BAC Information

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BAC

Clone NameB6Ng01-067E14
Chromosome14 (Build37)
Map Location 53,922,074 - 54,134,967
singlet/doubletdoublet
Overlap geneLOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765
Upstream geneMettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik
Downstream geneEG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777, A630038E17Rik, EG626545, Dad1, Abhd4, Olfr49, EG666623, LOC667819, LOC100042642, 5330426L24Rik, Oxa1l, Slc7a7, Mrpl52, Mmp14, Lrp10, Rem2, Prmt5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067E14.bB6Ng01-067E14.g
ACCDH886224DH886225
length9661,138
definitionDH886224|Mus musculus domesticus DNA, BAC clone: B6Ng01-067E14, 5' end.DH886225|Mus musculus domesticus DNA, BAC clone: B6Ng01-067E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,134,004 - 54,134,967)(53,922,074 - 53,923,221)
sequence
ttttggaacatcaagaacatcctttatggtagcaatcctagtccgtataa
aaatctccacatggcagcagtgggtgctaattcagaactatatgaagggt
gaggatgaacaaaaggaactcacaatctgtcattttttccagtggacttc
taaggactaattggattggtttattgataagaccatggattggtacatag
cagataaacttaggtacataaaattcgactttttatgctagaactgtgga
gggctataaaatagaataagtttccatcataaaatatgttgcacagtaga
cagtcaataatttcttgaatttcttgagtatagtttttaattcttgctgt
gttgttagtgtagaactgcaataatatttcttgacataaatattaatttc
tattaagattgaaaaattttatgtgccatcttttaggtattgggctaagg
ttagctatgactaactccataataaaatttagtagtacacttagtatgaa
tgcatttacagaccatctatattaaggcaaaacacacccaaacagataaa
aaacaaaagcacagagaatacaaaatataaagcacaaaaaacactcccca
tagcatattgctgataaaatattaaatatcaagaaaacaaacaaggaagg
ggtaataaaggaagtgatggaaaaaccacaagctacatttaaaaaatcta
taacattaacaactgatatctcaatggacactttaaaagtctagctctgt
tcctctttctccacatcctctccagcatctgctgtcacctgaatttttga
tcttagccattctgactagtgtgagatggaatctagggttgttttgattt
gcatttccctgatgattaaggatgccgaaccttttttttcaggtgtttct
cagccatcaagtattctctcaggtaagaaatctttgtttagcttcgaacc
cctattttttatgggg
gaattccaggggcagcctcatcaatctgttctacttggcttcaggaacaa
aggagaatgggaggctaaagtcagcatttgattctaaggagcgctacagc
accctgcacatcagggatgcccagctggaggactcaggcacttacttctg
tgctgctgaggcacagtgctcccagcaaggctggagcctggccccaaact
gcagctgagtgtgcagctccagtccccgccttgcacagctggggcttcat
cagatttctaccagtcacagggaagatgtgagaaaagataaaaataccat
ggcagtgcacaggtacattctggctgacacgacaccgacttctagaatgt
caaatgctcagaaacaccacctcacatgactaaaatatgcatgtcatttt
ttttcatatgctgtgctaatgtcataggatataaactctcttacatattc
gagaatcatttgggtcattttttagaatttgaaactgagagcaactgttt
tcatcctttgtttaaagagcaatgagacagcgcttttagctaatctgctc
aataggaagttgataaaataattaatttaatatatctagtaaattagatt
gtagaaaggctagagaaatcttatatatttcaaatatataatacatttaa
ttatgcaatgtaaaaaatatttcacataataattatgagccaaaagataa
gttaccaactagagagatacatctgctatttatatcacaataatacttgt
agcagttgattctaccaaattttttgtatataaaattttctcattaaaac
actgcttttcaaaagaaaccttctaaatatcatccaataggggactgatt
cattatataataattaaatgtgaaccaaataactgttcctgccctcccta
gacccccgcaaggattggcagattattttattccacagttgaaactcttg
gcctgtctttgtctttgtgagggattggaaagcagccatgccattcatct
gcattttctgttcgtgctgtttcactcaggacagcagctgagcagctaca
ctttgactggactgactgctttcattttcttccgagcttcaagaataagc
tgacctgtggattcatcactccacccccatgtaactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_54134004_54134967
seq2: B6Ng01-067E14.b_55_1020 (reverse)

seq1  CCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATTCTTACCTGAG-  49
      |||||| |||||  |||| ||  ||||||||||||| |||||||||||| 
seq2  CCCCATAAAAAATAGGGGTTCGAAGCTAAACAAAGATTTCTTACCTGAGA  50

