BAC Information

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BAC

Clone NameB6Ng01-066A18
Chromosome14 (Build37)
Map Location 122,005,741 - 122,006,788
singlet/doubletsinglet
Overlap geneDock9
Upstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577
Downstream geneLOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066A18.bB6Ng01-066A18.g
ACCDH885340DH885341
length1,0281,172
definitionDH885340|Mus musculus domesticus DNA, BAC clone: B6Ng01-066A18, 5' end.DH885341|Mus musculus domesticus DNA, BAC clone: B6Ng01-066A18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgccttgtgtctttattagaaaaaggggtgggctcacaaagac
tgaacaccatgtgcagacagagacaaagtggaatgaccacgaatagcaat
ggtggttgccagccacaccggatgtgaggaacccctcccccccccacccc
tgcagccctgaagactccttggctgtgactgtctacatgagagaatagaa
cgccatcatcctaagtcacaaagtccacagccctctgataatatccccaa
ggacagtgcagaggtgttgtcaccaagcctgcgtacttacactgcccggg
ttcgccggaaagggtgacacatccctcacgttgatccgctggacattttc
aataaccacaccaaactgaggcaggtggagagtggctatccttgcctggt
gactctgaaagaagatacacatgggaagtgtgttccctggctgaccaccg
gatggaagatgacgttacactggcgagaaaaaaattctccaccctgttaa
caggatttgtctaaggggtcatttccttactccgcttgagcatttatcat
cccttcttccctcccctgggaactactcaccctcgaattgcatctgtcat
caaaagaatgttttatcccaggttcttgagcatgctgatggcgataactc
atacctcccagaactcctggagcgcagtgcccacctcccttaactgcagt
cccaccgagaagtggtttctgcacaactcctctgctaaggactagtcaag
ctggagatctgaaaaaaggcatgtgggactcatgttcagggggtccactg
tcgcctgagcccctcagcccagctcgtgtgtggtacaggtgacaagctct
gcctcacgcaaaacaaaaagcaagcattctgcaggctgctcattcctaac
ctataaatactgcaggaccctgagagatgaaatagctgccctgaattttg
acatgaactggtttagtgcctgttttagaagatctgacacattatttaaa
aacgttattgatattttttttctaagat
gaattctgagtgtttgtgagaaaactccaagaaaacagactagagtcttg
tgacctcagatctttttaaaacacaaaattgttcttggactgtacgtctc
agttgtagcagataggagtgagttcacttcagattattcattacaactgg
ctgttgtcagtcgtttatattcttctatagaaaaacatggttttgccgtg
tgcggcttgtctttgtggttgaacactttactcaggtgacacgtcttaac
tctcaaaatacaaattgtctaatgccctgaacaaagttggctattgcatg
aggctttatggtcctgctcatttttaggctctgctctcccaggtcccacc
acatctagagtaaagacacccaccgatgtattttaaacttgccttgattt
aagactttcttagttccataaagcgatacaactgaatgagactgcttctg
ggctggaacatgaaatttggggtaacctaaatttgaagccacggtctagg
ataaacttctattccctttaaggtgagagctgtgactttttgcatcgaca
actatgtatatgaaaatcacatgtgaagttgctttgtgtctgcttataat
caacagtatgtttttaaggctcatatacattataacacaaagcagtgtat
gctcttattcatggttgaatagtattcccgtgtttgcaaacaccaccatt
cctcagtgatggaatttgggttgattccagtttttgtttttgtttttctt
gagacagggttctctgtgtagctctggctgtcctgggaactcactctgta
gaccaggctggcctcaaactcagaaatctgcctgcttctgcctcccgagt
gctgggattaaaggcatgcaccactactacccagcttgagttcagttttg
gctagaatgaacaatgctacagcctctataatcattcggtgcatgatttt
gtgtgtgacatttatctttggtctctgtgtgtctgcttagggtagaattg
tttagcagtgtaattgcgtgttaaagatttgagactcccaactgtttttt
caacagctaattttatttccatctatgagatctgatatctctaccctacc
tcggcctagtccagtttcttttcctatggcccattaagaggtgaaggttc
ttattggggttttgattgcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122005741_122006788
seq2: B6Ng01-066A18.b_39_1063

seq1  GAATTCAGCCACTTGTGTCTTTATTAAGAAAAAGGGGTGGGCTCACAAAG  50
      |||||||  | |||||||||||||| ||||||||||||||||||||||||
seq2  GAATTCATGC-CTTGTGTCTTTATT-AGAAAAAGGGGTGGGCTCACAAAG  48

seq1  ACTGAACACCATGTGCAGACAGAGACAAAGTGGAATGACCACGAAGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTGAACACCATGTGCAGACAGAGACAAAGTGGAATGACCACGAATAGCA  98

seq1  GTGGTGGTTGCCAGCAACACCGGATGTGAGGAACCACGCCCCCCCCCACC  150
       |||||||||||||| ||||||||||||||||||| | ||||||||||||
seq2  ATGGTGGTTGCCAGCCACACCGGATGTGAGGAACCCCTCCCCCCCCCACC  148

seq1  CCTGCAGCCCTGAAGACTCCTTGGCTGTGACTGTCTACATGAGAGAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCCCTGAAGACTCCTTGGCTGTGACTGTCTACATGAGAGAATAG  198

