |||||||||  
seq2  ACTGCTTCAGAGTGATACTG-ACAACAACA--CACCAATAAAAGGATTTT  797

seq1  AAGTATTAAAGAGTTTGCCTGGAGGCTGGGGAGGAGCCCCAGTTGGTAGA  846
      || |||||||||| ||||| ||| |||||||| || ||||||||| || |
seq2  AA-TATTAAAGAG-TTGCCCGGAAGCTGGGGAAGA-CCCCAGTTGTTA-A  843

seq1  ATGTTTATTGC  857
      ||| |||||||
seq2  ATG-TTATTGC  853