seq1  GAATACTGAATGGCTGAGAAACACCTG-AAAAAAATGTTCGGCATCCTTA  98
      |||||||  |||||||||||||||||| ||||||| ||||||||||||||
seq2  GAATACTTGATGGCTGAGAAACACCTGAAAAAAAAGGTTCGGCATCCTTA  100

seq1  ATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCATCTCACACT  148
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCATCAGGGAAATGCAAATCAAAACAACCCT-AGATTCCATCTCACACT  149

seq1  AGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGAGAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGAGAG  199

seq1  GATGTGGAGAAAGAGGAACAGAGCTAGACTTTTAAAGTGTCCATTGAGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGAGAAAGAGGAACAGAGCTAGACTTTTAAAGTGTCCATTGAGAT  249

seq1  ATCAGTTGTTAATGTTATAGATTTTTTAAATGTAGCTTGTGGTTTTTCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTGTTAATGTTATAGATTTTTTAAATGTAGCTTGTGGTTTTTCCA  299

seq1  TCACTTCCTTTATTACCCCTTCCTTGTTTGTTTTCTTGATATTTAATATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCTTTATTACCCCTTCCTTGTTTGTTTTCTTGATATTTAATATT  349

seq1  TTATCAGCAATATGCTATGGGGAGTGTTTTTTGTGCTTTATATTTTGTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGCAATATGCTATGGGGAGTGTTTTTTGTGCTTTATATTTTGTAT  399

seq1  TCTCTGTGCTTTTGTTTTTTATCTGTTTGGGTGTGTTTTGCCTTAATATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGCTTTTGTTTTTTATCTGTTTGGGTGTGTTTTGCCTTAATATA  449

seq1  GATGGTCTGTAAATGCATTCATACTAAGTGTACTACTAAATTTTATTATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTGTAAATGCATTCATACTAAGTGTACTACTAAATTTTATTATG  499

seq1  GAGTTAGTCATAGCTAACCTTAGCCCAATACCTAAAAGATGGCACATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGTCATAGCTAACCTTAGCCCAATACCTAAAAGATGGCACATAAA  549

seq1  ATTTTTCAATCTTAATAGAAATTAATATTTATGTCAAGAAATATTATTGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAATCTTAATAGAAATTAATATTTATGTCAAGAAATATTATTGC  599

seq1  AGTTCTACACTAACAACACAGCAAGAATTAAAAACTATACTCAAGAAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACACTAACAACACAGCAAGAATTAAAAACTATACTCAAGAAATT  649

seq1  CAAGAAATTATTGACTGTCTACTGTGCAACATATTTTATGATGGAAACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATTATTGACTGTCTACTGTGCAACATATTTTATGATGGAAACTT  699

seq1  ATTCTATTTTATAGCCCTCCACAGTTCTAGCATAAAAAGTCGAATTTTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTTATAGCCCTCCACAGTTCTAGCATAAAAAGTCGAATTTTAT  749

seq1  GTACCTAAGTTTATCTGCTATGTACCAATCCATGGTCTTATCAATAAACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTAAGTTTATCTGCTATGTACCAATCCATGGTCTTATCAATAAACC  799

seq1  AATCCAATTAGTCCTTAGAAGTCCACTGGAAAAAATGACAGATTGTGAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATTAGTCCTTAGAAGTCCACTGGAAAAAATGACAGATTGTGAGT  849

seq1  TCCTTTTGTTCATCCTCACCCTTCATATAGTTCTGAATTAGCACCCACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGTTCATCCTCACCCTTCATATAGTTCTGAATTAGCACCCACTG  899

seq1  CTGCCATGTGGAGATTTTTATACGGACTAGGATTGCTACCATAAA-CATG  947
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CTGCCATGTGGAGATTTTTATACGGACTAGGATTGCTACCATAAAGGATG  949

seq1  TTCTTGATGTTCCAAAA  964
      |||||||||||||||||
seq2  TTCTTGATGTTCCAAAA  966

seq1: chr14_53922074_53923221
seq2: B6Ng01-067E14.g_71_1208

seq1  GAATTCCAGGGGCAGCCTCATCAATCTGTTCTACTTGGCTTCAGGAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGCAGCCTCATCAATCTGTTCTACTTGGCTTCAGGAACAA  50

seq1  AGGAGAATGGGAGGCTAAAGTCAGCATTTGATTCTAAGGAGCGCTACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGGGAGGCTAAAGTCAGCATTTGATTCTAAGGAGCGCTACAGC  100

seq1  ACCCTGCACATCAGGGATGCCCAGCTGGAGGACTCAGGCACTTACTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCACATCAGGGATGCCCAGCTGGAGGACTCAGGCACTTACTTCTG  150