seq1  AACGCCATCATCCTAAGTCACAGAGTCCACAGCCCTCTGATAATATCCCC  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACGCCATCATCCTAAGTCACAAAGTCCACAGCCCTCTGATAATATCCCC  248

seq1  AAGGACAGTGCAGAGGTGTTGTCACCAAGCCTGCGTACTTACACTGCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGTGCAGAGGTGTTGTCACCAAGCCTGCGTACTTACACTGCCCG  298

seq1  GGTTCACAGGAAAGGGTGACACATCCCTCACGTTGATCCGCTGGACATTT  350
      ||||| | ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCGCCGGAAAGGGTGACACATCCCTCACGTTGATCCGCTGGACATTT  348

seq1  TCAATAAGCAGACCAAACAGAGGCAGGTAGAGAGTGGCTATCCTTGCCTG  400
      ||||||| || ||||||| ||||||||| |||||||||||||||||||||
seq2  TCAATAACCACACCAAACTGAGGCAGGTGGAGAGTGGCTATCCTTGCCTG  398

seq1  GTGACTCTGAAAGAAGATACACATGGTAAGTGTGTTCCCTGGCTGAGCAC  450
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  GTGACTCTGAAAGAAGATACACATGGGAAGTGTGTTCCCTGGCTGACCAC  448

seq1  CGGATGGCAGAGGACGTTACACTGGCAAGAAAAAAAGTCTCAGCCCTGTT  500
      ||||||| ||| |||||||||||||| ||||||||| ||||  |||||||
seq2  CGGATGGAAGATGACGTTACACTGGCGAGAAAAAAATTCTCCACCCTGTT  498

seq1  AACAGGATTTGTCTAAGGGGTCATTTCCTTACACCGCTTGAGCATTTATC  550
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AACAGGATTTGTCTAAGGGGTCATTTCCTTACTCCGCTTGAGCATTTATC  548

seq1  ATCCCTTCTTCCCTCCCCTGGGAACTACTCACCCTCGAATTGTATCTGTC  600
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCCCTTCTTCCCTCCCCTGGGAACTACTCACCCTCGAATTGCATCTGTC  598

seq1  ATCAAAAGAATGTTTTATCAGCAGGTTCTTGAGCATGCTGATGGCGATGA  650
      |||||||||||||||||||  ||||||||||||||||||||||||||| |
seq2  ATCAAAAGAATGTTTTATC-CCAGGTTCTTGAGCATGCTGATGGCGATAA  647

seq1  CTCGGACCTCCCGGAACTCCTGGAGCGCAGTGCCCACCTCCCTTAGCAAC  700
      |||  ||||||| |||||||||||||||||||||||||||||||| |  |
seq2  CTCATACCTCCCAGAACTCCTGGAGCGCAGTGCCCACCTCCCTTAACTGC  697

seq1  AGTCCCACCAAGAAGTGGTTTCTGCAGAACTCGTCTGTTAAGGAGTAGTC  750
      ||||||||| |||||||||||||||| ||||| |||| |||||| |||||
seq2  AGTCCCACCGAGAAGTGGTTTCTGCACAACTCCTCTGCTAAGGACTAGTC  747

seq1  AAGCTGGAGATCTGAGAAAAGGCAGGTGGGACTCAGGTTCAGGGGGTCCA  800
      ||||||||||||||| |||||||| |||||||||| ||||||||||||||
seq2  AAGCTGGAGATCTGAAAAAAGGCATGTGGGACTCATGTTCAGGGGGTCCA  797

seq1  CTGTCGCCTGAGCCCCTCAGCCCACCTCGTGTGTGGCTACAGGTGACAAA  850
      |||||||||||||||||||||||| ||||||||||| |||||||||| ||
seq2  CTGTCGCCTGAGCCCCTCAGCCCAGCTCGTGTGTGG-TACAGGTGAC-AA  845

seq1  ACTCTGCCTCACACAAAAACAAAAAACCAGGCAATTCTGCAAGGCTGCTC  900
       ||||||||||| | |||||||||| | ||   ||||||| |||||||||
seq2  GCTCTGCCTCACGC-AAAACAAAAAGCAAG--CATTCTGC-AGGCTGCTC  891

seq1  TATTCCTTAACCTATAAATTCCCACAGGAGCCCTGAGCAGATACAAATAG  950
       ||||| ||||||||||| | |  ||||| ||||||| ||||  ||||||
seq2  -ATTCC-TAACCTATAAA-TACTGCAGGA-CCCTGAG-AGAT-GAAATAG  935

seq1  CTGCCCTGAATTTTGAACATGGAACTGGTTTTAGTGCCTGTTTTTAGAAG  1000
      ||||||||||||||| |||| ||||||| ||||||||||| |||||||||
seq2  CTGCCCTGAATTTTG-ACAT-GAACTGG-TTTAGTGCCTG-TTTTAGAAG  981

seq1  ATCTGACAGCAATTATATTAAAAACGTTATTGATAATTTTTTTTCTAA  1048
      ||||||||   ||||| ||||||||||||||||| |||||||||||||
seq2  ATCTGACA--CATTAT-TTAAAAACGTTATTGAT-ATTTTTTTTCTAA  1025