seq1  TGCTGCTGAGGCACAGTGCTCCCAGCAAGGCTGGAGCCTGGCCCCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGAGGCACAGTGCTCCCAGCAAGGCTGGAGCCTGGCCCCAAACT  200

seq1  GCAGCTGAGTGTGCAGCTCCAGTCCCCGCCTTGCACAGCTGGGGCTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGAGTGTGCAGCTCCAGTCCCCGCCTTGCACAGCTGGGGCTTCAT  250

seq1  CAGATTTCTACCAGTCACAGGGAAGATGTGAGAAAAGATAAAAATACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTACCAGTCACAGGGAAGATGTGAGAAAAGATAAAAATACCAT  300

seq1  GGCAGTGCACAGGTACATTCTGGCTGACACGACACCGACTTCTAGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGCACAGGTACATTCTGGCTGACACGACACCGACTTCTAGAATGT  350

seq1  CAAATGCTCAGAAACACCACCTCACATGACTAAAATATGCATGTCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCTCAGAAACACCACCTCACATGACTAAAATATGCATGTCATTTT  400

seq1  TTTTCATATGCTGTGCTAATGTCATAGGATATAAACTCTCTTACATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATGCTGTGCTAATGTCATAGGATATAAACTCTCTTACATATTC  450

seq1  GAGAATCATTTGGGTCATTTTTTAGAATTTGAAACTGAGAGCAACTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCATTTGGGTCATTTTTTAGAATTTGAAACTGAGAGCAACTGTTT  500

seq1  TCATCCTTTGTTTAAAGAGCAATGAGACAGCGCTTTTAGCTAATCTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTTGTTTAAAGAGCAATGAGACAGCGCTTTTAGCTAATCTGCTC  550

seq1  AATAGGAAGTTGATAAAATAATTAATTTAATATATCTAGTAAATTAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAGTTGATAAAATAATTAATTTAATATATCTAGTAAATTAGATT  600

seq1  GTAGAAAGGCTAGAGAAATCTTATATATTTCAAATATATAATACATTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAGGCTAGAGAAATCTTATATATTTCAAATATATAATACATTTAA  650

seq1  TTATGCAATGTAAAAAATATTTCACATAATAATTATGAGCCAAAAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAATGTAAAAAATATTTCACATAATAATTATGAGCCAAAAGATAA  700

seq1  GTTACCAACTAGAGAGATACATCTGCTATTTATATCACAATAATACTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAACTAGAGAGATACATCTGCTATTTATATCACAATAATACTTGT  750

seq1  AGCAGTTGATTCTACCAAA-TTTTTGTATATAAAA-TTTCTCATTAAAAC  798
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  AGCAGTTGATTCTACCAAATTTTTTGTATATAAAATTTTCTCATTAAAAC  800

seq1  ACTGC-TTTCAAAAGAAACCTTCTAAATATCATCCAATAGGGGACTGATT  847
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTTCAAAAGAAACCTTCTAAATATCATCCAATAGGGGACTGATT  850

seq1  CATTATATAATAATTAAATGTGAACCAAATAACTGTTCCTGCCCTCCCTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATAATAATTAAATGTGAACCAAATAACTGTTCCTGCCCTCCCTA  900

seq1  GACCCCCGCAAGGATTGGCAGATTATTTTATTCCACAGTTGAAAACTC-T  946
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GACCCCCGCAAGGATTGGCAGATTATTTTATTCCACAGTTG-AAACTCTT  949

seq1  GGCCTGTCTTTGTCTCTGTGAGGGATTGGAAAGCAGCCATGCCATTCATT  996
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  GGCCTGTCTTTGTCTTTGTGAGGGATTGGAAAGCAGCCATGCCATTCAT-  998

seq1  CCTGCATTGTCTGTCCGTTGCTGTTTTCACTCAGGAACAGCAGCTGAGCA  1046
       ||||||| ||||| || ||||| ||||||||||| ||||||||||||||
seq2  -CTGCATTTTCTGTTCG-TGCTG-TTTCACTCAGG-ACAGCAGCTGAGCA  1044

seq1  GCTACAACTGTGACTGGACTGACTGCCTTCCATTTTCTTTCTCGAGCTTC  1096
      ||||| ||| ||||||||||||||| ||| |||||||||   ||||||||
seq2  GCTAC-ACTTTGACTGGACTGACTG-CTTTCATTTTCTT--CCGAGCTTC  1090

seq1  ACAGATTAGCTGACCCCTTGT-GATTCATCAGCCCCACCCCCACTGTAAC  1145
      |   || ||||||||   ||| ||||||||| | ||||||||| ||||||
seq2  AAGAATAAGCTGACC---TGTGGATTCATCA-CTCCACCCCCA-TGTAAC  1135

seq1  TAC  1148
      |||
seq2  TAC  1138